ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal8a10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK111787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095H18, full insert sequence Length = 1941 Score = 325 bits (164), Expect = 1e-85 Identities = 375/444 (84%), Gaps = 1/444 (0%) Strand = Plus / Minus Query: 238 tgctatgtggattcttccaactcttctccaaagcgctccagccttgacacctcagcgtcg 297 ||||||||||| ||||| |||||||||||||| || || |||||||||||||| || || Sbjct: 1584 tgctatgtggactcttctaactcttctccaaatcgatcaagccttgacacctctgcatca 1525 Query: 298 tagtcacggatgagagcgtgtttgatcgaaccgtcatcctcgctcgcgtgtatctgcctc 357 || |||||||| ||||| || ||||| ||||||||||| || ||||| || || || || Sbjct: 1524 taatcacggatcagagcatggttgatagaaccgtcatcttcactcgcctggatttgattc 1465 Query: 358 ccaccaaaccatcttccgttcatcttctctacgcatttgagaccatctttgcggtctttg 417 ||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 1464 ccaccaaaccatcttccattcatcttctctatgcatttgataccatctttccggtctttg 1405 Query: 418 aattttaccaatacaactccttgtggatgattttcacaaaccttgacattgtcgatcaga 477 ||||| ||||| | ||| || | ||||||||||||||| ||||||||||| || | || Sbjct: 1404 aatttcaccaaaataacaccctctggatgattttcacagaccttgacattatcaactgga 1345 Query: 478 ccaaacttcacacattcctctctaacatctacctcaagttcaggaagaagggtttcatca 537 |||| ||||| ||||| |||||||||||| ||||||| || |||||||| |||||||| Sbjct: 1344 ccaagcttcatgcattcttctctaacatctgcctcaagctcgggaagaagagtttcatcg 1285 Query: 538 tttctcaattcagcaggactgaacatattcgccaaaatcaccctgagtaggaatcatcac 597 || ||||||||||||| ||||||||| | |||||| || | ||| | |||| |||| Sbjct: 1284 gctcgcaattcagcaggagtgaacatatgcctcaaaataactgt-agttgtaatcgtcac 1226 Query: 598 cttcttatcatcatgtccaccccatcccagcatcttatcttcaaccttcttgcctttctt 657 |||||| |||||||||||||||||||| || || ||||| ||||| |||||| |||| | Sbjct: 1225 cttcttgtcatcatgtccaccccatcctagaattttatcctcaactttcttggttttcct 1166 Query: 658 tttcttttgcttatctgccttctt 681 ||||||||||||||||| |||||| Sbjct: 1165 tttcttttgcttatctgtcttctt 1142
>ref|XM_473032.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 321 bits (162), Expect = 2e-84 Identities = 373/442 (84%), Gaps = 1/442 (0%) Strand = Plus / Minus Query: 240 ctatgtggattcttccaactcttctccaaagcgctccagccttgacacctcagcgtcgta 299 ||||||||| ||||| |||||||||||||| || || |||||||||||||| || || || Sbjct: 1431 ctatgtggactcttctaactcttctccaaatcgatcaagccttgacacctctgcatcata 1372 Query: 300 gtcacggatgagagcgtgtttgatcgaaccgtcatcctcgctcgcgtgtatctgcctccc 359 |||||||| ||||| || ||||| ||||||||||| || ||||| || || || |||| Sbjct: 1371 atcacggatcagagcatggttgatagaaccgtcatcttcactcgcctggatttgattccc 1312 Query: 360 accaaaccatcttccgttcatcttctctacgcatttgagaccatctttgcggtctttgaa 419 ||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 1311 accaaaccatcttccattcatcttctctatgcatttgataccatctttccggtctttgaa 1252 Query: 420 ttttaccaatacaactccttgtggatgattttcacaaaccttgacattgtcgatcagacc 479 ||| ||||| | ||| || | ||||||||||||||| ||||||||||| || | |||| Sbjct: 1251 tttcaccaaaataacaccctctggatgattttcacagaccttgacattatcaactggacc 1192 Query: 480 aaacttcacacattcctctctaacatctacctcaagttcaggaagaagggtttcatcatt 539 || ||||| ||||| |||||||||||| ||||||| || |||||||| |||||||| Sbjct: 1191 aagcttcatgcattcttctctaacatctgcctcaagctcgggaagaagagtttcatcggc 1132 Query: 540 tctcaattcagcaggactgaacatattcgccaaaatcaccctgagtaggaatcatcacct 599 || ||||||||||||| ||||||||| | |||||| || | ||| | |||| |||||| Sbjct: 1131 tcgcaattcagcaggagtgaacatatgcctcaaaataactgt-agttgtaatcgtcacct 1073 Query: 600 tcttatcatcatgtccaccccatcccagcatcttatcttcaaccttcttgcctttctttt 659 |||| |||||||||||||||||||| || || ||||| ||||| |||||| |||| ||| Sbjct: 1072 tcttgtcatcatgtccaccccatcctagaattttatcctcaactttcttggttttccttt 1013 Query: 660 tcttttgcttatctgccttctt 681 ||||||||||||||| |||||| Sbjct: 1012 tcttttgcttatctgtcttctt 991
>gb|AY107982.1| Zea mays PCO075833 mRNA sequence Length = 617 Score = 178 bits (90), Expect = 2e-41 Identities = 222/266 (83%) Strand = Plus / Plus Query: 241 tatgtggattcttccaactcttctccaaagcgctccagccttgacacctcagcgtcgtag 300 |||||||||||||| |||||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 348 tatgtggattcttctaactcttctccaaatcggtccagtcttgacacctctgcatcgtaa 407 Query: 301 tcacggatgagagcgtgtttgatcgaaccgtcatcctcgctcgcgtgtatctgcctccca 360 |||||||| |||| || || | ||||| ||||| || ||||| || || ||| |||| Sbjct: 408 tcacggataagagtatggttaacagaaccatcatcttcactcgcatggatttgctgccca 467 Query: 361 ccaaaccatcttccgttcatcttctctacgcatttgagaccatctttgcggtctttgaat 420 |||||||||| |||||||||||||||| ||||||| ||||||||| | ||||||||| Sbjct: 468 gcaaaccatctaccgttcatcttctctatgcatttggcaccatcttttctatctttgaat 527 Query: 421 tttaccaatacaactccttgtggatgattttcacaaaccttgacattgtcgatcagacca 480 || ||||| | || || ||||||||||||||||||||||||||||| || | ||||| Sbjct: 528 ttcaccaaaatgacaccctgtggatgattttcacaaaccttgacattatccacaggacca 587 Query: 481 aacttcacacattcctctctaacatc 506 ||||| | ||||||||||||||||| Sbjct: 588 aacttgatgcattcctctctaacatc 613
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 103 bits (52), Expect = 8e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 365 accatcttccgttcatcttctctacgcatttgagaccatctttgcggtctttgaatttta 424 |||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||| | Sbjct: 24814258 accatcttccattcatcttctctatgcatttgataccatctttccggtctttgaatttca 24814199 Query: 425 ccaatacaactccttgtggatgattttcacaaacct 460 |||| | ||| || | ||||||||||||||| |||| Sbjct: 24814198 ccaaaataacaccctctggatgattttcacagacct 24814163 Score = 99.6 bits (50), Expect = 1e-17 Identities = 110/130 (84%) Strand = Plus / Minus Query: 238 tgctatgtggattcttccaactcttctccaaagcgctccagccttgacacctcagcgtcg 297 ||||||||||| ||||| |||||||||||||| || || |||||||||||||| || || Sbjct: 24814664 tgctatgtggactcttctaactcttctccaaatcgatcaagccttgacacctctgcatca 24814605 Query: 298 tagtcacggatgagagcgtgtttgatcgaaccgtcatcctcgctcgcgtgtatctgcctc 357 || |||||||| ||||| || ||||| ||||||||||| || ||||| || || || || Sbjct: 24814604 taatcacggatcagagcatggttgatagaaccgtcatcttcactcgcctggatttgattc 24814545 Query: 358 ccaccaaacc 367 |||||||||| Sbjct: 24814544 ccaccaaacc 24814535 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 616 accccatcccagcatcttatcttcaaccttcttgcctttctttttcttttgcttatctgc 675 ||||||||| || || ||||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 24812470 accccatcctagaattttatcctcaactttcttggttttccttttcttttgcttatctgt 24812411 Query: 676 cttctt 681 |||||| Sbjct: 24812410 cttctt 24812405 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 476 gaccaaacttcacacattcctctctaacatctacctcaagttcaggaagaagggtttcat 535 |||||| ||||| ||||| |||||||||||| ||||||| || |||||||| ||||||| Sbjct: 24813219 gaccaagcttcatgcattcttctctaacatctgcctcaagctcgggaagaagagtttcat 24813160 Query: 536 c 536 | Sbjct: 24813159 c 24813159 Score = 48.1 bits (24), Expect = 0.039 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 543 caattcagcaggactgaacatattcgccaaaatcaccctgagtaggaatcatcaccttct 602 ||||||||||||| ||||||||| | |||||| || | ||| | |||| ||||||||| Sbjct: 24813002 caattcagcaggagtgaacatatgcctcaaaataactgt-agttgtaatcgtcaccttct 24812944 Query: 603 tatcatcatgtccacc 618 | |||||||||||||| Sbjct: 24812943 tgtcatcatgtccacc 24812928
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 103 bits (52), Expect = 8e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 365 accatcttccgttcatcttctctacgcatttgagaccatctttgcggtctttgaatttta 424 |||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||| | Sbjct: 75974 accatcttccattcatcttctctatgcatttgataccatctttccggtctttgaatttca 75915 Query: 425 ccaatacaactccttgtggatgattttcacaaacct 460 |||| | ||| || | ||||||||||||||| |||| Sbjct: 75914 ccaaaataacaccctctggatgattttcacagacct 75879 Score = 99.6 bits (50), Expect = 1e-17 Identities = 110/130 (84%) Strand = Plus / Minus Query: 238 tgctatgtggattcttccaactcttctccaaagcgctccagccttgacacctcagcgtcg 297 ||||||||||| ||||| |||||||||||||| || || |||||||||||||| || || Sbjct: 76380 tgctatgtggactcttctaactcttctccaaatcgatcaagccttgacacctctgcatca 76321 Query: 298 tagtcacggatgagagcgtgtttgatcgaaccgtcatcctcgctcgcgtgtatctgcctc 357 || |||||||| ||||| || ||||| ||||||||||| || ||||| || || || || Sbjct: 76320 taatcacggatcagagcatggttgatagaaccgtcatcttcactcgcctggatttgattc 76261 Query: 358 ccaccaaacc 367 |||||||||| Sbjct: 76260 ccaccaaacc 76251 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 616 accccatcccagcatcttatcttcaaccttcttgcctttctttttcttttgcttatctgc 675 ||||||||| || || ||||| ||||| |||||| |||| |||||||||||||||||| Sbjct: 74186 accccatcctagaattttatcctcaactttcttggttttccttttcttttgcttatctgt 74127 Query: 676 cttctt 681 |||||| Sbjct: 74126 cttctt 74121 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 476 gaccaaacttcacacattcctctctaacatctacctcaagttcaggaagaagggtttcat 535 |||||| ||||| ||||| |||||||||||| ||||||| || |||||||| ||||||| Sbjct: 74935 gaccaagcttcatgcattcttctctaacatctgcctcaagctcgggaagaagagtttcat 74876 Query: 536 c 536 | Sbjct: 74875 c 74875 Score = 48.1 bits (24), Expect = 0.039 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 543 caattcagcaggactgaacatattcgccaaaatcaccctgagtaggaatcatcaccttct 602 ||||||||||||| ||||||||| | |||||| || | ||| | |||| ||||||||| Sbjct: 74718 caattcagcaggagtgaacatatgcctcaaaataactgt-agttgtaatcgtcaccttct 74660 Query: 603 tatcatcatgtccacc 618 | |||||||||||||| Sbjct: 74659 tgtcatcatgtccacc 74644
>emb|AJ299246.1|NTA299246 Nicotiana tabacum partial mRNA for hypothetical protein (ORF1), clone 3aT7 Length = 763 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 418 aattttaccaatacaactccttgtggatgattttcacaaacctt 461 ||||| ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 83 aatttgaccaaaacaaccccttgtggatgattttcgcacacctt 40
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 162 ttttctgttttgttcttgtataatttc 188 |||| |||||||||||||||||||||| Sbjct: 8969539 ttttatgttttgttcttgtataatttc 8969565
>dbj|AP005801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0045M11 Length = 159148 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 162 ttttctgttttgttcttgtataatttc 188 |||| |||||||||||||||||||||| Sbjct: 129846 ttttatgttttgttcttgtataatttc 129872
>dbj|AP005780.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0051H02 Length = 136520 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 162 ttttctgttttgttcttgtataatttc 188 |||| |||||||||||||||||||||| Sbjct: 13135 ttttatgttttgttcttgtataatttc 13161
>emb|AL450317.13| Mouse DNA sequence from clone RP23-467E4 on chromosome 9, complete sequence Length = 184651 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 637 ttcaaccttcttgcctttctttt 659 ||||||||||||||||||||||| Sbjct: 91978 ttcaaccttcttgcctttctttt 91956
>gb|AC010211.10| Drosophila melanogaster clone BACR26C09, complete sequence Length = 177855 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 652 tttctttttcttttgcttatct 673 |||||||||||||||||||||| Sbjct: 50055 tttctttttcttttgcttatct 50076
>gb|BC068955.1| Xenopus laevis hypothetical protein MGC83228, mRNA (cDNA clone MGC:83228 IMAGE:6635611), complete cds Length = 3638 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctt 663 |||||||||||||||||||||| Sbjct: 787 ccttcttgcctttctttttctt 766
>gb|AC111145.7| Mus musculus chromosome 1, clone RP23-373L1, complete sequence Length = 165789 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 ctcttttctgttttgttcttgt 180 |||||||||||||||||||||| Sbjct: 72365 ctcttttctgttttgttcttgt 72344
>emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chromosome 9 Contains the 3' end of a novel gene, complete sequence Length = 188357 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 644 ttcttgcctttctttttctttt 665 |||||||||||||||||||||| Sbjct: 86947 ttcttgcctttctttttctttt 86968
>ref|NM_141372.1| Drosophila melanogaster Osiris 10 CG15593-RB, transcript variant B (Osi10), mRNA Length = 2226 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 652 tttctttttcttttgcttatct 673 |||||||||||||||||||||| Sbjct: 1665 tttctttttcttttgcttatct 1644
>gb|AC016445.4| Drosophila melanogaster, chromosome 3R, region 83D-83F, BAC clone BACR19H03, complete sequence Length = 157141 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 652 tttctttttcttttgcttatct 673 |||||||||||||||||||||| Sbjct: 123525 tttctttttcttttgcttatct 123546
>gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 of 118 of the complete sequence Length = 292632 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 652 tttctttttcttttgcttatct 673 |||||||||||||||||||||| Sbjct: 225022 tttctttttcttttgcttatct 225001
>dbj|AP006711.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09H02, TM0593b, complete sequence Length = 10381 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 651 ctttctttttcttttgcttatc 672 |||||||||||||||||||||| Sbjct: 3102 ctttctttttcttttgcttatc 3081
>gb|AC108424.14| Mus musculus chromosome 7, clone RP23-105A10, complete sequence Length = 198191 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tcttttctgttttgttcttgt 180 ||||||||||||||||||||| Sbjct: 33709 tcttttctgttttgttcttgt 33689
>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence Length = 197242 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 642 ccttcttgcctttctttttcttttg 666 ||||||| ||||||||||||||||| Sbjct: 58731 ccttctttcctttctttttcttttg 58755
>ref|XM_952987.1| Neurospora crassa OR74A hypothetical protein (NCU07789.1) partial mRNA Length = 1146 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 639 caaccttcttgcctttctttttctt 663 |||||||||| |||||||||||||| Sbjct: 853 caaccttcttccctttctttttctt 829
>ref|XM_328494.1| Neurospora crassa OR74A hypothetical protein (NCU07789.1) partial mRNA Length = 1146 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 639 caaccttcttgcctttctttttctt 663 |||||||||| |||||||||||||| Sbjct: 853 caaccttcttccctttctttttctt 829
>ref|XM_716436.1| Candida albicans SC5314 hypothetical protein (CaO19_3031), mRNA Length = 882 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 643 cttcttgcctttctttttctt 663 ||||||||||||||||||||| Sbjct: 741 cttcttgcctttctttttctt 721
>ref|XM_716165.1| Candida albicans SC5314 hypothetical protein (CaO19_10549), mRNA Length = 882 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 643 cttcttgcctttctttttctt 663 ||||||||||||||||||||| Sbjct: 741 cttcttgcctttctttttctt 721
>gb|AC091728.2| Bos taurus clone RP42-99M11, complete sequence Length = 162743 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 642 ccttcttgcctttctttttcttttg 666 ||||||||| ||||||||||||||| Sbjct: 145583 ccttcttgcatttctttttcttttg 145607
>gb|AC089992.2| Bos taurus clone RP42-210F11, complete sequence Length = 147922 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 642 ccttcttgcctttctttttcttttg 666 ||||||||| ||||||||||||||| Sbjct: 14577 ccttcttgcatttctttttcttttg 14601
>ref|XM_452996.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C17820g predicted mRNA Length = 1947 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 415 ttgaattttaccaatacaactccttgtgg 443 ||||||||||| ||||| ||||||||||| Sbjct: 1376 ttgaattttacaaataccactccttgtgg 1404
>gb|AC157790.10| Mus musculus chromosome 7, clone RP24-151M10, complete sequence Length = 167728 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tcttttctgttttgttcttgt 180 ||||||||||||||||||||| Sbjct: 127530 tcttttctgttttgttcttgt 127510
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 642 ccttcttgcctttctttttcttttg 666 ||||||||| ||||||||||||||| Sbjct: 1242750 ccttcttgcatttctttttcttttg 1242774
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 tccagccttgacacctcagcg 294 ||||||||||||||||||||| Sbjct: 1696357 tccagccttgacacctcagcg 1696377
>gb|AC127329.3| Mus musculus BAC clone RP23-260A24 from 8, complete sequence Length = 183639 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 635 tcttcaaccttcttgcctttctttttctt 663 |||||||||||||| |||| ||||||||| Sbjct: 134287 tcttcaaccttcttcccttcctttttctt 134315
>ref|XM_644166.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (326.t00001) partial mRNA Length = 930 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 645 tcttgcctttctttttcttttgctt 669 ||||| ||||||||||||||||||| Sbjct: 353 tcttgactttctttttcttttgctt 329
>ref|XM_646713.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (146.t00009) partial mRNA Length = 930 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 645 tcttgcctttctttttcttttgctt 669 ||||| ||||||||||||||||||| Sbjct: 353 tcttgactttctttttcttttgctt 329
>gb|AC161824.6| Mus musculus 6 BAC RP23-62E9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 263206 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 catggcaaaatgctaatctct 43 ||||||||||||||||||||| Sbjct: 13226 catggcaaaatgctaatctct 13206
>emb|AL449083.23| Human DNA sequence from clone RP11-434N3 on chromosome 9, complete sequence Length = 128945 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 639 caaccttcttgcctttctttttctt 663 |||||| |||||||||||||||||| Sbjct: 117519 caacctccttgcctttctttttctt 117495
>ref|XM_795059.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC581850 (LOC581850), mRNA Length = 1673 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 643 cttcttgcctttctttttctt 663 ||||||||||||||||||||| Sbjct: 720 cttcttgcctttctttttctt 700
>emb|Z25809.1|BMHKATPAS B.marinus mRNA for H,K-ATPase Length = 3673 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 638 tcaaccttcttgcctttctttttcttttg 666 ||||| |||||||||||||| |||||||| Sbjct: 376 tcaacattcttgcctttcttcttcttttg 348
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 415 ttgaattttaccaatacaactccttgtgg 443 ||||||||||| ||||| ||||||||||| Sbjct: 1587939 ttgaattttacaaataccactccttgtgg 1587967
>emb|AL513410.1|NC104H10 Neurospora crassa DNA linkage group VI Cosmid contig 104H10 Length = 108061 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 639 caaccttcttgcctttctttttctt 663 |||||||||| |||||||||||||| Sbjct: 100357 caaccttcttccctttctttttctt 100333
>gb|AC087256.9| Homo sapiens 12q BAC RP11-443N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149546 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 645 tcttgcctttctttttctttt 665 ||||||||||||||||||||| Sbjct: 99363 tcttgcctttctttttctttt 99383
>gb|AF332664.1|AF332664 Bothrops alternatus clone BA5 Bov-B LINE, complete sequence Length = 1746 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 ttcttgcctttctttttcttt 664 ||||||||||||||||||||| Sbjct: 632 ttcttgcctttctttttcttt 612
>ref|XM_625467.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_30), partial mRNA Length = 2958 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 645 tcttgcctttctttttctttt 665 ||||||||||||||||||||| Sbjct: 1994 tcttgcctttctttttctttt 1974
>emb|BX470077.5| Zebrafish DNA sequence from clone CH211-136P17 in linkage group 5, complete sequence Length = 165851 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 ttttctgttttgttcttgtat 182 ||||||||||||||||||||| Sbjct: 81305 ttttctgttttgttcttgtat 81285
>gb|AC153880.6| Mus musculus 6 BAC RP23-384J7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 189970 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 catggcaaaatgctaatctct 43 ||||||||||||||||||||| Sbjct: 102545 catggcaaaatgctaatctct 102565
>gb|AC021868.17|AC021868 Homo sapiens 12 BAC RP11-679N16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168227 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 645 tcttgcctttctttttctttt 665 ||||||||||||||||||||| Sbjct: 35675 tcttgcctttctttttctttt 35655
>gb|AC019209.3|AC019209 Homo sapiens BAC clone RP11-443N24 from Sequence-12, complete sequence Length = 196817 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 645 tcttgcctttctttttctttt 665 ||||||||||||||||||||| Sbjct: 146634 tcttgcctttctttttctttt 146654
>emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-388E23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 206533 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 tgctcttttctgttttgttct 177 ||||||||||||||||||||| Sbjct: 168935 tgctcttttctgttttgttct 168955
>emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-66N24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196311 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 tgctcttttctgttttgttct 177 ||||||||||||||||||||| Sbjct: 192537 tgctcttttctgttttgttct 192517
>emb|AL928818.8| Mouse DNA sequence from clone RP23-309M6 on chromosome 2, complete sequence Length = 69399 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tcttttctgttttgttcttgt 180 ||||||||||||||||||||| Sbjct: 36609 tcttttctgttttgttcttgt 36629
>ref|NM_105382.3| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/ nucleotide binding AT1G67120 mRNA, complete cds Length = 16171 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 aaaatgctaatctctgtaat 48 |||||||||||||||||||| Sbjct: 6719 aaaatgctaatctctgtaat 6738
>gb|AY446396.1| Cicer arietinum microsatellite R 129 sequence Length = 567 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 239 cctttctttttcttttgctt 220
>gb|AY446388.1| Cicer arietinum microsatellite T53 sequence Length = 456 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 277 cctttctttttcttttgctt 258
>gb|AY446383.1| Cicer arietinum microsatellite V165 sequence Length = 408 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 343 cctttctttttcttttgctt 362
>gb|U29187.1| Mus musculus long incubation prion protein (Prnpb) and prion-like protein (Prnd) genes, complete cds Length = 39760 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctttt 665 ||||||| |||||||||||||||| Sbjct: 5751 ccttctttcctttctttttctttt 5728
>gb|U29186.1|MUSPRNPA Mus musculus short incubation prion protein Prnpa gene, complete cds Length = 38418 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctttt 665 ||||||| |||||||||||||||| Sbjct: 8159 ccttctttcctttctttttctttt 8136
>gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosome 9, complete sequence Length = 176237 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cttttctgttttgttcttgt 180 |||||||||||||||||||| Sbjct: 124929 cttttctgttttgttcttgt 124948
>gb|BC058700.1| Mus musculus one cut domain, family member 3, mRNA (cDNA clone MGC:65585 IMAGE:6850438), complete cds Length = 4705 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 652 tttctttttcttttgcttat 671 |||||||||||||||||||| Sbjct: 4276 tttctttttcttttgcttat 4295
>ref|XM_675854.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7677.2), mRNA Length = 1554 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 643 cttcttgcctttctttttct 662 |||||||||||||||||||| Sbjct: 1395 cttcttgcctttctttttct 1376
>ref|NM_139226.3| Mus musculus one cut domain, family member 3 (Onecut3), mRNA Length = 4705 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 652 tttctttttcttttgcttat 671 |||||||||||||||||||| Sbjct: 4276 tttctttttcttttgcttat 4295
>gb|AC113540.12| Mus musculus chromosome 17, clone RP23-158F13, complete sequence Length = 219781 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 26784 cctttctttttcttttgctt 26765
>gb|AC145592.3| Mus musculus BAC clone RP24-335F16 from chromosome y, complete sequence Length = 167384 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 attttcacaaaccttgacat 466 |||||||||||||||||||| Sbjct: 87109 attttcacaaaccttgacat 87128
>gb|AY255888.1| Cicer arietinum clone A2 microsatellite sequence Length = 482 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 24 cctttctttttcttttgctt 5
>gb|AY255885.1| Cicer arietinum clone F117 microsatellite sequence Length = 569 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 278 cctttctttttcttttgctt 297
>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence Length = 170350 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 ttgcctttctttttcttttg 666 |||||||||||||||||||| Sbjct: 166481 ttgcctttctttttcttttg 166500
>emb|CT025612.11| Mouse DNA sequence from clone RP23-430O20 on chromosome 9, complete sequence Length = 185954 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctttt 665 ||||||| |||||||||||||||| Sbjct: 115751 ccttctttcctttctttttctttt 115728
>gb|AC125044.3| Mus musculus BAC clone RP23-348B10 from chromosome 17, complete sequence Length = 222615 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 71482 cctttctttttcttttgctt 71501
>gb|AC123841.4| Mus musculus BAC clone RP23-400M7 from chromosome 13, complete sequence Length = 203062 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 catttggacaaagtttagct 77 |||||||||||||||||||| Sbjct: 69178 catttggacaaagtttagct 69159
>emb|Z73427.1|CEF58B3 Caenorhabditis elegans Cosmid F58B3, complete sequence Length = 21948 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 10276 cctttctttttcttttgctt 10295
>gb|AC124700.3| Mus musculus BAC clone RP24-199L11 from chromosome 8, complete sequence Length = 163730 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 643 cttcttgcctttctttttcttttg 666 |||||| ||||||||||||||||| Sbjct: 82948 cttctttcctttctttttcttttg 82925
>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence Length = 249008 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 36862 cctttctttttcttttgctt 36843
>gb|AC093620.3| Homo sapiens BAC clone RP13-901C16 from 7, complete sequence Length = 71183 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctttt 665 ||||||| |||||||||||||||| Sbjct: 29827 ccttctttcctttctttttctttt 29804
>gb|AC158512.2| Mus musculus BAC clone RP24-319O6 from chromosome 9, complete sequence Length = 171723 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 118329 cctttctttttcttttgctt 118310
>gb|AC140915.6| Medicago truncatula clone mth2-10l24, complete sequence Length = 120364 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ttgaattttaccaatacaac 434 |||||||||||||||||||| Sbjct: 42998 ttgaattttaccaatacaac 42979
>emb|AL583846.9| Human DNA sequence from clone RP11-421F5 on chromosome 6 Contains part of the gene for KIAA1798 protein, complete sequence Length = 54111 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 642 ccttcttgcctttctttttctttt 665 ||||||||||||||||||| |||| Sbjct: 20715 ccttcttgcctttctttttttttt 20738
>emb|AL391216.10| Human DNA sequence from clone RP11-241C9 on chromosome 1 Contains the 5' end of the ESSRG gene for estrogen-related receptor gamma and two CpG islands, complete sequence Length = 101542 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cagctgctcttttctgtttt 172 |||||||||||||||||||| Sbjct: 55503 cagctgctcttttctgtttt 55522
>gb|AC090498.4| Homo sapiens chromosome 7 clone RP11-84E17, complete sequence Length = 188036 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctttt 665 ||||||||| |||||||||||||| Sbjct: 169723 ccttcttgcatttctttttctttt 169700
>emb|AL162430.15| Human DNA sequence from clone RP11-296A18 on chromosome 1 Contains for novel genes, a cofilin 1 (non-muscle) (CFL1) pseudogene, the RNF11 gene for ring finger protein 11, a ribosomal protein S2 (RPS2) pseudogene and the 3' end of the C1orf34 gene for chromosome 1 open reading frame 34, complete sequence Length = 211791 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 642 ccttcttgcctttctttttctttt 665 ||||||| |||||||||||||||| Sbjct: 138138 ccttctttcctttctttttctttt 138161
>gb|AC105024.8| Homo sapiens chromosome 17, clone CTD-2132N18, complete sequence Length = 147662 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 645 tcttgcctttctttttcttt 664 |||||||||||||||||||| Sbjct: 121379 tcttgcctttctttttcttt 121398
>emb|AL954353.14| Mouse DNA sequence from clone RP23-156D8 on chromosome 11 Contains a pseudogene similar to part of striatin (calmodulin binding protein) (Strn), complete sequence Length = 188920 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 atctgcctcccaccaaaccatctt 372 ||||| |||||||||||||||||| Sbjct: 164667 atctgactcccaccaaaccatctt 164690
>emb|AL603984.7| Mouse DNA sequence from clone RP23-137B16 on chromosome 11 Contains a novel gene, the 5' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two Cpg islands, complete sequence Length = 224602 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 catgttagcatggcaaaatg 34 |||||||||||||||||||| Sbjct: 29318 catgttagcatggcaaaatg 29337
>gb|AC118277.5| Homo sapiens BAC clone RP11-580L23 from 4, complete sequence Length = 15674 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gattcttccaactcttctcc 266 |||||||||||||||||||| Sbjct: 5946 gattcttccaactcttctcc 5965
>emb|BX546460.6| Zebrafish DNA sequence from clone RP71-84C10, complete sequence Length = 143360 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ctcttttctgttttgttctt 178 |||||||||||||||||||| Sbjct: 93704 ctcttttctgttttgttctt 93723
>gb|AC022206.3| Homo sapiens BAC clone RP11-545E8 from 16, complete sequence Length = 183224 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 537 atttctcaattcagcaggactgaa 560 |||||| ||||||||||||||||| Sbjct: 69926 atttctaaattcagcaggactgaa 69949
>gb|AC074177.34| Mus musculus strain C57BL/6J clone rp23-157n16 map 9, complete sequence Length = 195013 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctttt 665 ||||||| |||||||||||||||| Sbjct: 131623 ccttctttcctttctttttctttt 131600
>gb|AC021698.12| Homo sapiens chromosome 11, clone RP11-430L3, complete sequence Length = 201673 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 644 ttcttgcctttctttttcttttgc 667 ||||||||||| |||||||||||| Sbjct: 89473 ttcttgcctttttttttcttttgc 89450
>gb|AC173430.3| Cavia porcellus clone CH234-9K24, complete sequence Length = 147675 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 652 tttctttttcttttgcttatctgc 675 ||||||| |||||||||||||||| Sbjct: 123214 tttctttatcttttgcttatctgc 123237
>gb|AC006559.6| Homo sapiens 12p12 BAC RPCI11-501E24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179444 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 645 tcttgcctttctttttcttt 664 |||||||||||||||||||| Sbjct: 93369 tcttgcctttctttttcttt 93388
>gb|AC098656.2| Homo sapiens chromosome 1 clone RP11-297I23, complete sequence Length = 172210 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 cagcaggactgaacatattc 567 |||||||||||||||||||| Sbjct: 147092 cagcaggactgaacatattc 147111
>gb|AC090359.6| Homo sapiens chromosome 18, clone RP11-785M10, complete sequence Length = 221086 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 646 cttgcctttctttttcttttgctt 669 ||||||||||| |||||||||||| Sbjct: 139643 cttgcctttctatttcttttgctt 139666
>gb|AC067982.6| Homo sapiens chromosome 8, clone RP11-125E23, complete sequence Length = 147875 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ctcttttctgttttgttctt 178 |||||||||||||||||||| Sbjct: 140748 ctcttttctgttttgttctt 140729
>gb|AY946008.1| Homo sapiens peripheral clock protein 2 (ERIH2) mRNA, complete cds Length = 5526 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 aacttcacacattcctctct 500 |||||||||||||||||||| Sbjct: 509 aacttcacacattcctctct 490
>gb|AY946007.1| Homo sapiens peripheral clock protein 1 (ERIH1) mRNA, complete cds Length = 1569 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 aacttcacacattcctctct 500 |||||||||||||||||||| Sbjct: 509 aacttcacacattcctctct 490
>gb|AC034159.7| Homo sapiens BAC clone RP11-344G13 from 4, complete sequence Length = 202555 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 645 tcttgcctttctttttcttt 664 |||||||||||||||||||| Sbjct: 33342 tcttgcctttctttttcttt 33361
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 658 tttcttttgcttatctgccttctttgcc 685 |||||||| ||| ||||||||||||||| Sbjct: 347972 tttctttttcttctctgccttctttgcc 347945
>dbj|AB168516.1| Macaca fascicularis testis cDNA clone: QtsA-12711, similar to human hypothetical protein FLJ35757 (FLJ35757), mRNA, RefSeq: NM_152598.1 Length = 2410 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 gtggattcttccaactcttctcca 267 ||||||||||||||||| |||||| Sbjct: 1321 gtggattcttccaactcctctcca 1344
>gb|AC129887.3| Atelerix albiventris clone LB4-416G11, complete sequence Length = 169193 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 658 tttcttttgcttatctgccttctttgcc 685 |||||||| ||| ||||||||||||||| Sbjct: 144041 tttctttttcttctctgccttctttgcc 144014
>gb|AC004146.1|AC004146 Arabidopsis thaliana chromosome I BAC F5A8, complete sequence Length = 101933 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 aaaatgctaatctctgtaat 48 |||||||||||||||||||| Sbjct: 37400 aaaatgctaatctctgtaat 37381
>ref|NM_069794.3| Caenorhabditis elegans F58B3.4 (F58B3.4) mRNA, complete cds Length = 1967 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 1499 cctttctttttcttttgctt 1480
>gb|AC090517.2|AC090517 Homo sapiens chromosome 15 clone RP11-31H5 map 15q21.3, complete sequence Length = 185446 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 atggcaaaatgctaatctctgtaa 47 |||||||||||||||| ||||||| Sbjct: 63162 atggcaaaatgctaatgtctgtaa 63185
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 cagtcatatagtatgaataatcgg 138 |||||||||| ||||||||||||| Sbjct: 4869995 cagtcatataatatgaataatcgg 4869972
>gb|AC025828.3|AC025828 Homo sapiens, clone RP11-13I24, complete sequence Length = 152843 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ctcttttctgttttgttctt 178 |||||||||||||||||||| Sbjct: 41745 ctcttttctgttttgttctt 41726
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tttgaattttaccaatacaa 433 |||||||||||||||||||| Sbjct: 448690 tttgaattttaccaatacaa 448671
>gb|AC091137.23| Homo sapiens chromosome 18, clone RP11-755G16, complete sequence Length = 106659 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 646 cttgcctttctttttcttttgctt 669 ||||||||||| |||||||||||| Sbjct: 53388 cttgcctttctatttcttttgctt 53365
>gb|AC016909.9| Homo sapiens BAC clone RP11-458A7 from 2, complete sequence Length = 155535 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 aacttcacacattcctctct 500 |||||||||||||||||||| Sbjct: 60439 aacttcacacattcctctct 60458
>gb|AC009179.17|AC009179 Homo sapiens chromosome 7 clone RP11-228I4, complete sequence Length = 179405 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 642 ccttcttgcctttctttttctttt 665 ||||||||| |||||||||||||| Sbjct: 108373 ccttcttgcatttctttttctttt 108396
>gb|AC084511.1|CBRG17D06 Caenorhabditis briggsae cosmid G17D06, complete sequence Length = 46394 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 645 tcttgcctttctttttcttt 664 |||||||||||||||||||| Sbjct: 26213 tcttgcctttctttttcttt 26194
>gb|AC073263.5| Homo sapiens BAC clone RP11-287D1 from 2, complete sequence Length = 183279 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 agctgctcttttctgttttgttct 177 |||| ||||||||||||||||||| Sbjct: 87462 agcttctcttttctgttttgttct 87439
>gb|AC144611.2| Homo sapiens fosmid clone XXFOS-89066G9 from 2, complete sequence Length = 12965 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctttt 665 ||||||| |||||||||||||||| Sbjct: 9161 ccttcttccctttctttttctttt 9138
>gb|AC156288.5| Mus musculus 6 BAC RP24-246G10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166923 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ctcttttctgttttgttctt 178 |||||||||||||||||||| Sbjct: 40384 ctcttttctgttttgttctt 40365
>gb|AC152943.1| Mus musculus 10 BAC RP23-225G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198492 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ctcttttctgttttgttctt 178 |||||||||||||||||||| Sbjct: 9461 ctcttttctgttttgttctt 9480
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 cagtcatatagtatgaataatcgg 138 |||||||||| ||||||||||||| Sbjct: 29249 cagtcatataatatgaataatcgg 29226
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 cagtcatatagtatgaataatcgg 138 |||||||||| ||||||||||||| Sbjct: 74789 cagtcatataatatgaataatcgg 74766
>emb|AL732322.10| Mouse DNA sequence from clone RP23-234H9 on chromosome X, complete sequence Length = 114453 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 641 accttcttgcctttctttttcttt 664 |||||||||||||||| ||||||| Sbjct: 62682 accttcttgcctttctctttcttt 62705
>gb|AC132387.4| Mus musculus BAC clone RP23-440M14 from 1, complete sequence Length = 193449 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 169403 cctttctttttcttttgctt 169384
>emb|BX950217.14| Zebrafish DNA sequence from clone DKEY-192L17 in linkage group 4, complete sequence Length = 157921 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atgaataatcggacaaacagatga 150 |||||||| ||||||||||||||| Sbjct: 10387 atgaataaacggacaaacagatga 10364
>dbj|AP002841.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-239P2, complete sequence Length = 176485 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 89448 cctttctttttcttttgctt 89467
>gb|AC108805.15| Mus musculus chromosome 9, clone RP23-226G13, complete sequence Length = 242531 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 10756 cctttctttttcttttgctt 10775
>gb|U52821.1|MMU52821 Mus musculus prion (PrP) gene, exons 1 and 2 Length = 3508 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctttt 665 ||||||| |||||||||||||||| Sbjct: 723 ccttctttcctttctttttctttt 700
>gb|AC142557.3| Cercopithecus aethiops clone CH252-402M4, complete sequence Length = 150854 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tttgaattttaccaatacaa 433 |||||||||||||||||||| Sbjct: 63383 tttgaattttaccaatacaa 63364
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 646 cttgcctttctttttctttt 665 |||||||||||||||||||| Sbjct: 90298 cttgcctttctttttctttt 90279
>gb|AC003104.1|AC003104 Homo sapiens chromosome 17, clone HCIT48C15, complete sequence Length = 100635 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 645 tcttgcctttctttttcttt 664 |||||||||||||||||||| Sbjct: 38710 tcttgcctttctttttcttt 38691
>gb|CP000213.1| Drosophila melanogaster genomic scaffold 211000022280725 Length = 226945 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 642 ccttcttgcctttctttttc 661 |||||||||||||||||||| Sbjct: 191158 ccttcttgcctttctttttc 191177
>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3, complete sequence Length = 134390 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 47678 cctttctttttcttttgctt 47697
>gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, complete sequence Length = 182101 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttttgttcttgtataatttc 188 |||||||||||||||||||| Sbjct: 92237 ttttgttcttgtataatttc 92218
>gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, complete sequence Length = 203369 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 ttcaggaagaagggtttcat 535 |||||||||||||||||||| Sbjct: 54480 ttcaggaagaagggtttcat 54499
>dbj|AP000729.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-699D4, complete sequence Length = 160535 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 103905 cctttctttttcttttgctt 103886
>gb|AC152058.8| Mus musculus BAC clone RP24-327D15 from chromosome 10, complete sequence Length = 204754 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 652 tttctttttcttttgcttat 671 |||||||||||||||||||| Sbjct: 95189 tttctttttcttttgcttat 95208
>emb|AL928986.6| Mouse DNA sequence from clone RP23-477P12 on chromosome X, complete sequence Length = 156731 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 642 ccttcttgcctttctttttctttt 665 ||||| |||||||||||||||||| Sbjct: 82345 ccttcatgcctttctttttctttt 82368
>emb|AL627103.13| Mouse DNA sequence from clone RP23-414M10 on chromosome 4, complete sequence Length = 194995 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 cctttctttttcttttgctt 669 |||||||||||||||||||| Sbjct: 137697 cctttctttttcttttgctt 137678
>emb|AL833794.9| Mouse DNA sequence from clone RP23-401J24 on chromosome 2, complete sequence Length = 206549 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 642 ccttcttgcctttctttttctttt 665 ||||||| |||||||||||||||| Sbjct: 107597 ccttctttcctttctttttctttt 107574
>gb|AC087309.10| Homo sapiens 12 BAC RP11-545J16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146677 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 648 tgcctttctttttcttttgcttat 671 |||| ||||||||||||||||||| Sbjct: 137190 tgcccttctttttcttttgcttat 137213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,780,198 Number of Sequences: 3902068 Number of extensions: 7780198 Number of successful extensions: 297925 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 297008 Number of HSP's gapped (non-prelim): 913 length of query: 687 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 664 effective length of database: 17,143,297,704 effective search space: 11383149675456 effective search space used: 11383149675456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
