ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal26p06 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 270 bits (690), Expect = 2e-72 Identities = 132/142 (92%), Positives = 137/142 (96%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGS Sbjct: 191 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGS 250 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 TGYDNAVALPAGGRGDEEEL KENVKN SSSTG ITLSVT+SKPETGEVIGVFES+QPSD Sbjct: 251 TGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSD 310 Query: 252 TDLGAKAPKDVKIQGVWYAQLE 187 TDLGAK PKDVKIQG+WYAQLE Sbjct: 311 TDLGAKVPKDVKIQGIWYAQLE 332
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 269 bits (687), Expect = 5e-72 Identities = 131/142 (92%), Positives = 137/142 (96%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSG +LVPSYRGSSFLDPKGRGGS Sbjct: 188 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGS 247 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 GYDNAVALPAGGRGDEEEL KEN+K+ SSSTG ITLSVTKSKPETGEVIGVFES+QPSD Sbjct: 248 AGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSD 307 Query: 252 TDLGAKAPKDVKIQGVWYAQLE 187 TDLG+KAPKDVKIQG+WYAQLE Sbjct: 308 TDLGSKAPKDVKIQGIWYAQLE 329
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 266 bits (681), Expect = 3e-71 Identities = 130/142 (91%), Positives = 136/142 (95%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGS Sbjct: 188 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGS 247 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 TGYDNAVALPAGGRGDEEEL KENVKN +S TG ITLSVT+SKPETGEVIGVFES+QPSD Sbjct: 248 TGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSD 307 Query: 252 TDLGAKAPKDVKIQGVWYAQLE 187 TDLGAK PKDVKIQG+WYAQLE Sbjct: 308 TDLGAKVPKDVKIQGIWYAQLE 329
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 263 bits (671), Expect = 4e-70 Identities = 129/143 (90%), Positives = 137/143 (95%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKP+SFSG FLVPSYRGSSFLDPKGRG S Sbjct: 187 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGAS 246 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 TGYDNAVALPAGGRGDEEEL KEN K+A+SS G ITLSVT++KPETGEVIGVFES+QPSD Sbjct: 247 TGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSD 306 Query: 252 TDLGAKAPKDVKIQGVWYAQLES 184 TDLGAKAPKDVKIQGVWYAQLES Sbjct: 307 TDLGAKAPKDVKIQGVWYAQLES 329
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 261 bits (668), Expect = 9e-70 Identities = 136/144 (94%), Positives = 137/144 (95%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 KDGIDYAAVTVQLPGGERV FLFTVKQLVATGKPESF PFLVPSYRGSSFLDPKGRGGS Sbjct: 185 KDGIDYAAVTVQLPGGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGS 243 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 TGYDNA ALP GGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD Sbjct: 244 TGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 303 Query: 252 TDLGAKAPKDVKIQGVWYAQLESN 181 TDL +APKDVKIQGVWYAQLESN Sbjct: 304 TDL--EAPKDVKIQGVWYAQLESN 325
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 261 bits (666), Expect = 1e-69 Identities = 128/142 (90%), Positives = 134/142 (94%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGS Sbjct: 189 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGS 248 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 TGYDNAVALPAGGRGDEEEL KEN KN +SS G ITLSVT SKPETGEVIGVF+S+QPSD Sbjct: 249 TGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSD 308 Query: 252 TDLGAKAPKDVKIQGVWYAQLE 187 TDLGAK PKDVKI+GVWYAQLE Sbjct: 309 TDLGAKVPKDVKIEGVWYAQLE 330
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 260 bits (665), Expect = 2e-69 Identities = 127/143 (88%), Positives = 134/143 (93%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPESFS FLVPSYRGSSFLDPKGRGGS Sbjct: 191 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGS 250 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 TGYDNAVALPAGGRGDEEEL KENVKN +S TG IT +VTKS P+TGEVIGVFES+QPSD Sbjct: 251 TGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSD 310 Query: 252 TDLGAKAPKDVKIQGVWYAQLES 184 TDLGAK PKDVKIQG+WYAQLES Sbjct: 311 TDLGAKTPKDVKIQGIWYAQLES 333
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 260 bits (664), Expect = 3e-69 Identities = 126/142 (88%), Positives = 134/142 (94%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 +DGIDYAAVTVQLPGGERVPFLFTVKQL A+GKPESFSG FLVPSYRGSSFLDPKGRGGS Sbjct: 190 EDGIDYAAVTVQLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGS 249 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 TGYDNAVALPAGGRGDEEEL+KENVKN ++S G ITL +TKSKPETGEVIGVFES+QPSD Sbjct: 250 TGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSD 309 Query: 252 TDLGAKAPKDVKIQGVWYAQLE 187 TDLGAK PKDVKIQGVWY Q+E Sbjct: 310 TDLGAKVPKDVKIQGVWYGQIE 331
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 258 bits (659), Expect = 1e-68 Identities = 126/142 (88%), Positives = 133/142 (93%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 +DGIDYAAVTVQLPGGERVPFLFTVKQL A+GKP+SF+G FLVPSYRGSSFLDPKGRGGS Sbjct: 191 EDGIDYAAVTVQLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGS 250 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 TGYDNAVALPAGGRGDEEEL KENVKN ++S G ITL VTKSKPETGEVIGVFES+QPSD Sbjct: 251 TGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSD 310 Query: 252 TDLGAKAPKDVKIQGVWYAQLE 187 TDLGAK PKDVKIQGVWY QLE Sbjct: 311 TDLGAKVPKDVKIQGVWYGQLE 332
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 198 bits (504), Expect = 9e-51 Identities = 99/141 (70%), Positives = 109/141 (77%) Frame = -2 Query: 609 DGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGST 430 DGIDYAA TVQLPGGERV FLFT+KQ G + G FLVPSYRGSSFLDPKGRGGST Sbjct: 153 DGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGST 212 Query: 429 GYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDT 250 GYDNAVALPA R D EEL KENVK + G+ SV K P TGE+ GVFES+QPSDT Sbjct: 213 GYDNAVALPA--RADAEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDT 270 Query: 249 DLGAKAPKDVKIQGVWYAQLE 187 DLGAK PKD+K+ G+WYAQL+ Sbjct: 271 DLGAKPPKDIKVTGLWYAQLK 291
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 196 bits (497), Expect = 6e-50 Identities = 95/141 (67%), Positives = 110/141 (78%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 KDG+DYAA TVQL GGERVPFLFT+K L+A G F G F VPSYRG++FLDPKGRGG+ Sbjct: 196 KDGLDYAATTVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGA 255 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 +GYD AVALPA GD+EE AKEN K+ ++S G I V K ETGE+ GVFES+QPSD Sbjct: 256 SGYDTAVALPAS--GDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSD 313 Query: 252 TDLGAKAPKDVKIQGVWYAQL 190 TDLGAK PKD+K GVWYAQ+ Sbjct: 314 TDLGAKVPKDIKTSGVWYAQI 334
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 196 bits (497), Expect = 6e-50 Identities = 97/141 (68%), Positives = 109/141 (77%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 433 +DGIDYAA TVQLPGGERV FLFT+KQ G ++ G F+VPSYRGSSFLDPKGRGGS Sbjct: 153 EDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGS 212 Query: 432 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 253 TGYDNAVALPA R D EEL KENVK+ + G+ SV K TGE+ GVFES+QPSD Sbjct: 213 TGYDNAVALPA--RADAEELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSD 270 Query: 252 TDLGAKAPKDVKIQGVWYAQL 190 TDLGAK PKD+KI G+WY QL Sbjct: 271 TDLGAKPPKDIKITGLWYGQL 291
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 172 bits (437), Expect = 5e-43 Identities = 87/150 (58%), Positives = 109/150 (72%), Gaps = 8/150 (5%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFL 457 KDG+D+ A+TVQLPGGERVPFLFT+K LVA +P F G F VPSYRG++FL Sbjct: 126 KDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFL 185 Query: 456 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 277 DPKGRG +GYDNAVALPA + D+E+L + NVK A G I+L + K +GE+ G Sbjct: 186 DPKGRGVVSGYDNAVALPA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGT 243 Query: 276 FESVQPSDTDLGAKAPKDVKIQGVWYAQLE 187 FES QPSDTDLGA PK+VKI+G++YA++E Sbjct: 244 FESEQPSDTDLGADEPKEVKIRGIFYARVE 273
>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 275 Score = 158 bits (400), Expect = 1e-38 Identities = 85/147 (57%), Positives = 104/147 (70%), Gaps = 8/147 (5%) Frame = -2 Query: 606 GIDYAAVTVQLPGGERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDP 451 GID+ VTVQLPGGE+VPF FT+K LV +P F G F VPSYRG++FLDP Sbjct: 129 GIDFQPVTVQLPGGEQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDP 188 Query: 450 KGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFE 271 KGRG +TGYDNAVALPA D+E+ A NVK G+I+L VTK TGE+ GVF+ Sbjct: 189 KGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFD 244 Query: 270 SVQPSDTDLGAKAPKDVKIQGVWYAQL 190 S QPSDTDLGAK P +VKI+G++YA++ Sbjct: 245 SEQPSDTDLGAKEPVEVKIRGIFYARV 271
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 154 bits (389), Expect = 2e-37 Identities = 82/150 (54%), Positives = 104/150 (69%), Gaps = 8/150 (5%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFL 457 +DGID+ VTVQ+ GGER+P LFTVK LVA+ +P F G F VPSYR ++FL Sbjct: 124 EDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFL 183 Query: 456 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 277 DPKGRG ++GYD+A+ALP + EEELA+ NVK S + G I+L+V K TGE+ G Sbjct: 184 DPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGT 240 Query: 276 FESVQPSDTDLGAKAPKDVKIQGVWYAQLE 187 FES Q SD D+GA P +VKIQGV+YA +E Sbjct: 241 FESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 154 bits (389), Expect = 2e-37 Identities = 82/150 (54%), Positives = 104/150 (69%), Gaps = 8/150 (5%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFL 457 +DGID+ VTVQ+ GGER+P LFTVK LVA+ +P F G F VPSYR ++FL Sbjct: 124 EDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFL 183 Query: 456 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 277 DPKGRG ++GYD+A+ALP + EEELA+ NVK S + G I+L+V K TGE+ G Sbjct: 184 DPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGT 240 Query: 276 FESVQPSDTDLGAKAPKDVKIQGVWYAQLE 187 FES Q SD D+GA P +VKIQGV+YA +E Sbjct: 241 FESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 277 Score = 149 bits (376), Expect = 6e-36 Identities = 81/150 (54%), Positives = 104/150 (69%), Gaps = 8/150 (5%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVA-TGKPES-------FSGPFLVPSYRGSSFL 457 K GID+ A+TV LPGGE VPFLFTVK LVA T +P + G + VPSYR S+FL Sbjct: 126 KGGIDFQAITVLLPGGEEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFL 185 Query: 456 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 277 DPK RG +TGY++AVA+P+ G D E+L KENVK + G I+L+V+K TGEV GV Sbjct: 186 DPKARGLTTGYESAVAIPSAG--DAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGV 243 Query: 276 FESVQPSDTDLGAKAPKDVKIQGVWYAQLE 187 F ++QPSDTD+G K DVK+ G +Y ++E Sbjct: 244 FTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273
>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 274 Score = 147 bits (371), Expect = 2e-35 Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 8/152 (5%) Frame = -2 Query: 612 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFL 457 KDGID+ +TV LPGGE VPF FTVK T +P F G F VPSYRG+ FL Sbjct: 127 KDGIDFQPITVLLPGGEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFL 186 Query: 456 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 277 DPK RG TGYDNAVALP+ + + N K G ++L VT+ TGE+ G+ Sbjct: 187 DPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGI 241 Query: 276 FESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 181 FES QPSDTDLGAK P DVK++G++Y +++++ Sbjct: 242 FESEQPSDTDLGAKEPLDVKVRGIFYGRVDTD 273
>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit| of oxygen evolving system of photosystem II) (33 kDa thylakoid membrane protein) (Fragments) Length = 26 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 450 KGRGGSTGYDNAVALPAGGR 391 + +GGSTGYDNAVALPAGGR Sbjct: 7 QSKGGSTGYDNAVALPAGGR 26
>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 34.3 bits (77), Expect = 0.29 Identities = 23/54 (42%), Positives = 28/54 (51%) Frame = -2 Query: 375 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 214 +AKE K G + SV K KP+TGEVI V E + G K P +VKI Sbjct: 13 VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 31.2 bits (69), Expect = 2.5 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 414 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 238 V A G EEE A+ K G + L T SKP+ EVIG FES VQ GA Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129 Query: 237 KAP 229 AP Sbjct: 130 VAP 132
>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 2) Length = 662 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -2 Query: 396 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 262 G+ E + +N+KN+ NI T S PET E+I +Q Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449
>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)| Length = 560 Score = 30.4 bits (67), Expect = 4.2 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = -2 Query: 492 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 328 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 327 TLSVTKSKP 301 T + + P Sbjct: 489 TGHLEEPMP 497
>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)| Length = 536 Score = 30.4 bits (67), Expect = 4.2 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = -2 Query: 492 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 328 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 327 TLSVTKSKP 301 T + + P Sbjct: 489 TGHLEEPMP 497
>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1) Length = 373 Score = 30.0 bits (66), Expect = 5.6 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 264 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 133 QP + KD+K++G W +Q + N S E K ILI C IR Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336
>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) (Fragment) Length = 319 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -2 Query: 546 FTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYD 421 F + + A PES +G +VP Y+ S++ +G G TGY+ Sbjct: 5 FATRAIHAGQDPESVTGAVIVPIYQTSTYAQ-RGVGDHTGYE 45
>H1_EUPES (Q9M5W4) Histone H1| Length = 229 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2 Query: 579 QLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGS 466 QLP R LF +K+LVA+GK F +PS R + Sbjct: 86 QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAA 123
>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA| Length = 598 Score = 29.6 bits (65), Expect = 7.2 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = +2 Query: 140 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 319 +A ++ IFT + D W++ ++ + V D TL++ P P+ G V Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292 Query: 320 LRV---MLPVEEDAFFTF 364 +V + PV D + F Sbjct: 293 PQVYAGLFPVSSDDYEAF 310
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = +2 Query: 80 YTHKHIVASILSSPPTNPRMHAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSD 259 Y H S ++ PP P + Q+M+ TS+ ++ PW +S A+ P + S Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528 Query: 260 GCTLSKTPITSPVSGLL 310 + S + +SP + ++ Sbjct: 529 ASSSSSSSASSPAAAVV 545
>PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 687 Score = 29.3 bits (64), Expect = 9.5 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = -2 Query: 474 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 295 RGS+F GG G A AGG G + A + K+A S S ++ P Sbjct: 460 RGSAFTSVSQLGGGGGAGTAGT--AGGSGGGQTAASDERKSAFSQPAR---SFSQLSPLV 514 Query: 294 -GEVIGVFESVQPSD----TDL--GAKAPKDVKIQG 208 G+ +G E P D T L A P VK+QG Sbjct: 515 LGQKLGALEPCHPGDGVGPTRLYPAAADPLAVKLQG 550
>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) Length = 373 Score = 29.3 bits (64), Expect = 9.5 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 264 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 139 QP + KD+K++G W +Q + N S E K LI C Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,684,276 Number of Sequences: 219361 Number of extensions: 1279224 Number of successful extensions: 4898 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4716 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4879 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
