>FBS1_HUMAN (P62706) Fibrosin-1|
          Length = 177

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 258 CAWHCGDRRGCLVPIFFLVLQTFLPFRTREPWS 356
           CAW CG  RG     + L+  TF P R   PW+
Sbjct: 37  CAWECGSSRG----PWGLLRYTFAPVRACRPWA 65

>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
           (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -1

Query: 266 PCTFILMHNRATLSGIIFGPETLALADEDIGTRFARGRKHL*AGLC 129
           P ++ L+ N+   SG IF PE L +  ED+  +F +G  +L A +C
Sbjct: 182 PFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL-AAVC 226

>CLPP3_PROMA (Q7V9L6) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 216

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 257 MCMALR**ARMFGSYLLPGPAN--LLAVPNTRALVSSPLSKVQARATTLPI 403
           MC  L   A   G++LL G +    LA+PN+R ++  PL   Q +A  + I
Sbjct: 113 MCYGL---AASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEI 160

>CLPP3_PROMP (Q7UZK7) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 215

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 281 ARMFGSYLLPGPAN--LLAVPNTRALVSSPLSKVQARATTLPI 403
           A   G++LL G A    LA+PN+R ++  PL   Q +A  + I
Sbjct: 117 AASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEI 159

>UME6_YEAST (P39001) Transcriptional regulator UME6 (Negative transcriptional|
           regulator of IME2)
          Length = 836

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
 Frame = -2

Query: 361 ATDQGSRVRNGKKVCRTRKKIGTKH-------PRLSPQCHAHSF 251
           +T QG+R R G  +CR RKK  T+         RL   CH  +F
Sbjct: 760 STSQGTRSRTGCWICRLRKKKCTEERPHCFNCERLKLDCHYDAF 803

>PAAE_ECOLI (P76081) Probable phenylacetic acid degradation NADH oxidoreductase|
           paaE (EC 1.-.-.-)
          Length = 356

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 451 SREAKALDGQPTQSLRDRQRGRPGLHLRQGATDQGSRVRNGKKVCRT 311
           +R+A  +     Q L++  R RPG HL   A+  G  +R    +CR+
Sbjct: 16  TRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSICRS 62

>CLPP3_PROMT (Q46ID4) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 194

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 281 ARMFGSYLLPG--PANLLAVPNTRALVSSPLSKVQARATTLPI 403
           A   G++LL G      LA+PN+R ++  PL   Q +A  + I
Sbjct: 94  AASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVEIEI 136

>E1BL_ADEM1 (P12536) E1B protein, large T-antigen (55 kDa protein)|
          Length = 433

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 246 HQNECAWHCGDRRGCLVPIFFLVLQTFLPFRTR 344
           H  EC   CG R   L P    +  T +P RTR
Sbjct: 389 HSRECQCFCGGRHRLLFPSVVHITPTVVPDRTR 421

>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0|
          Length = 318

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 284 APITAMPCTFILMHNRATLSGIIFGPETLALADEDIGTRFARG 156
           A +   P ++ L+      SG +F PE L L ++D+  +FA G
Sbjct: 178 AKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASG 220

>HYIN1_AGRVI (Q04557) Indoleacetamide hydrolase (EC 3.5.1.-) (IAH)|
           (Indole-3-acetamide hydrolase)
          Length = 462

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 49  IQSVSLSPWFYVLISSQLHRLQLQQYVHKPAYRCFLPR 162
           IQ++   P  Y L+ SQL +  + + V++ A RC+ PR
Sbjct: 319 IQNIQ-DPQVYDLVQSQLSKGLISESVYRRALRCYKPR 355

>CLPP_DESDG (Q30Z79) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 200

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 281 ARMFGSYLLPG--PANLLAVPNTRALVSSPLSKVQARATTLPI 403
           A   G++LL    P    A+PN+R ++  P+   Q +AT + I
Sbjct: 95  AASMGAFLLAAGQPGMRFALPNSRIMIHQPMGGAQGQATDIDI 137


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,079,630
Number of Sequences: 219361
Number of extensions: 1137890
Number of successful extensions: 3023
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3023
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)