ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal8a08 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 332 bits (851), Expect = 5e-91 Identities = 162/162 (100%), Positives = 162/162 (100%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR Sbjct: 303 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 362 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT Sbjct: 363 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 422 Query: 241 GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 116 GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 423 GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 259 bits (663), Expect = 3e-69 Identities = 123/162 (75%), Positives = 142/162 (87%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKR Sbjct: 313 IGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKR 372 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+ Sbjct: 373 LVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGR 432 Query: 241 GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 116 G+FYGKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 433 GTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 259 bits (661), Expect = 5e-69 Identities = 123/164 (75%), Positives = 142/164 (86%), Gaps = 2/164 (1%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV G++ IGK+ Sbjct: 313 IGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKK 372 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K Sbjct: 373 LVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKR 432 Query: 241 GSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 116 G+FYG A Q G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 433 GTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 255 bits (651), Expect = 8e-68 Identities = 120/160 (75%), Positives = 139/160 (86%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVC GIF+TD V E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+ Sbjct: 311 IGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKK 370 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+ Sbjct: 371 LVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDR 430 Query: 241 GSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 122 G+F+GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 431 GTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 224 bits (570), Expect = 2e-58 Identities = 105/126 (83%), Positives = 118/126 (93%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG G+ENI KR Sbjct: 300 IGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKR 359 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKT Sbjct: 360 LVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKT 419 Query: 241 GSFYGK 224 G+FYGK Sbjct: 420 GAFYGK 425
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 220 bits (561), Expect = 2e-57 Identities = 103/125 (82%), Positives = 117/125 (93%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 +GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV TG+ENIGKR Sbjct: 303 VGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKR 362 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKT Sbjct: 363 LVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKT 422 Query: 241 GSFYG 227 GSFYG Sbjct: 423 GSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 209 bits (532), Expect = 5e-54 Identities = 97/125 (77%), Positives = 115/125 (92%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+ G+++IGK+ Sbjct: 313 IGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKK 372 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM T Sbjct: 373 LVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNT 432 Query: 241 GSFYG 227 G+FYG Sbjct: 433 GTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 208 bits (530), Expect = 8e-54 Identities = 96/124 (77%), Positives = 115/124 (92%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV TG+ENI ++ Sbjct: 309 IGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARK 368 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKT Sbjct: 369 LVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKT 428 Query: 241 GSFY 230 GSF+ Sbjct: 429 GSFF 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 207 bits (528), Expect = 1e-53 Identities = 100/123 (81%), Positives = 113/123 (91%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV TGIE IG + Sbjct: 317 IGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDK 376 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ T Sbjct: 377 LLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINT 436 Query: 241 GSF 233 G+F Sbjct: 437 GNF 439
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 206 bits (524), Expect = 4e-53 Identities = 99/121 (81%), Positives = 113/121 (93%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV TGIE IG++ Sbjct: 312 IGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEK 371 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ T Sbjct: 372 LLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINT 431 Query: 241 G 239 G Sbjct: 432 G 432
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 206 bits (523), Expect = 5e-53 Identities = 95/123 (77%), Positives = 113/123 (91%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV G++ IGK+ Sbjct: 313 IGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKK 372 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K Sbjct: 373 LVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKR 432 Query: 241 GSF 233 G+F Sbjct: 433 GTF 435
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 202 bits (513), Expect = 8e-52 Identities = 98/124 (79%), Positives = 108/124 (87%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVC GIF+TDNV E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV TGIE IG + Sbjct: 317 IGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDK 376 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+ Sbjct: 377 LLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINN 436 Query: 241 GSFY 230 GSF+ Sbjct: 437 GSFF 440
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 196 bits (497), Expect = 6e-50 Identities = 87/124 (70%), Positives = 113/124 (91%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 +GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+ G++ GK+ Sbjct: 315 VGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKK 374 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+ Sbjct: 375 LVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKS 434 Query: 241 GSFY 230 GSF+ Sbjct: 435 GSFF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 189 bits (479), Expect = 7e-48 Identities = 85/124 (68%), Positives = 111/124 (89%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVCKGIF+TD V ++ +V++VD PGQSIDFFGALRARVYDDEVRKW+ G++++GK+ Sbjct: 317 IGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKK 376 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKT 242 LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+ Sbjct: 377 LVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKS 436 Query: 241 GSFY 230 GSF+ Sbjct: 437 GSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 157 bits (398), Expect = 2e-38 Identities = 73/100 (73%), Positives = 86/100 (86%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IG+C GIF+TD V E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW G+E IG+ Sbjct: 310 IGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRN 369 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 302 LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 370 LVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 133 bits (335), Expect = 3e-31 Identities = 67/110 (60%), Positives = 81/110 (73%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 IGVC GIFQ DNV V +VDTFPGQSIDFFGALRARVYDD VR+W+ TG++ IG++ Sbjct: 286 IGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQ 345 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 272 LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y+S A L Sbjct: 346 LVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 104 bits (259), Expect = 2e-22 Identities = 46/104 (44%), Positives = 69/104 (66%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 +G+ GIF D +S V K+VD+FP QSIDFF ALR+R+YD+++R ++ G EN+ R Sbjct: 186 VGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLR 245 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 290 +VNS +GP F++P T+ L+E + +V EQ ++ QL D Y Sbjct: 246 VVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 96.7 bits (239), Expect = 5e-20 Identities = 44/104 (42%), Positives = 67/104 (64%) Frame = -3 Query: 601 IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKR 422 +G+ GIF D +S + ++VDTFP QSIDFF ALR+R+YD ++R ++ G E I R Sbjct: 186 VGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLR 245 Query: 421 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 290 +VNS + P F++P ++ L+E G++++ EQ V QL D Y Sbjct: 246 VVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/60 (45%), Positives = 30/60 (50%) Frame = -3 Query: 541 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 362 +VDTFPGQSIDFFGAL R+GP TFEQP MT+EK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = +3 Query: 189 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 365 P G+ K+P +P KE L P AW + C R+ C W + C S+ Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301 Query: 366 STVI 377 I Sbjct: 302 QAFI 305
>LEPA_HELPY (O25122) GTP-binding protein lepA| Length = 602 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = -3 Query: 544 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 365 KI+ T P S DF L+A +YD ++G+ LV DG + EQ + + Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232 Query: 364 KLLEYGHMLVQEQDNVKRV 308 ++G + + + +K++ Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251
>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)| Length = 462 Score = 30.4 bits (67), Expect = 4.1 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +2 Query: 458 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 583 P H I ++P+T E+++ L W G DD+++ L G D Sbjct: 5 PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 5.4 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 294 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 398 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 29.6 bits (65), Expect = 7.0 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -3 Query: 460 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 353 W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial| protein Length = 442 Score = 29.6 bits (65), Expect = 7.0 Identities = 19/36 (52%), Positives = 21/36 (58%) Frame = -2 Query: 242 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 135 +FL R RS R AR R K Q LRPNG E+RR Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169
>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier| family 20 member 1-B) Length = 685 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = +2 Query: 119 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 292 G++ ++AP W++VLG ++ F G + + SF GT++ +V++ Q+C+ Sbjct: 15 GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69 Query: 293 GVSKLHTLDIVLL 331 S T+ VLL Sbjct: 70 -ASIFETVGSVLL 81
>DNLI_VARV (P33798) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 9.2 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -3 Query: 337 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 170 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCV (P16272) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 9.2 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -3 Query: 337 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 170 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCC (P20492) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 9.2 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -3 Query: 337 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 170 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCA (O57250) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 9.2 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -3 Query: 337 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 170 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 366 Score = 29.3 bits (64), Expect = 9.2 Identities = 15/57 (26%), Positives = 32/57 (56%) Frame = -3 Query: 556 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 386 + +V V+T S D A+ ARV D+++ ++GS +E ++ V+ +G + ++ Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280
>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA| Length = 616 Score = 29.3 bits (64), Expect = 9.2 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Frame = +2 Query: 422 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 574 P+ N +D ADP LA LI P +V+G + GVDDL DR+V +I VG Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199 Query: 575 LEDTLA 592 D A Sbjct: 200 AADAPA 205
>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3| Length = 209 Score = 29.3 bits (64), Expect = 9.2 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Frame = -3 Query: 568 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 392 NV DE +K VDTF G +D G + + + +++W S G + G + + Sbjct: 92 NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148 Query: 391 FEQPKMTVEKLLEYGHM 341 P T + GHM Sbjct: 149 ASDPSRTFKNKRMPGHM 165
>TAL_STRP8 (P66961) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 9.2 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -3 Query: 439 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 260 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 259 QDAMKTGSFYGKGAQQGTLPVPEGCT 182 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP6 (Q5XAK4) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 9.2 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -3 Query: 439 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 260 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 259 QDAMKTGSFYGKGAQQGTLPVPEGCT 182 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP3 (P66960) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 9.2 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -3 Query: 439 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 260 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 259 QDAMKTGSFYGKGAQQGTLPVPEGCT 182 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP1 (P66959) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 9.2 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -3 Query: 439 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 260 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 259 QDAMKTGSFYGKGAQQGTLPVPEGCT 182 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,780,763 Number of Sequences: 219361 Number of extensions: 1618548 Number of successful extensions: 4827 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4706 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4824 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
