Clone Name	rbaal8a08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	1152	0.0
2	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	731	0.0
3	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	696	0.0
4	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	636	e-179
5	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	636	e-179
6	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	565	e-158
7	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	519	e-144
8	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	486	e-134
9	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	236	7e-59
10	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	236	7e-59
11	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	133	7e-28
12	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	133	7e-28
13	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	133	7e-28
14	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	133	7e-28
15	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	133	7e-28
16	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	133	7e-28
17	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	133	7e-28
18	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	133	7e-28
19	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	133	7e-28
20	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	133	7e-28
21	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	129	1e-26
22	gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas...	121	3e-24
23	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	121	3e-24
24	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	121	3e-24
25	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	119	1e-23
26	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	119	1e-23
27	gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet...	101	3e-18
28	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	98	4e-17
29	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	98	4e-17
30	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	96	2e-16
31	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	96	2e-16
32	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	96	2e-16
33	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	88	4e-14
34	emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase	80	1e-11
35	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
36	dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
37	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	68	4e-08
38	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	64	6e-07
39	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	60	9e-06
40	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	60	9e-06
41	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	60	9e-06
42	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	56	1e-04
43	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	52	0.002
44	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	52	0.002
45	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	52	0.002
46	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	52	0.002
47	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	52	0.002
48	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	52	0.002
49	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	52	0.002
50	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	52	0.002
51	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	52	0.002
52	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	52	0.002
53	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	52	0.002
54	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	52	0.002
55	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	52	0.002
56	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	52	0.002
57	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	50	0.009
58	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	50	0.009
59	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	48	0.034
60	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	48	0.034
61	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	48	0.034
62	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	44	0.53
63	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	44	0.53
64	gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl...	44	0.53
65	emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, c...	44	0.53
66	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	44	0.53
67	gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, comp...	42	2.1
68	emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom...	42	2.1
69	gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, comp...	42	2.1
70	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
71	emb|Y10657.1|CLRCAGENE C.littorale rca gene	42	2.1
72	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	42	2.1
73	emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa...	42	2.1
74	gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, comp...	42	2.1
75	gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet...	40	8.2
76	gb|U60105.1| Bos taurus large conductance calcium-activated pota...	40	8.2
77	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	40	8.2
78	ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001...	40	8.2
79	emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot...	40	8.2
80	gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet...	40	8.2
81	gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete...	40	8.2
82	gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp...	40	8.2
83	gb|AF026000.2| Sus scrofa calcium-activated potassium channel al...	40	8.2
84	gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Canc...	40	8.2
85	gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co...	40	8.2
86	ref|NM_174680.2| Bos taurus potassium large conductance calcium-...	40	8.2
87	gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti...	40	8.2
88	dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138	40	8.2
89	gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN...	40	8.2
90	gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN...	40	8.2
91	gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN...	40	8.2
92	emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ...	40	8.2
93	gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com...	40	8.2
94	ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ...	40	8.2
95	gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23...	40	8.2
96	gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone...	40	8.2

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 1152 bits (581), Expect = 0.0
 Identities = 587/589 (99%)
 Strand = Plus / Minus

                                                                        
Query: 15   aatatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggac 74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 aatatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggac 1320

                                                                        
Query: 75   ttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctg 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 ttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctg 1260

                                                                        
Query: 135  ccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttcc 194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 ccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttcc 1200

                                                                        
Query: 195  ggcacgggcaaagtaccttgctgtgctcctttaccgtagaaggaaccagtcttcatcgca 254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 ggcacgggcaaagtaccttgctgtgctcctttaccgtagaaggaaccagtcttcatcgca 1140

                                                                        
Query: 255  tcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgc 314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 tcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgc 1080

                                                                        
Query: 315  ttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtc 374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 ttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtc 1020

                                                                        
Query: 375  atctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatg 434
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 atctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatg 960

                                                                        
Query: 435  ttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtacacccgagcacgc 494
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959  ttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtacacccgagcacgc 900

                                                                        
Query: 495  agagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagac 554
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 899  agagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatctttacgacagac 840

                                                             
Query: 555  tcgtcactgacattgtcggtctggaagatacccttgcagacaccgatac 603
            ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 839  tcgtcacagacattgtcggtctggaagatacccttgcagacaccgatac 791

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  731 bits (369), Expect = 0.0
 Identities = 375/377 (99%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1363

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1303

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 1243

                                                                        
Query: 407  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 1183

                                                                        
Query: 467  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 1123

                                                                        
Query: 527  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 586
            |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1122 gaaggtgtcgacgatctttacgacagactcgtcacagacattgtcggtctggaagatacc 1063

                             
Query: 587  cttgcagacaccgatac 603
            |||||||||||||||||
Sbjct: 1062 cttgcagacaccgatac 1046



 Score =  377 bits (190), Expect = e-101
 Identities = 211/214 (98%), Gaps = 3/214 (1%)
 Strand = Plus / Minus

                                                                        
Query: 19   tatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 78
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 tatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 1625

                                                                        
Query: 79   -gtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 137
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 tgtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 1565

                                                                        
Query: 138  t-cgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 196
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 ttcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 1505

                                              
Query: 197  ca-cgggcaaagtaccttgctgtgctcctttacc 229
            || |||||||||||||||||||||||||||||||
Sbjct: 1504 catcgggcaaagtaccttgctgtgctcctttacc 1471

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  696 bits (351), Expect = 0.0
 Identities = 465/503 (92%)
 Strand = Plus / Minus

                                                                        
Query: 101  aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 160
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                                        
Query: 161  gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 220
            | ||||||||||||   ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370

                                                                        
Query: 221  tcctttaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgc 280
            |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 1369 tcctttaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgc 1310

                                                                        
Query: 281  ctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgag 340
            |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1309 ctggctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaag 1250

                                                                        
Query: 341  catgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacggg 400
            |||||| |||||||| |||| |||||| || |||||||| |||||||||||||| |||||
Sbjct: 1249 catgtggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacggg 1190

                                                                        
Query: 401  cccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgaccca 460
             ||||||||||||||||||||||||||||| |||||||| |||||||| ||    |||||
Sbjct: 1189 tccgtcccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacaccca 1130

                                                                        
Query: 461  cttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattg 520
            |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 1129 cttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactg 1070

                                                                        
Query: 521  tcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaa 580
            ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1069 tcctgggaaggtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaa 1010

                                   
Query: 581  gatacccttgcagacaccgatac 603
            ||||||||||||||| |||||||
Sbjct: 1009 gatacccttgcagacgccgatac 987

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  636 bits (321), Expect = e-179
 Identities = 363/377 (96%)
 Strand = Plus / Minus

                                                                       
Query: 227 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 accgtagaaggtaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 433

                                                                       
Query: 287 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 373

                                                                       
Query: 347 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
           ||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 372 cccgtactctagcagcttctccactgtcatctttggctgctcaaaggtcactggtccgtc 313

                                                                       
Query: 407 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 466
           |||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||
Sbjct: 312 ccgcgagttcaccagcttcttgccaatgttctcgataccggtagaggtcacccacttgcg 253

                                                                       
Query: 467 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 526
           |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 cacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatggattgtcctgg 193

                                                                       
Query: 527 gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 586
           |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 192 gaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtctggaagatacc 133

                            
Query: 587 cttgcagacaccgatac 603
           |||||||||||||||||
Sbjct: 132 cttgcagacaccgatac 116



 Score =  246 bits (124), Expect = 7e-62
 Identities = 189/208 (90%), Gaps = 7/208 (3%)
 Strand = Plus / Minus

                                                                       
Query: 28  atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 81
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 746 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 687

                                                                       
Query: 82  ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 141
           | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 686 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 628

                                                                       
Query: 142 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 201
           | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 627 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 568

                                       
Query: 202 gcaaagtaccttgctgtgctcctttacc 229
           ||||||||||||||||||| ||||||||
Sbjct: 567 gcaaagtaccttgctgtgcccctttacc 540

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  636 bits (321), Expect = e-179
 Identities = 363/377 (96%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 accgtagaaggtaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1283

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1223

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
            ||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 1222 cccgtactctagcagcttctccactgtcatctttggctgctcaaaggtcactggtccgtc 1163

                                                                        
Query: 407  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 466
            |||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||
Sbjct: 1162 ccgcgagttcaccagcttcttgccaatgttctcgataccggtagaggtcacccacttgcg 1103

                                                                        
Query: 467  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 526
            |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1102 cacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatggattgtcctgg 1043

                                                                        
Query: 527  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 586
            |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1042 gaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtctggaagatacc 983

                             
Query: 587  cttgcagacaccgatac 603
            |||||||||||||||||
Sbjct: 982  cttgcagacaccgatac 966



 Score =  246 bits (124), Expect = 7e-62
 Identities = 189/208 (90%), Gaps = 7/208 (3%)
 Strand = Plus / Minus

                                                                        
Query: 28   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 81
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537

                                                                        
Query: 82   ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 141
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478

                                                                        
Query: 142  cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 201
            | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418

                                        
Query: 202  gcaaagtaccttgctgtgctcctttacc 229
            ||||||||||||||||||| ||||||||
Sbjct: 1417 gcaaagtaccttgctgtgcccctttacc 1390

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  565 bits (285), Expect = e-158
 Identities = 285/285 (100%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7305 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 7246

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7245 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 7186

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7185 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 7126

                                                                        
Query: 407  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7125 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 7066

                                                         
Query: 467  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 511
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7065 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 7021



 Score =  426 bits (215), Expect = e-116
 Identities = 215/215 (100%)
 Strand = Plus / Minus

                                                                        
Query: 15   aatatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggac 74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7739 aatatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggac 7680

                                                                        
Query: 75   ttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctg 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7679 ttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctg 7620

                                                                        
Query: 135  ccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttcc 194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7619 ccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttcc 7560

                                               
Query: 195  ggcacgggcaaagtaccttgctgtgctcctttacc 229
            |||||||||||||||||||||||||||||||||||
Sbjct: 7559 ggcacgggcaaagtaccttgctgtgctcctttacc 7525



 Score =  184 bits (93), Expect = 2e-43
 Identities = 93/93 (100%)
 Strand = Plus / Minus

                                                                        
Query: 511  caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6880 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 6821

                                             
Query: 571  cggtctggaagatacccttgcagacaccgatac 603
            |||||||||||||||||||||||||||||||||
Sbjct: 6820 cggtctggaagatacccttgcagacaccgatac 6788



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                        
Query: 452  gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 511
            ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| |||||
Sbjct: 3812 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 3753

                                    
Query: 512  aatggattgtcctgggaaggtgtc 535
             ||||| || || |||||||||||
Sbjct: 3752 gatggactgccccgggaaggtgtc 3729



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 303  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 362
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902

                                         
Query: 363  ttctcgactgtcatctttggctgctcgaa 391
            ||||| |  |||||||| ||||| |||||
Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  519 bits (262), Expect = e-144
 Identities = 348/377 (92%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 1353 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1294

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1293 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1234

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1233 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1174

                                                                        
Query: 407  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 466
            |||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||||
Sbjct: 1173 ccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttgcg 1114

                                                                        
Query: 467  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 526
            ||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 1113 cacctcaacgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcctgg 1054

                                                                        
Query: 527  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 586
            ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1053 gaangtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaagatacc 994

                             
Query: 587  cttgcagacaccgatac 603
            ||||||||| |||||||
Sbjct: 993  cttgcagacgccgatac 977



 Score =  180 bits (91), Expect = 4e-42
 Identities = 171/195 (87%), Gaps = 7/195 (3%)
 Strand = Plus / Minus

                                                                        
Query: 42   catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 95
            ||||||||||| ||||||| |||||||||||  ||||||||      || ||||||||||
Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534

                                                                        
Query: 96   -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 154
             || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474

                                                                        
Query: 155  tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 214
            ||||||| ||||||||||||   ||||||| |||||||||||||| |||||||| |||||
Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414

                           
Query: 215  ctgtgctcctttacc 229
             ||||||||||||||
Sbjct: 1413 ttgtgctcctttacc 1399

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  486 bits (245), Expect = e-134
 Identities = 275/285 (96%)
 Strand = Plus / Minus

                                                                       
Query: 227 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 227

                                                                       
Query: 287 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 167

                                                                       
Query: 347 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
           |||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 166 cccgtactctagcagcttctcgactgtcatctttggctgctcaaaggtcactggtccgtc 107

                                                                       
Query: 407 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 466
           |||||||||||| ||| ||||||||||||||||||| |||||||||   |||||||||||
Sbjct: 106 ccgcgagttcacaagcttcttgccaatgttctcgataccggtagaggtcacccacttgcg 47

                                                        
Query: 467 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 511
           |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 46  cacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtc 2

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  236 bits (119), Expect = 7e-59
 Identities = 280/333 (84%), Gaps = 3/333 (0%)
 Strand = Plus / Minus

                                                                        
Query: 110  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                                                        
Query: 170  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 226
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1311

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
             ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1310 cccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1251

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1250 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1191

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1190 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1131

                                             
Query: 407  ccgcgagttcaccagcctcttgccaatgttctc 439
            || ||||||||||||||||||||||||||||||
Sbjct: 1130 cctcgagttcaccagcctcttgccaatgttctc 1098



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                        
Query: 456  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1081 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1022

                                                                        
Query: 516  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1021 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 962

                                     
Query: 576  tggaagatacccttgcagacaccga 600
             ||||||||||||||||||| ||||
Sbjct: 961  cggaagatacccttgcagacgccga 937

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  236 bits (119), Expect = 7e-59
 Identities = 280/333 (84%), Gaps = 3/333 (0%)
 Strand = Plus / Minus

                                                                        
Query: 110  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                                                        
Query: 170  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 226
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1346

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
             ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1345 cccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1286

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1285 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1226

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1225 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1166

                                             
Query: 407  ccgcgagttcaccagcctcttgccaatgttctc 439
            || ||||||||||||||||||||||||||||||
Sbjct: 1165 cctcgagttcaccagcctcttgccaatgttctc 1133



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                        
Query: 456  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1116 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1057

                                                                        
Query: 516  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1056 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 997

                                     
Query: 576  tggaagatacccttgcagacaccga 600
             ||||||||||||||||||| ||||
Sbjct: 996  cggaagatacccttgcagacgccga 972

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                          
Query: 110    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 170    ggcattttggtcggtgcaaccttccggcacgggca 204
              ||||    |||||||||||||||||||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                          
Query: 227    accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
              |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 108310 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 108369

                                                                          
Query: 287    catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
              || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 108370 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 108429

                                                                          
Query: 347    cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
               |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 108430 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 108489

                                               
Query: 407    ccgcgagttcaccagcctcttgccaatgttctc 439
              || ||||||||||||||||||||||||||||||
Sbjct: 108490 cctcgagttcaccagcctcttgccaatgttctc 108522



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Plus

                                                                          
Query: 513    atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 572
              |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 108688 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 108747

                                          
Query: 573    gtctggaagatacccttgcagacaccga 600
              ||  ||||||||||||||||||| ||||
Sbjct: 108748 gtgcggaagatacccttgcagacgccga 108775



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                          
Query: 128    gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 187
              ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112

                             
Query: 188    accttccggcacggg 202
               ||  ||||||||||
Sbjct: 112113 tcccgccggcacggg 112127



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 456    acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 505
              ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 108539 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 108588



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 411    gagttcaccagcctcttgccaatgttctc 439
              ||||||||||||||| |||| ||||||||
Sbjct: 112324 gagttcaccagcctcctgccgatgttctc 112352

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 110   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 170   ggcattttggtcggtgcaaccttccggcacgggca 204
             ||||    |||||||||||||||||||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                         
Query: 227   accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
             |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 30187 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 30246

                                                                         
Query: 287   catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
             || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 30247 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 30306

                                                                         
Query: 347   cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 30307 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 30366

                                              
Query: 407   ccgcgagttcaccagcctcttgccaatgttctc 439
             || ||||||||||||||||||||||||||||||
Sbjct: 30367 cctcgagttcaccagcctcttgccaatgttctc 30399



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Plus

                                                                         
Query: 513   atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 572
             |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 30565 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 30624

                                         
Query: 573   gtctggaagatacccttgcagacaccga 600
             ||  ||||||||||||||||||| ||||
Sbjct: 30625 gtgcggaagatacccttgcagacgccga 30652



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 128   gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 187
             ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989

                            
Query: 188   accttccggcacggg 202
              ||  ||||||||||
Sbjct: 33990 tcccgccggcacggg 34004



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 456   acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 505
             ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 30416 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 30465



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 411   gagttcaccagcctcttgccaatgttctc 439
             ||||||||||||||| |||| ||||||||
Sbjct: 34201 gagttcaccagcctcctgccgatgttctc 34229

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 110  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 170  ggcattttggtcggtgcaaccttccggcacgggca 204
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1315 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1256

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1255 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1196

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1195 tccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1136

                                             
Query: 407  ccgcgagttcaccagcctcttgccaatgttctc 439
            || ||||||||||||||||||||||||||||||
Sbjct: 1135 cctcgagttcaccagcctcttgccaatgttctc 1103



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                        
Query: 456  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1086 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1027

                                                                        
Query: 516  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1026 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 967

                                     
Query: 576  tggaagatacccttgcagacaccga 600
             ||||||||||||||||||| ||||
Sbjct: 966  cggaagatacccttgcagacgccga 942

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 110      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 170      ggcattttggtcggtgcaaccttccggcacgggca 204
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                            
Query: 227      accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
                |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 28303449 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 28303508

                                                                            
Query: 287      catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
                || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 28303509 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 28303568

                                                                            
Query: 347      cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
                 |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 28303569 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 28303628

                                                 
Query: 407      ccgcgagttcaccagcctcttgccaatgttctc 439
                || ||||||||||||||||||||||||||||||
Sbjct: 28303629 cctcgagttcaccagcctcttgccaatgttctc 28303661



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Plus

                                                                            
Query: 513      atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 572
                |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 28303827 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28303886

                                            
Query: 573      gtctggaagatacccttgcagacaccga 600
                ||  ||||||||||||||||||| ||||
Sbjct: 28303887 gtgcggaagatacccttgcagacgccga 28303914



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 128      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 187
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251

                               
Query: 188      accttccggcacggg 202
                 ||  ||||||||||
Sbjct: 28307252 tcccgccggcacggg 28307266



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 456      acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 505
                ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 28303678 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28303727



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 411      gagttcaccagcctcttgccaatgttctc 439
                ||||||||||||||| |||| ||||||||
Sbjct: 28307463 gagttcaccagcctcctgccgatgttctc 28307491

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 110  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                               
Query: 170  ggcattttggtcggtgcaaccttccggcacgggca 204
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggca 1420



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1309 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1250

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1249 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1190

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1189 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1130

                                             
Query: 407  ccgcgagttcaccagcctcttgccaatgttctc 439
            || ||||||||||||||||||||||||||||||
Sbjct: 1129 cctcgagttcaccagcctcttgccaatgttctc 1097



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                        
Query: 456  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1080 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1021

                                                                        
Query: 516  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1020 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 961

                                     
Query: 576  tggaagatacccttgcagacaccga 600
             ||||||||||||||||||| ||||
Sbjct: 960  cggaagatacccttgcagacgccga 936

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 110  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                               
Query: 170  ggcattttggtcggtgcaaccttccggcacgggca 204
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggca 1458



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1347 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1288

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1287 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1228

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1227 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1168

                                             
Query: 407  ccgcgagttcaccagcctcttgccaatgttctc 439
            || ||||||||||||||||||||||||||||||
Sbjct: 1167 cctcgagttcaccagcctcttgccaatgttctc 1135



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                        
Query: 456  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1118 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1059

                                                                        
Query: 516  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1058 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 999

                                     
Query: 576  tggaagatacccttgcagacaccga 600
             ||||||||||||||||||| ||||
Sbjct: 998  cggaagatacccttgcagacgccga 974

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 110  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                               
Query: 170  ggcattttggtcggtgcaaccttccggcacgggca 204
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggca 1457



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1346 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1287

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1286 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1227

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1226 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1167

                                             
Query: 407  ccgcgagttcaccagcctcttgccaatgttctc 439
            || ||||||||||||||||||||||||||||||
Sbjct: 1166 cctcgagttcaccagcctcttgccaatgttctc 1134



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                        
Query: 456  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1117 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1058

                                                                        
Query: 516  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1057 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 998

                                     
Query: 576  tggaagatacccttgcagacaccga 600
             ||||||||||||||||||| ||||
Sbjct: 997  cggaagatacccttgcagacgccga 973

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 110  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                               
Query: 170  ggcattttggtcggtgcaaccttccggcacgggca 204
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggca 1241



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1130 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1071

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1070 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1011

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1010 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 951

                                             
Query: 407  ccgcgagttcaccagcctcttgccaatgttctc 439
            || ||||||||||||||||||||||||||||||
Sbjct: 950  cctcgagttcaccagcctcttgccaatgttctc 918



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                       
Query: 456 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
           ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 901 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 842

                                                                       
Query: 516 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
           ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 841 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 782

                                    
Query: 576 tggaagatacccttgcagacaccga 600
            ||||||||||||||||||| ||||
Sbjct: 781 cggaagatacccttgcagacgccga 757

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 110      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 170      ggcattttggtcggtgcaaccttccggcacgggca 204
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                            
Query: 227      accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
                |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 28285898 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 28285957

                                                                            
Query: 287      catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
                || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 28285958 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 28286017

                                                                            
Query: 347      cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
                 |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 28286018 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 28286077

                                                 
Query: 407      ccgcgagttcaccagcctcttgccaatgttctc 439
                || ||||||||||||||||||||||||||||||
Sbjct: 28286078 cctcgagttcaccagcctcttgccaatgttctc 28286110



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Plus

                                                                            
Query: 513      atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 572
                |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 28286276 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28286335

                                            
Query: 573      gtctggaagatacccttgcagacaccga 600
                ||  ||||||||||||||||||| ||||
Sbjct: 28286336 gtgcggaagatacccttgcagacgccga 28286363



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 128      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 187
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700

                               
Query: 188      accttccggcacggg 202
                 ||  ||||||||||
Sbjct: 28289701 tcccgccggcacggg 28289715



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 456      acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 505
                ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 28286127 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28286176



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 411      gagttcaccagcctcttgccaatgttctc 439
                ||||||||||||||| |||| ||||||||
Sbjct: 28289912 gagttcaccagcctcctgccgatgttctc 28289940

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 110  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                               
Query: 170  ggcattttggtcggtgcaaccttccggcacgggca 204
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggca 1462



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1351 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1292

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1291 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1232

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1231 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1172

                                             
Query: 407  ccgcgagttcaccagcctcttgccaatgttctc 439
            || ||||||||||||||||||||||||||||||
Sbjct: 1171 cctcgagttcaccagcctcttgccaatgttctc 1139



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                        
Query: 456  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1122 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1063

                                                                        
Query: 516  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1062 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 1003

                                     
Query: 576  tggaagatacccttgcagacaccga 600
             ||||||||||||||||||| ||||
Sbjct: 1002 cggaagatacccttgcagacgccga 978

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  129 bits (65), Expect = 1e-26
 Identities = 191/233 (81%)
 Strand = Plus / Minus

                                                                        
Query: 303  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 362
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                                                                        
Query: 363  ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 422
            |||||||  |||||||| ||||| ||||| |||   ||||| ||||  ||||| || |||
Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagc 1123

                                                                        
Query: 423  ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 482
            | ||||   ||||||||||  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 1122 cgcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 1063

                                                                 
Query: 483  acccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtc 535
            ||||| || ||||| || ||||| ||||| ||||| || || |||||||||||
Sbjct: 1062 acccgcgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtc 1010

---

>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                       
Query: 116 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 175
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 176 ttggtcggtgcaaccttccggcacgggca 204
             |||||||||||||||||||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                       
Query: 227 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
           |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 564 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 505

                                                                       
Query: 287 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
           || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 504 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 445

                                                                       
Query: 347 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 444 tccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 385

                                            
Query: 407 ccgcgagttcaccagcctcttgccaatgttctc 439
           || ||||||||||||||||||||||||||||||
Sbjct: 384 cctcgagttcaccagcctcttgccaatgttctc 352



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                       
Query: 456 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
           ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 335 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 276

                                                                       
Query: 516 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
           ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 275 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 216

                                    
Query: 576 tggaagatacccttgcagacaccga 600
            ||||||||||||||||||| ||||
Sbjct: 215 cggaagatacccttgcagacgccga 191

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 227  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 286
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1358 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1299

                                                                        
Query: 287  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 346
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1298 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1239

                                                                        
Query: 347  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 406
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1238 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1179

                                             
Query: 407  ccgcgagttcaccagcctcttgccaatgttctc 439
            || ||||||||||||||||||||||||||||||
Sbjct: 1178 cctcgagttcaccagcctcttgccaatgttctc 1146



 Score =  117 bits (59), Expect = 4e-23
 Identities = 87/95 (91%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 110  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                               
Query: 170  ggcattttggtcggtgcaaccttccggcacgggca 204
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggca 1469



 Score =  113 bits (57), Expect = 7e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                        
Query: 456  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1129 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1070

                                                                        
Query: 516  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 575
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1069 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 1010

                                     
Query: 576  tggaagatacccttgcagacaccga 600
             ||||||||||||||||||| ||||
Sbjct: 1009 cggaagatacccttgcagacgccga 985

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  119 bits (60), Expect = 1e-23
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 231  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 290
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1000 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 941

                                                                        
Query: 291  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 350
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 940  tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 881

                                                                        
Query: 351  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 410
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 880  tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 821

                                
Query: 411  gagttcaccagcctcttgcc 430
            ||||||||||||||||||||
Sbjct: 820  gagttcaccagcctcttgcc 801



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 458 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 517
           |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 773 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 714

                                             
Query: 518 ttgtcctgggaaggtgtcgacgatcttgacgaca 551
           ||| || |||||||||||||||| ||||| ||||
Sbjct: 713 ttggccggggaaggtgtcgacgagcttgatgaca 680



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 120  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 179
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 180  tcggtgcaaccttc 193
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  119 bits (60), Expect = 1e-23
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 231  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 290
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135

                                                                        
Query: 291  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 350
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075

                                                                        
Query: 351  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 410
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015

                                
Query: 411  gagttcaccagcctcttgcc 430
            ||||||||||||||||||||
Sbjct: 1014 gagttcaccagcctcttgcc 995



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 458 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 517
           |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 967 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 908

                                             
Query: 518 ttgtcctgggaaggtgtcgacgatcttgacgaca 551
           ||| || |||||||||||||||| ||||| ||||
Sbjct: 907 ttggccggggaaggtgtcgacgagcttgatgaca 874



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 120  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 179
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 180  tcggtgcaaccttc 193
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232

---

>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 110 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                              
Query: 170 ggcattttggtcggtgcaaccttccggcacgggca 204
           ||||    ||||||  |||||||||||||| ||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcacaggca 41

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 231  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 290
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1301 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1242

                                                                        
Query: 291  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 350
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1241 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1182

                                                                        
Query: 351  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 410
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1181 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1122

                             
Query: 411  gagttcaccagcctctt 427
            |||||||||||||||||
Sbjct: 1121 gagttcaccagcctctt 1105



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                        
Query: 458  ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 517
            |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 1074 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 1015

                                              
Query: 518  ttgtcctgggaaggtgtcgacgatcttgacgaca 551
            ||| || |||||||||||||||| ||||| ||||
Sbjct: 1014 ttggccggggaaggtgtcgacgagcttgatgaca 981



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 120  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 179
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 180  tcggtgcaaccttc 193
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 231  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 290
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105

                                                                        
Query: 291  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 350
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045

                                                                        
Query: 351  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 410
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985

                             
Query: 411  gagttcaccagcctctt 427
            |||||||||||||||||
Sbjct: 984  gagttcaccagcctctt 968



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 458 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 517
           |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 937 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 878

                                             
Query: 518 ttgtcctgggaaggtgtcgacgatcttgacgaca 551
           ||| || |||||||||||||||| ||||| ||||
Sbjct: 877 ttggccggggaaggtgtcgacgagcttgatgaca 844



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 120  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 179
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 180  tcggtgcaaccttc 193
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 232 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 291
           ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860

                                                                       
Query: 292 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 351
           |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800

                                                   
Query: 352 actctagcagcttctcgactgtcatctttggctgctcgaa 391
           |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                       
Query: 468 acctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctggg 527
           ||||| |||||||| ||||| |||||||| || ||||| ||||| ||||| || || |||
Sbjct: 683 acctcgtcgtcgtagacccgggcacgcagcgcgccgaagaagtcgatggactggccaggg 624

                      
Query: 528 aaggtgtcgac 538
           |||||||||||
Sbjct: 623 aaggtgtcgac 613

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 232  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 291
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 292  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 351
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 352  actctagcagcttctcgactgtcatctttggctgctcgaa 391
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 468  acctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctggg 527
            ||||| |||||||| ||||| |||||||| || ||||| || || ||||| || || |||
Sbjct: 1078 acctcgtcgtcgtagacccgggcacgcagcgcgccgaagaaatcgatggactggccaggg 1019

                       
Query: 528  aaggtgtcgac 538
            |||||||||||
Sbjct: 1018 aaggtgtcgac 1008

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 232  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 291
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 292  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 351
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 352  actctagcagcttctcgactgtcatctttggctgctcgaa 391
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                        
Query: 452  gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 511
            ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| |||||
Sbjct: 1243 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 1184

                                    
Query: 512  aatggattgtcctgggaaggtgtc 535
             ||||| || || |||||||||||
Sbjct: 1183 gatggactgccccgggaaggtgtc 1160



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 303  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 362
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333

                                         
Query: 363  ttctcgactgtcatctttggctgctcgaa 391
            ||||| |  |||||||| ||||| |||||
Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304

---

>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 249 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 308
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 309 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 364
           || | ||| |||||||||||||||||||| |||||||  || ||||||||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 110     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 170     ggcattttggtcggtgcaaccttccggcacgggca 204
               ||||    |||||||||||||||||||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319

---

>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 110   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 169
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 170   ggcattttggtcggtgcaaccttccggcacgggca 204
             ||||    |||||||||||||||||||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 494  cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtc 535
            ||||||||||||||||||||||||||| || |||||||||||
Sbjct: 1113 cagagcaccgaaaaagtcaatggattggcccgggaaggtgtc 1072

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 107/132 (81%)
 Strand = Plus / Minus

                                                                       
Query: 467 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 526
           ||||||||| ||||| || || || | ||||||||| || |||||||| |||||||| ||
Sbjct: 462 cacctcatcatcgtatactcgtgccctcagagcaccaaagaagtcaatagattgtccagg 403

                                                                       
Query: 527 gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 586
           |||||| ||||| ||||| || ||||  || |||   || |||||||||  ||| |||||
Sbjct: 402 gaaggtatcgacaatctttacaacagcttcctcaggcacgttgtcggtcctgaaaatacc 343

                       
Query: 587 cttgcagacacc 598
           |||||| |||||
Sbjct: 342 cttgcaaacacc 331

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 494  cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 547
            |||||||||||| || ||||| |||||||| |||||| | ||||||||||||||
Sbjct: 1126 cagagcaccgaagaaatcaatagattgtccagggaagctatcgacgatcttgac 1073

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 474  tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 533
            ||||||||||| || |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 2723 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 2664

              
Query: 534  tc 535
            ||
Sbjct: 2663 tc 2662

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 474  tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 533
            ||||||||||| || |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 1033 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 974

              
Query: 534  tc 535
            ||
Sbjct: 973  tc 972

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 260  gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 319
            |||||||||||| ||||| |||| ||||| |||  | ||||| |  || || | ||| ||
Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304

                                                                        
Query: 320  attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 379
            ||| || ||||| ||||| |||||||  |||||||| || ||||| ||||  ||||||||
Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244

                        
Query: 380  tggctgctcgaa 391
             |||||||||||
Sbjct: 1243 cggctgctcgaa 1232



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                        
Query: 458  ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 517
            |||||| | ||| ||||||||||| |||| ||| | ||  ||||| || || ||||| ||
Sbjct: 1165 ccacttcctcacttcatcgtcgtaaaccctagccctcaaggcaccaaagaaatcaataga 1106

                              
Query: 518  ttgtcctgggaaggtgtc 535
            ||| ||||||||||||||
Sbjct: 1105 ttggcctgggaaggtgtc 1088

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 1134 gaagatacccttgcagacaccgatac 1109

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 1134 gaagatacccttgcagacaccgatac 1109

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 1163 gaagatacccttgcagacaccgatac 1138

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 1045 gaagatacccttgcagacaccgatac 1020

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 498  gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 547
            |||||||| || ||||| ||||| || |||||||||||||||| ||||||
Sbjct: 1164 gcaccgaagaaatcaatagattggccagggaaggtgtcgacgagcttgac 1115

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 578 gaagatacccttgcagacaccgatac 603
           ||||||||||||||||||||||||||
Sbjct: 960 gaagatacccttgcagacaccgatac 935

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 578   gaagatacccttgcagacaccgatac 603
             ||||||||||||||||||||||||||
Sbjct: 14154 gaagatacccttgcagacaccgatac 14179

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 1048 gaagatacccttgcagacaccgatac 1023

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 1037 gaagatacccttgcagacaccgatac 1012

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 1045 gaagatacccttgcagacaccgatac 1020

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 1048 gaagatacccttgcagacaccgatac 1023

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 1163 gaagatacccttgcagacaccgatac 1138

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 457  cccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgg 516
            ||||||| | ||| |||||||| || || ||||| | || |||||| || ||||| || |
Sbjct: 1161 cccactttctcacttcatcgtcataaactcgagctctcaaagcaccaaagaagtctattg 1102

                                  
Query: 517  attgtcctgggaaggtgtcgac 538
            | ||||||||||||||||||||
Sbjct: 1101 actgtcctgggaaggtgtcgac 1080

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 578  gaagatacccttgcagacaccgatac 603
            ||||||||||||||||||||||||||
Sbjct: 3129 gaagatacccttgcagacaccgatac 3104

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 474 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 533
           |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| |
Sbjct: 618 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 559

                            
Query: 534 tcgacgatcttgacgac 550
           ||||||| || ||||||
Sbjct: 558 tcgacgagctggacgac 542

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 474 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 533
           |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| |
Sbjct: 626 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 567

                            
Query: 534 tcgacgatcttgacgac 550
           ||||||| || ||||||
Sbjct: 566 tcgacgagctggacgac 550

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 477 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 536
           ||||| |||||||| | ||  |||||||| || || |||||||| || ||||||||||||
Sbjct: 944 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 885

               
Query: 537 acga 540
           ||||
Sbjct: 884 acga 881

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 456 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 515
           |||||||| | ||| ||||| |||||||| | ||| | ||  |||||||| || || |||
Sbjct: 589 acccacttcctcacttcatcatcgtacactctagccctcaatgcaccgaagaaatcgatg 530

                                           
Query: 516 gattgtcctgggaaggtgtcgacgatcttgac 547
           ||||| || ||||||||||| || ||||||||
Sbjct: 529 gattggccagggaaggtgtcaacaatcttgac 498

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 477 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 536
           ||||| |||||||| | ||  |||||||| || || |||||||| || ||||||||||||
Sbjct: 945 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 886

               
Query: 537 acga 540
           ||||
Sbjct: 885 acga 882

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 252  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 301
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 564  acattgtcggtctggaagatacccttgcagacaccgatac 603
            |||||||| |||  ||| ||||||||||||||||| ||||
Sbjct: 1043 acattgtcagtcctgaaaatacccttgcagacaccaatac 1004

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 498 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 547
           |||||||||||||| || |||||||| |||||| | || || ||||||||
Sbjct: 345 gcaccgaaaaagtcgatagattgtccagggaagttatcaacaatcttgac 296

---

>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 265   catcacccagagctgcctggct 286
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254

---

>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 15    aatatatttagagatatattaa 36
             ||||||||||||||||||||||
Sbjct: 67942 aatatatttagagatatattaa 67963

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                        
Query: 471  tcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaag 530
            ||||||||||| || ||||| | ||  || ||||||||||| || |||||||| ||||||
Sbjct: 1305 tcatcgtcgtatacacgagccctcaacgctccgaaaaagtcgatagattgtccagggaag 1246

                      
Query: 531  gtgtcgacga 540
            | ||| ||||
Sbjct: 1245 gcgtcaacga 1236

---

>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence
          Length = 177245

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    tatatttagagatatattaac 37
             |||||||||||||||||||||
Sbjct: 12315 tatatttagagatatattaac 12335

---

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 525  gggaaggtgtcgacgatcttg 545
            |||||||||||||||||||||
Sbjct: 3653 gggaaggtgtcgacgatcttg 3673

---

>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence
          Length = 98660

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    tatatttagagatatattaac 37
             |||||||||||||||||||||
Sbjct: 66387 tatatttagagatatattaac 66367

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 86      aaacatcagatattaaaagtg 106
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 303  agctgcacacgcttgacattgtcctgctc 331
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 86      aaacatcagatattaaaagtg 106
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365

---

>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 86     aaacatcagatattaaaagtg 106
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423

---

>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence
          Length = 105452

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 17   tatatttagagatatattaac 37
            |||||||||||||||||||||
Sbjct: 6217 tatatttagagatatattaac 6197

---

>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 575   ctggaagatacccttgcagacacc 598
             ||||| ||||||||||||||||||
Sbjct: 67288 ctggatgatacccttgcagacacc 67265

---

>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  catcacccagagctgcctggctca 288
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 261  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 320
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 321  ttgtcctgctcctggacgagcatg 344
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263

---

>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 gtcagcaagctgcacacgct 315
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223

---

>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 543 ttgacgacagactcgtcact 562
           ||||||||||||||||||||
Sbjct: 289 ttgacgacagactcgtcact 308

---

>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     tcagatattaaaagtggcat 110
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077

---

>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     tcagatattaaaagtggcat 110
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583

---

>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    tcagatattaaaagtggcat 110
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911

---

>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  catcacccagagctgcctggctca 288
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619

---

>gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166149

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    aatatatttagagatatatt 34
             ||||||||||||||||||||
Sbjct: 30454 aatatatttagagatatatt 30473

---

>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    ttgacattgtcctgctcctg 334
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419

---

>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  catcacccagagctgcctggctca 288
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935

---

>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 119  ggtgtaaaggcagctgccgtcgtcgctc 146
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133

---

>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    aaacatgcccagcaatcgcttgga 62
             |||||||||||||||||| |||||
Sbjct: 41692 aaacatgcccagcaatcgattgga 41715

---

>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  catcacccagagctgcctggctca 288
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659

---

>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  catcacccagagctgcctggctca 288
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026

---

>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  catcacccagagctgcctggctca 288
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935

---

>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   tggcatgcttaaaaggtgta 124
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254

---

>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    ttgacattgtcctgctcctg 334
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979

---

>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  catcacccagagctgcctggctca 288
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619

---

>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
             complete sequence
          Length = 174701

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aatatatttagagatatatt 34
             ||||||||||||||||||||
Sbjct: 62504 aatatatttagagatatatt 62485

---

>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 90     atcagatattaaaagtggcatgct 113
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,883,678
Number of Sequences: 3902068
Number of extensions: 3883678
Number of successful extensions: 71554
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 71173
Number of HSP's gapped (non-prelim): 324
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---