ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal27b18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_467368.1| Oryza sativa (japonica cultivar-group), mRNA 365 1e-97
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 365 1e-97
3dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic D... 365 1e-97
4dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic D... 365 1e-97
5dbj|AK063491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 1e-97
6gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 74 5e-10
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
8dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
9gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
10gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
11gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.8
12gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 1.8
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
14ref|XM_482467.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
15gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 7.0
16ref|NM_001016231.2| Xenopus tropicalis hypothetical protein LOC5... 40 7.0
17gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's ... 40 7.0
18ref|XM_582488.2| PREDICTED: Bos taurus similar to glutathione S-... 40 7.0
19ref|XM_540093.2| PREDICTED: Canis familiaris similar to CG10670-... 40 7.0
20emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.0
21gb|AC165062.2| Phakopsora pachyrhizi clone JGIAFNA-2121D12, comp... 40 7.0
22emb|AJ719389.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.0
23gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.0
24gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.0
25gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.0
26dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.0
27gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.0
28gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.0
29tpg|BK000460.1| TPA: TPA_exp: Chlamydomonas reinhardtii p72 mRNA... 40 7.0
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
31gb|AF512500.1| Chlamydomonas reinhardtii RIB72 protein mRNA, com... 40 7.0
32dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
33ref|NM_211012.1| Eremothecium gossypii AFR111Cp (AFR111C), mRNA 40 7.0
34emb|CR926283.2| Xenopus tropicalis finished cDNA, clone TEgg040e19 40 7.0
35dbj|AP001982.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.0
36dbj|AP001924.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.0
37emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 7.0

>ref|XM_467368.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1539

 Score =  365 bits (184), Expect = 1e-97
 Identities = 259/284 (91%)
 Strand = Plus / Minus

                                                                        
Query: 221  gcgagccactggagcagcgccgcgttgaactgctccggcgcctcgtcgtgcgggcagtgc 280
            |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| || 
Sbjct: 1253 gcgagccactcgagcagcgccccgttgaactgctccggcgcctcgtcgtgggggcaatgg 1194

                                                                        
Query: 281  ccggcctgcaggttgacgacggtggagttggcgtagaactcgtggatccgcgccgccttg 340
            |||||||| |||||||||||||||| ||    ||||||||  | |||| |||||||||| 
Sbjct: 1193 ccggcctggaggttgacgacggtggtgtcctggtagaacttcttgatctgcgccgccttc 1134

                                                                        
Query: 341  gccgggccgacccacgggtccaggtccccccacaacagcagcagcgggcacgtcagcttc 400
            ||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||| 
Sbjct: 1133 gccggcccgacccacgggtcgaggtccccccacagcagcagcagcgggcacgacagcttg 1074

                                                                        
Query: 401  cccagcagcttgtcaagcgtgtaccggctctggttcgccatgaaccgcgacatgagcctg 460
            ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1073 cccagcagcctgtccagcgtgtaccggctctggttcgccatgaaccgcgacatcagcctg 1014

                                                        
Query: 461  tagtacacctcgccggcgttcgggtcggccgtcggcgccgtgat 504
            |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1013 tagtacacctcgccggcgttcgggtccgccgtcggcgccgtgat 970



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  365 bits (184), Expect = 1e-97
 Identities = 259/284 (91%)
 Strand = Plus / Plus

                                                                            
Query: 221      gcgagccactggagcagcgccgcgttgaactgctccggcgcctcgtcgtgcgggcagtgc 280
                |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| || 
Sbjct: 29117884 gcgagccactcgagcagcgccccgttgaactgctccggcgcctcgtcgtgggggcaatgg 29117943

                                                                            
Query: 281      ccggcctgcaggttgacgacggtggagttggcgtagaactcgtggatccgcgccgccttg 340
                |||||||| |||||||||||||||| ||    ||||||||  | |||| |||||||||| 
Sbjct: 29117944 ccggcctggaggttgacgacggtggtgtcctggtagaacttcttgatctgcgccgccttc 29118003

                                                                            
Query: 341      gccgggccgacccacgggtccaggtccccccacaacagcagcagcgggcacgtcagcttc 400
                ||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||| 
Sbjct: 29118004 gccggcccgacccacgggtcgaggtccccccacagcagcagcagcgggcacgacagcttg 29118063

                                                                            
Query: 401      cccagcagcttgtcaagcgtgtaccggctctggttcgccatgaaccgcgacatgagcctg 460
                ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 29118064 cccagcagcctgtccagcgtgtaccggctctggttcgccatgaaccgcgacatcagcctg 29118123

                                                            
Query: 461      tagtacacctcgccggcgttcgggtcggccgtcggcgccgtgat 504
                |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 29118124 tagtacacctcgccggcgttcgggtccgccgtcggcgccgtgat 29118167



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>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0724B10
          Length = 169143

 Score =  365 bits (184), Expect = 1e-97
 Identities = 259/284 (91%)
 Strand = Plus / Plus

                                                                          
Query: 221    gcgagccactggagcagcgccgcgttgaactgctccggcgcctcgtcgtgcgggcagtgc 280
              |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| || 
Sbjct: 164049 gcgagccactcgagcagcgccccgttgaactgctccggcgcctcgtcgtgggggcaatgg 164108

                                                                          
Query: 281    ccggcctgcaggttgacgacggtggagttggcgtagaactcgtggatccgcgccgccttg 340
              |||||||| |||||||||||||||| ||    ||||||||  | |||| |||||||||| 
Sbjct: 164109 ccggcctggaggttgacgacggtggtgtcctggtagaacttcttgatctgcgccgccttc 164168

                                                                          
Query: 341    gccgggccgacccacgggtccaggtccccccacaacagcagcagcgggcacgtcagcttc 400
              ||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||| 
Sbjct: 164169 gccggcccgacccacgggtcgaggtccccccacagcagcagcagcgggcacgacagcttg 164228

                                                                          
Query: 401    cccagcagcttgtcaagcgtgtaccggctctggttcgccatgaaccgcgacatgagcctg 460
              ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 164229 cccagcagcctgtccagcgtgtaccggctctggttcgccatgaaccgcgacatcagcctg 164288

                                                          
Query: 461    tagtacacctcgccggcgttcgggtcggccgtcggcgccgtgat 504
              |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 164289 tagtacacctcgccggcgttcgggtccgccgtcggcgccgtgat 164332



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>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0680A05
          Length = 168092

 Score =  365 bits (184), Expect = 1e-97
 Identities = 259/284 (91%)
 Strand = Plus / Plus

                                                                        
Query: 221  gcgagccactggagcagcgccgcgttgaactgctccggcgcctcgtcgtgcgggcagtgc 280
            |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| || 
Sbjct: 7852 gcgagccactcgagcagcgccccgttgaactgctccggcgcctcgtcgtgggggcaatgg 7911

                                                                        
Query: 281  ccggcctgcaggttgacgacggtggagttggcgtagaactcgtggatccgcgccgccttg 340
            |||||||| |||||||||||||||| ||    ||||||||  | |||| |||||||||| 
Sbjct: 7912 ccggcctggaggttgacgacggtggtgtcctggtagaacttcttgatctgcgccgccttc 7971

                                                                        
Query: 341  gccgggccgacccacgggtccaggtccccccacaacagcagcagcgggcacgtcagcttc 400
            ||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||| 
Sbjct: 7972 gccggcccgacccacgggtcgaggtccccccacagcagcagcagcgggcacgacagcttg 8031

                                                                        
Query: 401  cccagcagcttgtcaagcgtgtaccggctctggttcgccatgaaccgcgacatgagcctg 460
            ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 8032 cccagcagcctgtccagcgtgtaccggctctggttcgccatgaaccgcgacatcagcctg 8091

                                                        
Query: 461  tagtacacctcgccggcgttcgggtcggccgtcggcgccgtgat 504
            |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8092 tagtacacctcgccggcgttcgggtccgccgtcggcgccgtgat 8135



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>dbj|AK063491.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-C10, full
            insert sequence
          Length = 1540

 Score =  365 bits (184), Expect = 1e-97
 Identities = 259/284 (91%)
 Strand = Plus / Minus

                                                                        
Query: 221  gcgagccactggagcagcgccgcgttgaactgctccggcgcctcgtcgtgcgggcagtgc 280
            |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| || 
Sbjct: 1253 gcgagccactcgagcagcgccccgttgaactgctccggcgcctcgtcgtgggggcaatgg 1194

                                                                        
Query: 281  ccggcctgcaggttgacgacggtggagttggcgtagaactcgtggatccgcgccgccttg 340
            |||||||| |||||||||||||||| ||    ||||||||  | |||| |||||||||| 
Sbjct: 1193 ccggcctggaggttgacgacggtggtgtcctggtagaacttcttgatctgcgccgccttc 1134

                                                                        
Query: 341  gccgggccgacccacgggtccaggtccccccacaacagcagcagcgggcacgtcagcttc 400
            ||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||| 
Sbjct: 1133 gccggcccgacccacgggtcgaggtccccccacagcagcagcagcgggcacgacagcttg 1074

                                                                        
Query: 401  cccagcagcttgtcaagcgtgtaccggctctggttcgccatgaaccgcgacatgagcctg 460
            ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1073 cccagcagcctgtccagcgtgtaccggctctggttcgccatgaaccgcgacatcagcctg 1014

                                                        
Query: 461  tagtacacctcgccggcgttcgggtcggccgtcggcgccgtgat 504
            |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1013 tagtacacctcgccggcgttcgggtccgccgtcggcgccgtgat 970



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                           
Query: 222    cgagccactggagcagcgccgcgttgaactgctccggcgcctcgt 266
              ||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 614959 cgagccactggagcagcgccgcgttcacctgctccggcgcctcgt 615003



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 195      tgtcgccggcctcctcctccag 216
                ||||||||||||||||||||||
Sbjct: 29552552 tgtcgccggcctcctcctccag 29552573



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>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0627E10
          Length = 163388

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 195   tgtcgccggcctcctcctccag 216
             ||||||||||||||||||||||
Sbjct: 79224 tgtcgccggcctcctcctccag 79245



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>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0017K09, complete sequence
          Length = 155525

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  ttgtcgccggcctcctcctcc 214
            |||||||||||||||||||||
Sbjct: 6927 ttgtcgccggcctcctcctcc 6907



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>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02,
             complete sequence
          Length = 99795

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 194   ttgtcgccggcctcctcctcc 214
             |||||||||||||||||||||
Sbjct: 95418 ttgtcgccggcctcctcctcc 95398



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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 185     tcggccggcttgtcgccggcctcctcctc 213
               |||||| ||| ||||||||||||||||||
Sbjct: 1884104 tcggcccgctcgtcgccggcctcctcctc 1884132



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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 329     cgcgccgccttggccgggccgaccc 353
               ||||||||| |||||||||||||||
Sbjct: 3830347 cgcgccgccatggccgggccgaccc 3830323



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 194      ttgtcgccggcctcctcctcc 214
                |||||||||||||||||||||
Sbjct: 24492745 ttgtcgccggcctcctcctcc 24492725



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>ref|XM_482467.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 834

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 291 ggttgacgacggtggagttggcgt 314
           ||||||||||||||| ||||||||
Sbjct: 280 ggttgacgacggtggcgttggcgt 257



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     tcggccggcttgtcgccggc 204
               ||||||||||||||||||||
Sbjct: 3653567 tcggccggcttgtcgccggc 3653586



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>ref|NM_001016231.2| Xenopus tropicalis hypothetical protein LOC548985 (LOC548985), mRNA
          Length = 3594

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 acgtcagcttccccagcagc 409
           ||||||||||||||||||||
Sbjct: 398 acgtcagcttccccagcagc 379



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>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 262323

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    cccacaacagcagcagcggg 388
              ||||||||||||||||||||
Sbjct: 173174 cccacaacagcagcagcggg 173193



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>ref|XM_582488.2| PREDICTED: Bos taurus similar to glutathione S-transferase, theta 3
           (LOC506093), mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 cgtcagcttccccagcagct 410
           ||||||||||||||||||||
Sbjct: 291 cgtcagcttccccagcagct 272



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>ref|XM_540093.2| PREDICTED: Canis familiaris similar to CG10670-PA (LOC482980), mRNA
          Length = 2854

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 393 tcagcttccccagcagcttg 412
           ||||||||||||||||||||
Sbjct: 407 tcagcttccccagcagcttg 388



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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    cgggtcggccgtcggcgccg 500
              ||||||||||||||||||||
Sbjct: 722474 cgggtcggccgtcggcgccg 722455



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>gb|AC165062.2| Phakopsora pachyrhizi clone JGIAFNA-2121D12, complete sequence
          Length = 38005

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 490   cgtcggcgccgtgatcgagc 509
             ||||||||||||||||||||
Sbjct: 13835 cgtcggcgccgtgatcgagc 13816



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>emb|AJ719389.1| Gallus gallus mRNA for hypothetical protein, clone 1n16
          Length = 2992

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 gtcgccggcctcctcctcca 215
           ||||||||||||||||||||
Sbjct: 758 gtcgccggcctcctcctcca 739



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    cgccgccttggccgggccga 350
              ||||||||||||||||||||
Sbjct: 867150 cgccgccttggccgggccga 867131



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 225     gccactggagcagcgccgcg 244
               ||||||||||||||||||||
Sbjct: 1963802 gccactggagcagcgccgcg 1963821



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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 473     ccggcgttcgggtcggccgtcggc 496
               ||||| ||||||||||||||||||
Sbjct: 3345413 ccggcattcgggtcggccgtcggc 3345436



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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 326     atccgcgccgccttggccgggccg 349
               ||||||||||||| ||||||||||
Sbjct: 2193165 atccgcgccgcctgggccgggccg 2193142



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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 326     atccgcgccgccttggccgg 345
               ||||||||||||||||||||
Sbjct: 2893522 atccgcgccgccttggccgg 2893503



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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    cgcgttgaactgctccggcg 260
              ||||||||||||||||||||
Sbjct: 638030 cgcgttgaactgctccggcg 638049



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>tpg|BK000460.1| TPA: TPA_exp: Chlamydomonas reinhardtii p72 mRNA, complete cds
          Length = 2617

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  gacgacctggaggctgggct 185
            ||||||||||||||||||||
Sbjct: 1858 gacgacctggaggctgggct 1877



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 291      ggttgacgacggtggagttggcgt 314
                ||||||||||||||| ||||||||
Sbjct: 20344143 ggttgacgacggtggcgttggcgt 20344120



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>gb|AF512500.1| Chlamydomonas reinhardtii RIB72 protein mRNA, complete cds
          Length = 2683

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  gacgacctggaggctgggct 185
            ||||||||||||||||||||
Sbjct: 1896 gacgacctggaggctgggct 1915



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>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056L09
          Length = 152910

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   ggttgacgacggtggagttggcgt 314
             ||||||||||||||| ||||||||
Sbjct: 91891 ggttgacgacggtggcgttggcgt 91868



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>ref|NM_211012.1| Eremothecium gossypii AFR111Cp (AFR111C), mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 cgcgttgaactgctccggcg 260
           ||||||||||||||||||||
Sbjct: 453 cgcgttgaactgctccggcg 434



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>emb|CR926283.2| Xenopus tropicalis finished cDNA, clone TEgg040e19
          Length = 3594

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 acgtcagcttccccagcagc 409
           ||||||||||||||||||||
Sbjct: 398 acgtcagcttccccagcagc 379



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>dbj|AP001982.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-344F5, complete
              sequence
          Length = 137996

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    tggtggtgcaagcacaagaa 162
              ||||||||||||||||||||
Sbjct: 109432 tggtggtgcaagcacaagaa 109451



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>dbj|AP001924.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-166D19, complete
            sequence
          Length = 190360

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  tggtggtgcaagcacaagaa 162
            ||||||||||||||||||||
Sbjct: 6245 tggtggtgcaagcacaagaa 6264



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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 197     tcgccggcctcctcctccag 216
               ||||||||||||||||||||
Sbjct: 1182384 tcgccggcctcctcctccag 1182403


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,874,731
Number of Sequences: 3902068
Number of extensions: 3874731
Number of successful extensions: 84625
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83303
Number of HSP's gapped (non-prelim): 1317
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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