| Clone Name | rbaal26l21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor | 28 | 7.5 | 2 | ARD1H_MOUSE (Q9QY36) N-terminal acetyltransferase complex ARD1 s... | 27 | 9.8 | 3 | ARD1H_HUMAN (P41227) N-terminal acetyltransferase complex ARD1 s... | 27 | 9.8 |
|---|
>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor| Length = 1775 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Frame = -1 Query: 320 GLSVHG-AGRRGDHGDQNRAGM 258 GL+VHG AG G+ GDQ R+G+ Sbjct: 1094 GLAVHGRAGPPGEKGDQGRSGI 1115
>ARD1H_MOUSE (Q9QY36) N-terminal acetyltransferase complex ARD1 subunit homolog| A (EC 2.3.1.88) (EC 2.3.1.-) Length = 235 Score = 27.3 bits (59), Expect = 9.8 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 186 CSPNTYNLTYYYQHGINGIQL 248 C P Y + YY+ HG++ QL Sbjct: 21 CLPENYQMKYYFYHGLSWPQL 41
>ARD1H_HUMAN (P41227) N-terminal acetyltransferase complex ARD1 subunit homolog| A (EC 2.3.1.88) (EC 2.3.1.-) Length = 235 Score = 27.3 bits (59), Expect = 9.8 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 186 CSPNTYNLTYYYQHGINGIQL 248 C P Y + YY+ HG++ QL Sbjct: 21 CLPENYQMKYYFYHGLSWPQL 41 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,415,855 Number of Sequences: 219361 Number of extensions: 519319 Number of successful extensions: 1443 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1423 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1442 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)