ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal27a16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009270.1| Triticum aestivum clone wlk8.pk0008.g5:fis, full insert mRNA sequence Length = 788 Score = 955 bits (482), Expect = 0.0 Identities = 563/590 (95%) Strand = Plus / Minus Query: 95 cgtctacttctttctcctataaatcttcttcaaaaagatctttaaaatctcccgaatcgc 154 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 612 cgtctacttctttctcctataaatcttcttcaaaaagatcttcaaaatctcccgaatcgc 553 Query: 155 acgatccggttcagcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactc 214 ||| || || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 acggtctggctcggcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactc 493 Query: 215 caagaatatgtcctgaagatcaagctccttataaacattcttcactgctccgacacattc 274 |||||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||| Sbjct: 492 caagaatatgtcctgaagatcaagctccttgtaaacatttttcactgctgcaacacattc 433 Query: 275 tggggaagacttgccatagttctcgtatagtattttcatctcgttctcgttagccagttc 334 ||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 432 cgggcaagacttgccatagttttcgtatagtattttcatctcattctcattagccagttc 373 Query: 335 catagcctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgcc 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 catagcctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgcc 313 Query: 395 aataacttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcc 454 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 aataacttgagggtcgccgaagcaatccaggtagtcatcctgtatctgaaagtagactcc 253 Query: 455 catctcaatcagtacatttttcagctcgacgtagtcgctcagcttcgcgccattcaagag 514 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 252 catctcaatcagtacatttttgagctcgacgtagtcgctcagtttcgcgccattcaagag 193 Query: 515 cagcgcgcaggcaaccggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcg 574 || || || |||||||||||||||||||| |||||||| || |||||||||||||| || Sbjct: 192 caatgcacaagcaaccggcaggtagaaggaatagtaggatgttttgtacttgacaatacg 133 Query: 575 gcggtacccttggatcctgtatctggcgagatccttggcgccggtgtgggtggtgatgag 634 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132 gcggtacccttggatcctgtatctggcgaggtccttggcgccggtgtgggtggtgatgag 73 Query: 635 gtccagcatctgccccatggcggtctgcaacccaatctcgttccatagct 684 ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 72 gtccagcatctgccccatggcggtctgcaacccaatctcgttccagagct 23
>ref|XM_474182.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 595 bits (300), Expect = e-167 Identities = 529/606 (87%) Strand = Plus / Minus Query: 98 ctacttctttctcctataaatcttcttcaaaaagatctttaaaatctcccgaatcgcacg 157 ||||||||| ||||| ||||||||||||| ||| ||| ||||| |||||||| ||||| Sbjct: 1224 ctacttcttcctcctgtaaatcttcttcagaaacgacttcaaaatatcccgaattgcacg 1165 Query: 158 atccggttcagcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactccaa 217 || | || ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1164 gtcagtctcggcgtcgatggtcgaaaccaggtgcttgtaaactcttgactcgtactccaa 1105 Query: 218 gaatatgtcctgaagatcaagctccttataaacattcttcactgctccgacacattctgg 277 |||||||||||||||||||||||| | ||||| |||||||| || | || |||| ||| Sbjct: 1104 aaatatgtcctgaagatcaagctccctgtaaacgctcttcacttctgctacgcattttgg 1045 Query: 278 ggaagacttgccatagttctcgtatagtattttcatctcgttctcgttagccagttccat 337 | |||||| || |||||||| ||||||||||||||||| ||||| || || |||||||| Sbjct: 1044 gtcagacttcccgtagttctcatatagtattttcatctcattctcattggcgagttccat 985 Query: 338 agcctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaat 397 |||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 984 agcctgtactattagccaggaacacttgtagtcttcaatgtctgttccaaccttgccaat 925 Query: 398 aacttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccat 457 |||| |||||||| |||||||||| |||||||||||||||||||||||| || ||||| Sbjct: 924 cacttctgggtcaccaaagcaatccaagtagtcatcctgtatctgaaagtatacgcccat 865 Query: 458 ctcaatcagtacatttttcagctcgacgtagtcgctcagcttcgcgccattcaagagcag 517 || || ||||||||||||||||| || ||||| |||| |||||||||||||||| | Sbjct: 864 ttcgataagtacatttttcagctcaacatagtcactcaatctcgcgccattcaagagtaa 805 Query: 518 cgcgcaggcaaccggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcg 577 || || ||||||||||||||||| || ||||| || |||||||||||||||||||| || Sbjct: 804 tgcacatgcaaccggcaggtagaacgaatagtatgatgtcttgtacttgacaatgcgacg 745 Query: 578 gtacccttggatcctgtatctggcgagatccttggcgccggtgtgggtggtgatgaggtc 637 |||||| || || ||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 744 gtacccctgaattctgtatctggcgagatccttggcgccggtatgagtggtgatgagatc 685 Query: 638 cagcatctgccccatggcggtctgcaacccaatctcgttccatagctncatgagctncat 697 |||||||||||||||||| |||||||| || |||||||||||||||| |||||| | || Sbjct: 684 cagcatctgccccatggcagtctgcaagcctatctcgttccatagctccatgaggtccag 625 Query: 698 gaagta 703 |||||| Sbjct: 624 gaagta 619
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 97 tctacttctttctcctataaatcttcttcaaaaagatctttaaaatctcccgaatcgcac 156 |||||||||| ||||| ||||||||||||| ||| ||| ||||| |||||||| |||| Sbjct: 33558894 tctacttcttcctcctgtaaatcttcttcagaaacgacttcaaaatatcccgaattgcac 33558953 Query: 157 gatccggttcagcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactcca 216 | || | || ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 33558954 ggtcagtctcggcgtcgatggtcgaaaccaggtgcttgtaaactcttgactcgtactcca 33559013 Query: 217 agaatatgtcct 228 | |||||||||| Sbjct: 33559014 aaaatatgtcct 33559025 Score = 117 bits (59), Expect = 5e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 300 tatagtattttcatctcgttctcgttagccagttccatagcctggacaattagccaggag 359 ||||||||||||||||| ||||| || || |||||||||||||| || ||||||||||| Sbjct: 33559406 tatagtattttcatctcattctcattggcgagttccatagcctgtactattagccaggaa 33559465 Query: 360 cacttgtagtcttctatgtctgttccaacct 390 |||||||||||||| |||||||||||||||| Sbjct: 33559466 cacttgtagtcttcaatgtctgttccaacct 33559496 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 591 ctgtatctggcgagatccttggcgccggtgtgggtggtgatgaggtccagcatctgcccc 650 ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 33560053 ctgtatctggcgagatccttggcgccggtatgagtggtgatgagatccagcatctgcccc 33560112 Query: 651 atggcggtctgcaa 664 ||||| |||||||| Sbjct: 33560113 atggcagtctgcaa 33560126 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 433 cctgtatctgaaagtagactcccatctcaatcagtacatttttcagctcgacgtagtcgc 492 |||||||||||||||| || ||||| || || ||||||||||||||||| || ||||| | Sbjct: 33559692 cctgtatctgaaagtatacgcccatttcgataagtacatttttcagctcaacatagtcac 33559751 Query: 493 tcagcttcgcgccattcaagag 514 ||| |||||||||||||||| Sbjct: 33559752 tcaatctcgcgccattcaagag 33559773 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 528 accggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggtacc 582 |||||||||||||| || ||||| || |||||||||||||||||||| ||||||| Sbjct: 33559903 accggcaggtagaacgaatagtatgatgtcttgtacttgacaatgcgacggtacc 33559957 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 387 accttgccaataacttgagggtcaccgaagcaatccaggtagtcatcctg 436 ||||||||||| |||| |||||||| |||||||||| |||||||||||| Sbjct: 33559572 accttgccaatcacttctgggtcaccaaagcaatccaagtagtcatcctg 33559621 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Plus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggta 580 ||||| ||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 33552249 aggtaaaaggagtagtacgctgtcttgtacttaacaatgcgacggta 33552295 Score = 42.1 bits (21), Expect = 2.4 Identities = 60/73 (82%) Strand = Plus / Plus Query: 226 cctgaagatcaagctccttataaacattcttcactgctccgacacattctggggaagact 285 ||||||||||||||||| | ||||| |||||||| || | || |||| |||| ||||| Sbjct: 33559214 cctgaagatcaagctccctgtaaacgctcttcacttctgctacgcattttgggtcagact 33559273 Query: 286 tgccatagttctc 298 | || |||||||| Sbjct: 33559274 tcccgtagttctc 33559286
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 97 tctacttctttctcctataaatcttcttcaaaaagatctttaaaatctcccgaatcgcac 156 |||||||||| ||||| ||||||||||||| ||| ||| ||||| |||||||| |||| Sbjct: 135183 tctacttcttcctcctgtaaatcttcttcagaaacgacttcaaaatatcccgaattgcac 135242 Query: 157 gatccggttcagcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactcca 216 | || | || ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135243 ggtcagtctcggcgtcgatggtcgaaaccaggtgcttgtaaactcttgactcgtactcca 135302 Query: 217 agaatatgtcct 228 | |||||||||| Sbjct: 135303 aaaatatgtcct 135314 Score = 117 bits (59), Expect = 5e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 300 tatagtattttcatctcgttctcgttagccagttccatagcctggacaattagccaggag 359 ||||||||||||||||| ||||| || || |||||||||||||| || ||||||||||| Sbjct: 135695 tatagtattttcatctcattctcattggcgagttccatagcctgtactattagccaggaa 135754 Query: 360 cacttgtagtcttctatgtctgttccaacct 390 |||||||||||||| |||||||||||||||| Sbjct: 135755 cacttgtagtcttcaatgtctgttccaacct 135785 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 591 ctgtatctggcgagatccttggcgccggtgtgggtggtgatgaggtccagcatctgcccc 650 ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 136342 ctgtatctggcgagatccttggcgccggtatgagtggtgatgagatccagcatctgcccc 136401 Query: 651 atggcggtctgcaa 664 ||||| |||||||| Sbjct: 136402 atggcagtctgcaa 136415 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 433 cctgtatctgaaagtagactcccatctcaatcagtacatttttcagctcgacgtagtcgc 492 |||||||||||||||| || ||||| || || ||||||||||||||||| || ||||| | Sbjct: 135981 cctgtatctgaaagtatacgcccatttcgataagtacatttttcagctcaacatagtcac 136040 Query: 493 tcagcttcgcgccattcaagag 514 ||| |||||||||||||||| Sbjct: 136041 tcaatctcgcgccattcaagag 136062 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 528 accggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggtacc 582 |||||||||||||| || ||||| || |||||||||||||||||||| ||||||| Sbjct: 136192 accggcaggtagaacgaatagtatgatgtcttgtacttgacaatgcgacggtacc 136246 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 387 accttgccaataacttgagggtcaccgaagcaatccaggtagtcatcctg 436 ||||||||||| |||| |||||||| |||||||||| |||||||||||| Sbjct: 135861 accttgccaatcacttctgggtcaccaaagcaatccaagtagtcatcctg 135910 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Plus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggta 580 ||||| ||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 128538 aggtaaaaggagtagtacgctgtcttgtacttaacaatgcgacggta 128584 Score = 42.1 bits (21), Expect = 2.4 Identities = 60/73 (82%) Strand = Plus / Plus Query: 226 cctgaagatcaagctccttataaacattcttcactgctccgacacattctggggaagact 285 ||||||||||||||||| | ||||| |||||||| || | || |||| |||| ||||| Sbjct: 135503 cctgaagatcaagctccctgtaaacgctcttcacttctgctacgcattttgggtcagact 135562 Query: 286 tgccatagttctc 298 | || |||||||| Sbjct: 135563 tcccgtagttctc 135575
>ref|XM_695422.1| PREDICTED: Danio rerio similar to Im:6904202 protein (LOC571794), mRNA Length = 1659 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 404 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 460 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 868 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 812
>ref|XM_682059.1| PREDICTED: Danio rerio similar to Im:6904202 protein (LOC558794), mRNA Length = 1659 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 404 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 460 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 868 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 812
>gb|BC083515.1| Danio rerio farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), mRNA (cDNA clone IMAGE:7049076), partial cds Length = 2029 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 404 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 460 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 774 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 718
>gb|BC097112.1| Danio rerio farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), mRNA (cDNA clone MGC:114048 IMAGE:7417512), complete cds Length = 1836 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 404 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 460 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 843 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 787
>ref|NM_001025471.1| Danio rerio farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (fdps), mRNA Length = 1836 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 404 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 460 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 843 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 787
>gb|L39789.1|MZEFPS Zea mays farnesyl pyrophosphate synthetase (fps) mRNA, complete cds Length = 1378 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 902 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 843 Query: 405 gggtcaccgaagcaatccaggtagtcatcctg 436 || |||||| | |||||||| ||||||||||| Sbjct: 842 ggatcaccgtaacaatccagatagtcatcctg 811
>gb|BT016427.1| Zea mays clone Contig260 mRNA sequence Length = 1469 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 946 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 887 Query: 405 gggtcaccgaagcaatccaggtagtcatcctg 436 || ||||| | |||||||| ||||||||||| Sbjct: 886 ggatcaccataacaatccagatagtcatcctg 855
>gb|BT018228.1| Zea mays clone EL01N0561H08.c mRNA sequence Length = 1208 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 707 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 648 Query: 405 gggtcaccgaagcaatccaggtagtcatcctg 436 || ||||| | |||||||| ||||||||||| Sbjct: 647 ggatcaccataacaatccagatagtcatcctg 616
>gb|AF330037.1| Zea mays truncated geranylgeranyl-diphosphate synthase mRNA, partial cds Length = 1250 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 779 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 720 Query: 405 gggtcaccgaagcaatccaggtagtcatcctg 436 || ||||| | |||||||| ||||||||||| Sbjct: 719 ggatcaccataacaatccagatagtcatcctg 688
>gb|AF330036.1| Zea mays geranylgeranyl-diphosphate synthase mRNA, complete cds Length = 1399 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 928 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 869 Query: 405 gggtcaccgaagcaatccaggtagtcatcctg 436 || ||||| | |||||||| ||||||||||| Sbjct: 868 ggatcaccataacaatccagatagtcatcctg 837
>gb|AY108110.1| Zea mays PCO074380 mRNA sequence Length = 1453 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 928 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 869 Query: 405 gggtcaccgaagcaatccaggtagtcatcctg 436 || ||||| | |||||||| ||||||||||| Sbjct: 868 ggatcaccataacaatccagatagtcatcctg 837
>ref|XM_363065.1| Magnaporthe grisea 70-15 hypothetical protein (MG08649.4) partial cds Length = 1047 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 524 ggcaaccggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggtac 581 |||||| |||||||||||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 612 ggcaacgggcaggtagaaggagtagtaggccgtcttgtagatgacaatgaagcggtac 555
>gb|AY110411.1| Zea mays CL242_1 mRNA sequence Length = 2504 Score = 63.9 bits (32), Expect = 7e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| ||||||||| || ||||||||||| ||||| ||||| | ||||||||| | || | Sbjct: 929 acaactagccaggaacatttgtagtcttcaatgtcagttccgatcttgccaatgaattca 870 Query: 405 gggtcaccgaagcaatccaggtagtcatcctg 436 || ||||| || ||||| || ||||||||||| Sbjct: 869 ggatcaccaaaacaatctagatagtcatcctg 838
>ref|NM_192229.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 357 gagcacttgtagtcttctatgtctgttccaaccttgccaataa 399 ||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 803 gagcacttgtagtcttcaatgtccgttccaatcttgccaataa 761 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 525 gcaaccggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggt 579 |||||||| || ||||| |||||||| | |||||||||| ||||||||||||| Sbjct: 635 gcaaccggaagatagaatgagtagtaagctgtcttgtactgaacaatgcggcggt 581
>dbj|AK061657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D06, full insert sequence Length = 1332 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 357 gagcacttgtagtcttctatgtctgttccaaccttgccaataa 399 ||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 887 gagcacttgtagtcttcaatgtccgttccaatcttgccaataa 845 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 525 gcaaccggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggt 579 |||||||| || ||||| |||||||| | |||||||||| ||||||||||||| Sbjct: 719 gcaaccggaagatagaatgagtagtaagctgtcttgtactgaacaatgcggcggt 665
>dbj|D85317.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl pyrophosphate synthase, complete cds Length = 1289 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 357 gagcacttgtagtcttctatgtctgttccaaccttgccaataa 399 ||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 844 gagcacttgtagtcttcaatgtccgttccaatcttgccaataa 802 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 525 gcaaccggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggt 579 |||||||| || ||||| |||||||| | |||||||||| ||||||||||||| Sbjct: 676 gcaaccggaagatagaatgagtagtaagctgtcttgtactgaacaatgcggcggt 622
>gb|BT009271.1| Triticum aestivum clone wlk8.pk0009.f9:fis, full insert mRNA sequence Length = 1301 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaata 398 |||||| |||||||||||||| ||||| ||||||| |||||||||| Sbjct: 858 ccaggaacacttgtagtcttcaatgtcagttccaatcttgccaata 813
>emb|BX005429.13| Zebrafish DNA sequence from clone DKEY-85K15 in linkage group 16, complete sequence Length = 173571 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 404 agggtcaccgaagcaatccaggtagtcatcctgt 437 ||||||||| |||||||||||||||||||||||| Sbjct: 95906 agggtcaccaaagcaatccaggtagtcatcctgt 95939
>gb|AY966012.1| Vitis vinifera farnesyl diphosphate synthase mRNA, complete cds Length = 1026 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 393 ccaataacttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagact 452 ||||| ||||| ||||||||||| |||||||| || |||||||||| ||||| |||| | Sbjct: 731 ccaatcacttgggggtcaccgaaacaatccagataatcatcctgtacttgaaaatagatt 672 Query: 453 cccat 457 ||||| Sbjct: 671 cccat 667
>gb|AF390138.1|AF390138 X Citrofortunella microcarpa farnesyldiphosphate synthase (FPS1) mRNA, complete cds Length = 1392 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 360 cacttgtagtcttctatgtctgttccaaccttgccaataactt 402 |||||||| ||||| || || |||||||||||||||||||||| Sbjct: 866 cacttgtaatcttcaatatcagttccaaccttgccaataactt 824
>gb|AF384040.1|AF384040 Mentha x piperita farnesyl diphosphate synthase mRNA, complete cds Length = 1427 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 408 tcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccat 457 |||||||||||||| | |||||||||||||| |||||||| | |||||| Sbjct: 838 tcaccgaagcaatctaagtagtcatcctgtacttgaaagtatattcccat 789 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 525 gcaaccggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcg 577 ||||| || ||||| || |||||||||| |||||||||| ||||||||||| Sbjct: 721 gcaactggaaggtaaaatgagtagtaggcagtcttgtactgaacaatgcggcg 669
>gb|AF164026.1|AF164026 Xanthoceras sorbifolium farnesyl pyrophosphate synthase (FPS) mRNA, partial cds Length = 449 Score = 52.0 bits (26), Expect = 0.003 Identities = 86/106 (81%) Strand = Plus / Minus Query: 357 gagcacttgtagtcttctatgtctgttccaaccttgccaataacttgagggtcaccgaag 416 ||||||||| | ||||| || || ||||||||||| ||||| |||| || |||| || Sbjct: 190 gagcacttgaaatcttcaatatcagttccaaccttaccaatcacttcgggagcaccaaaa 131 Query: 417 caatccaggtagtcatcctgtatctgaaagtagactcccatctcaa 462 |||||||| || |||||||||| ||||| |||| |||||| |||| Sbjct: 130 caatccagataatcatcctgtacttgaaaatagattcccatgtcaa 85
>gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosome 3, complete sequence Length = 168853 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 137618 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 137658
>gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome 3, complete sequence Length = 218929 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 88674 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 88714
>emb|CT010365.1| Mus musculus full open reading frame cDNA clone RZPDo836B0753D for gene Fdps, Farnesyl diphosphate synthetase; complete cds, incl. stopcodon Length = 1062 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 626 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 586
>emb|Y12072.1|CAFPS1 G.arboreum mRNA for farnesyl pyrophosphate synthase Length = 1286 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 414 aagcaatccaggtagtcatcctgtatctgaaagtagactcccatctcaa 462 |||||||||| ||||||||||||| |||||||||| |||||| |||| Sbjct: 807 aagcaatccaaatagtcatcctgtacttgaaagtagattcccatgtcaa 759
>emb|X82543.1|PAFPS2 P.argentatum mRNA for farnesyl diphosphate synthase (FPS2) Length = 1233 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaat 397 |||| |||||| |||||||| ||||||| ||||||||||||| ||| ||||| Sbjct: 810 acaactagccacgagcacttaaagtcttcaatgtctgttccaatctttccaat 758
>gb|AF309508.1| Mus musculus farnesyl pyrophosphate synthase (Fpps) mRNA, complete cds Length = 1168 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 659 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 619
>dbj|AK140881.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130055P22 product:farnesyl diphosphate synthetase, full insert sequence Length = 1233 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 746 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 706
>dbj|AK151742.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830036A06 product:farnesyl diphosphate synthetase, full insert sequence Length = 1170 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 683 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 643
>dbj|AK168008.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730046O10 product:farnesyl diphosphate synthetase, full insert sequence Length = 1160 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 673 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 633
>dbj|AK166026.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730029L22 product:farnesyl diphosphate synthetase, full insert sequence Length = 1160 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 673 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 633
>dbj|AK088601.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021D19 product:FARNESYL PYROPHOSPHATE SYNTHASE (EC 2.5.1.10), full insert sequence Length = 1160 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 674 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 634
>gb|BC087886.1| Mus musculus farnesyl diphosphate synthetase, mRNA (cDNA clone MGC:107162 IMAGE:6595030), complete cds Length = 1199 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 677 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 637
>gb|BC048497.1| Mus musculus farnesyl diphosphate synthetase, mRNA (cDNA clone MGC:58339 IMAGE:6531586), complete cds Length = 1252 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 732 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 692
>ref|NM_134469.2| Mus musculus farnesyl diphosphate synthetase (Fdps), mRNA Length = 1252 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 732 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 692
>emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chromosome X, complete sequence Length = 220201 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | |||||||||||||||||| Sbjct: 183311 ggcaggtagaaagagtagaaagccgtcttgtacttgacaat 183351
>ref|XM_474180.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 48.1 bits (24), Expect = 0.039 Identities = 87/108 (80%) Strand = Plus / Minus Query: 338 agcctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaat 397 |||||| || |||| |||||| ||||| | ||||| ||||| ||||||| |||||| || Sbjct: 1020 agcctgtactattaaccaggaacacttatgatcttcgatgtcagttccaatcttgcctat 961 Query: 398 aacttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaa 445 | ||||||| | || || |||| ||||||||||||||||||||| Sbjct: 960 ggtgttagggtcagcaaaacagtccaagtagtcatcctgtatctgaaa 913 Score = 48.1 bits (24), Expect = 0.039 Identities = 45/52 (86%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggtaccctt 585 ||||| ||||||||||| | ||||||||||| |||||||| ||||| |||| Sbjct: 824 aggtaaaaggagtagtacgctgtcttgtacttaacaatgcgacggtagcctt 773
>ref|XM_956448.1| Neurospora crassa OR74A FARNESYL PYROPHOSPHATE SYNTHETASE (FPP SYNTHETASE) (FPS) (FARNESYL DIPHOSPHATE SYNTHETASE) [INCLUDES: DIMETHYLALLYLTRANSFERASE > (NCU01175.1) partial mRNA Length = 1044 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgta 562 ||||||||||| |||||||||| ||||||||| Sbjct: 602 ggcaggtagaacgagtagtaggccgtcttgta 571
>ref|XM_326667.1| Neurospora crassa OR74A FARNESYL PYROPHOSPHATE SYNTHETASE (FPP SYNTHETASE) (FPS) (FARNESYL DIPHOSPHATE SYNTHETASE) [INCLUDES: DIMETHYLALLYLTRANSFERASE > (NCU01175.1) partial mRNA Length = 1044 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgta 562 ||||||||||| |||||||||| ||||||||| Sbjct: 602 ggcaggtagaacgagtagtaggccgtcttgta 571
>emb|X96944.1|NCFPPSGEN Neurospora crassa FPPS gene for farnesyl pyrophosphate synthetase, strain Oak ridge 74-OR23A Length = 2034 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgta 562 ||||||||||| |||||||||| ||||||||| Sbjct: 1175 ggcaggtagaacgagtagtaggccgtcttgta 1144
>emb|X96942.1|CPFPPSGEN Claviceps purpurea partial FPPS gene for farnesyl pyrophosphate synthetase Length = 635 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgta 562 |||||||| ||||||||||||| ||||||||| Sbjct: 461 ggcaggtaaaaggagtagtaggccgtcttgta 430
>emb|X82542.1|PAFPS1 P.argentatum mRNA for farnesyl diphosphate synthase (FPS1) Length = 1283 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaataac 400 |||||| ||||| ||||||| ||||||||||||| ||| |||||||| Sbjct: 827 ccaggaacacttaaagtcttcaatgtctgttccaatctttccaataac 780
>emb|AL670009.1|NC123A4 Neurospora crassa DNA linkage group V cosmid contig 123A4 Length = 153794 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 531 ggcaggtagaaggagtagtaggacgtcttgta 562 ||||||||||| |||||||||| ||||||||| Sbjct: 11837 ggcaggtagaacgagtagtaggccgtcttgta 11868
>gb|DQ059550.1| Panax notoginseng farnesyl pyrophosphate synthase mRNA, complete cds Length = 1409 Score = 48.1 bits (24), Expect = 0.039 Identities = 69/84 (82%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttgagggtcacc 412 ||||||||||||| | ||||| || ||||| |||| ||| ||||| || | ||| |||| Sbjct: 906 ccaggagcacttgaaatcttcaatatctgtgccaatctttccaatcacctcaggtgcacc 847 Query: 413 gaagcaatccaggtagtcatcctg 436 ||||||||||| || |||||||| Sbjct: 846 aaagcaatccagataatcatcctg 823
>dbj|AK072747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023137P20, full insert sequence Length = 1367 Score = 48.1 bits (24), Expect = 0.039 Identities = 87/108 (80%) Strand = Plus / Minus Query: 338 agcctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaat 397 |||||| || |||| |||||| ||||| | ||||| ||||| ||||||| |||||| || Sbjct: 1024 agcctgtactattaaccaggaacacttatgatcttcgatgtcagttccaatcttgcctat 965 Query: 398 aacttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaa 445 | ||||||| | || || |||| ||||||||||||||||||||| Sbjct: 964 ggtgttagggtcagcaaaacagtccaagtagtcatcctgtatctgaaa 917 Score = 48.1 bits (24), Expect = 0.039 Identities = 45/52 (86%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggtaccctt 585 ||||| ||||||||||| | ||||||||||| |||||||| ||||| |||| Sbjct: 828 aggtaaaaggagtagtacgctgtcttgtacttaacaatgcgacggtagcctt 777
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 357 gagcacttgtagtcttctatgtctgttccaa 387 ||||||||||||||||| ||||| ||||||| Sbjct: 29155033 gagcacttgtagtcttcaatgtccgttccaa 29155003 Score = 40.1 bits (20), Expect = 9.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 528 accggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggt 579 ||||| || ||||| |||||||| | |||||||||| ||||||||||||| Sbjct: 29154563 accggaagatagaatgagtagtaagctgtcttgtactgaacaatgcggcggt 29154512 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 cttggcgccggtgtgggtgg 627 |||||||||||||||||||| Sbjct: 6395977 cttggcgccggtgtgggtgg 6395996
>gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complete sequence Length = 137557 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ttcttcaaaaagatctttaaaat 142 ||||||||||||||||||||||| Sbjct: 38573 ttcttcaaaaagatctttaaaat 38595
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 357 gagcacttgtagtcttctatgtctgttccaa 387 ||||||||||||||||| ||||| ||||||| Sbjct: 115399 gagcacttgtagtcttcaatgtccgttccaa 115369 Score = 40.1 bits (20), Expect = 9.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 528 accggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggt 579 ||||| || ||||| |||||||| | |||||||||| ||||||||||||| Sbjct: 114929 accggaagatagaatgagtagtaagctgtcttgtactgaacaatgcggcggt 114878
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 357 gagcacttgtagtcttctatgtctgttccaa 387 ||||||||||||||||| ||||| ||||||| Sbjct: 820 gagcacttgtagtcttcaatgtccgttccaa 790 Score = 40.1 bits (20), Expect = 9.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 528 accggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggt 579 ||||| || ||||| |||||||| | |||||||||| ||||||||||||| Sbjct: 350 accggaagatagaatgagtagtaagctgtcttgtactgaacaatgcggcggt 299
>dbj|AB021747.1| Oryza sativa (japonica cultivar-group) FPPS1 gene for farnesyl diphosphate synthase, complete cds Length = 7423 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 357 gagcacttgtagtcttctatgtctgttccaa 387 ||||||||||||||||| ||||| ||||||| Sbjct: 5337 gagcacttgtagtcttcaatgtccgttccaa 5307 Score = 40.1 bits (20), Expect = 9.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 528 accggcaggtagaaggagtagtaggacgtcttgtacttgacaatgcggcggt 579 ||||| || ||||| |||||||| | |||||||||| ||||||||||||| Sbjct: 4866 accggaagatagaatgagtagtaagctgtcttgtactgaacaatgcggcggt 4815
>ref|NM_192180.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 44.1 bits (22), Expect = 0.62 Identities = 94/118 (79%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| || |||||| | ||||| ||||| |||| | ||||||||||| || Sbjct: 809 acaaatagccaagaacacttgaaatcttcaatgtcacttcctatcttgccaataatttct 750 Query: 405 gggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctcaa 462 || ||||| || || ||||| || |||||||| | |||||||| || |||||||||| Sbjct: 749 ggttcaccaaaacagtccagataatcatcctggctttgaaagtaaacacccatctcaa 692
>ref|XM_513857.1| PREDICTED: Pan troglodytes LOC457366 (LOC457366), mRNA Length = 5256 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 1118 aggtagaaggagtagaaagctgtcttgtacttgacaat 1081
>ref|NM_002004.2| Homo sapiens farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (FDPS), mRNA Length = 1345 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 829 aggtagaaggagtagaaagctgtcttgtacttgacaat 792
>ref|XM_386960.1| Gibberella zeae PH-1 chromosome 4 FPPS_GIBFU Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) (FG06784.1) partial mRNA Length = 1044 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 525 gcaaccggcaggtagaaggagtagtaggacgtcttgta 562 ||||| || ||||||||||||||||||| |||||||| Sbjct: 608 gcaacagggaggtagaaggagtagtaggcggtcttgta 571
>ref|XM_537252.2| PREDICTED: Canis familiaris similar to farnesyl diphosphate synthase (LOC480129), mRNA Length = 1306 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 |||||||| |||||| ||| |||||| ||||||||||| Sbjct: 824 aggtagaatgagtagaaggccgtcttatacttgacaat 787
>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a novel pseudogene, a farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (FDPS) pseudogene, a novel gene (LOC339476) and the 5' end of a solute carrier family 4 (anion exchanger) member 1 adaptor protein (SLC4A1AP) pseudogene, complete sequence Length = 190912 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 45654 aggtagaaggagtagaaagctgtcttgtacttgacaat 45617
>emb|AL139410.20| Human DNA sequence from clone RP11-21N7 on chromosome 1 Contains the FDPS gene for farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), two novel genes, the gene for a novel protein (FLJ35976), the RUSC1 gene for RUN and SH3 domain containing 1, the 3' end of the ASH1L gene for ash1 (absent, small, or homeotic)-like (Drosophila), a POU domain class 5 transcription factor 1 (POU5F1) pseudogene and a CpG island, complete sequence Length = 166288 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 13664 aggtagaaggagtagaaagctgtcttgtacttgacaat 13627
>gb|BC010004.2| Homo sapiens farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), mRNA (cDNA clone MGC:15352 IMAGE:4132071), complete cds Length = 1345 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 829 aggtagaaggagtagaaagctgtcttgtacttgacaat 792
>emb|CR858871.1| Pongo pygmaeus mRNA; cDNA DKFZp469H2110 (from clone DKFZp469H2110) Length = 1395 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 883 aggtagaaggagtagaaagctgtcttgtacttgacaat 846
>emb|CR625993.1| full-length cDNA clone CS0DA004YP09 of Neuroblastoma of Homo sapiens (human) Length = 1111 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 647 aggtagaaggagtagaaagctgtcttgtacttgacaat 610
>dbj|AK125510.1| Homo sapiens cDNA FLJ43522 fis, clone PLACE5000260 Length = 3475 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 1429 aggtagaaggagtagaaagctgtcttgtacttgacaat 1466
>emb|CR599124.1| full-length cDNA clone CS0DI030YH15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1330 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 865 aggtagaaggagtagaaagctgtcttgtacttgacaat 828
>emb|CR598280.1| full-length cDNA clone CS0DC021YB09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1456 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 970 aggtagaaggagtagaaagctgtcttgtacttgacaat 933
>emb|CR596980.1| full-length cDNA clone CS0DB007YL18 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1198 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 731 aggtagaaggagtagaaagctgtcttgtacttgacaat 694
>emb|CR590457.1| full-length cDNA clone CS0DE014YE20 of Placenta of Homo sapiens (human) Length = 1178 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 701 aggtagaaggagtagaaagctgtcttgtacttgacaat 664
>ref|NM_001015867.1| Xenopus tropicalis MGC108224 protein (MGC108224), mRNA Length = 2147 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| ||| | | |||||||||||||||||| Sbjct: 687 aggtagaaggaatagaacgccgtcttgtacttgacaat 650
>gb|BC090384.1| Xenopus tropicalis MGC108224 protein, mRNA (cDNA clone MGC:108224 IMAGE:7016997), complete cds Length = 2147 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| ||| | | |||||||||||||||||| Sbjct: 687 aggtagaaggaatagaacgccgtcttgtacttgacaat 650
>gb|AC093132.2| Papio anubis clone RP41-51M7, complete sequence Length = 167185 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 143713 aggtagaaggagtagaaagctgtcttgtacttgacaat 143750
>dbj|D14697.1|HUMORF14 Homo sapiens KIAA1293 mRNA, partial cds Length = 1430 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 935 aggtagaaggagtagaaagctgtcttgtacttgacaat 898
>dbj|AK099451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022H18, full insert sequence Length = 1079 Score = 44.1 bits (22), Expect = 0.62 Identities = 94/118 (79%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| || |||||| | ||||| ||||| |||| | ||||||||||| || Sbjct: 678 acaaatagccaagaacacttgaaatcttcaatgtcacttcctatcttgccaataatttct 619 Query: 405 gggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctcaa 462 || ||||| || || ||||| || |||||||| | |||||||| || |||||||||| Sbjct: 618 ggttcaccaaaacagtccagataatcatcctggctttgaaagtaaacacccatctcaa 561
>gb|AY461811.1| Taxus x media farnesyl diphosphate synthase mRNA, complete cds Length = 1464 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 393 ccaataacttgagggtcaccgaagcaatccaggtagtcatcctgta 438 |||||||||||||| ||||| |||||||| || || ||||| |||| Sbjct: 855 ccaataacttgaggatcaccaaagcaatcgagataatcatcttgta 810
>gb|J05262.1|HUMFAPS Human farnesyl pyrophosphate synthetase mRNA, complete cds Length = 1148 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 629 aggtagaaggagtagaaagctgtcttgtacttgacaat 592
>gb|M29863.1|HUMFAPYSY Human farnesyl pyrophosphate synthetase mRNA (hpt807), 3' end Length = 1098 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||||||| | | ||||||||||||||||| Sbjct: 603 aggtagaaggagtagaaagctgtcttgtacttgacaat 566
>dbj|AB053487.1| Humulus lupulus fpps mRNA for farnesyl pyrophophate synthase, complete cds Length = 1029 Score = 44.1 bits (22), Expect = 0.62 Identities = 67/82 (81%) Strand = Plus / Minus Query: 357 gagcacttgtagtcttctatgtctgttccaaccttgccaataacttgagggtcaccgaag 416 ||||||||| ||||||| || ||||| |||| ||||||||| || | |||| || || Sbjct: 770 gagcacttgaagtcttcaatatctgtaccaatcttgccaattacatctgggtggccaaaa 711 Query: 417 caatccaggtagtcatcctgta 438 ||||||| ||||||||||||| Sbjct: 710 caatccaaatagtcatcctgta 689
>gb|BC085702.1| Rattus norvegicus cDNA clone MGC:93187 IMAGE:7189201, complete cds Length = 2120 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 626 ggtgatgaggtccagcatctg 646 ||||||||||||||||||||| Sbjct: 760 ggtgatgaggtccagcatctg 740
>ref|NM_138519.1| Rattus norvegicus dickkopf homolog 3 (Xenopus laevis) (Dkk3), mRNA Length = 3262 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 626 ggtgatgaggtccagcatctg 646 ||||||||||||||||||||| Sbjct: 766 ggtgatgaggtccagcatctg 746
>gb|AC146034.4| Pan troglodytes BAC clone RP43-16G9 from 7, complete sequence Length = 156208 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaa 570 ||||||||||||||| | | |||||||||||||||| Sbjct: 47087 aggtagaaggagtagaaagctgtcttgtacttgacaa 47123
>gb|BC050292.1| Homo sapiens MGC44478, mRNA (cDNA clone MGC:44478 IMAGE:5298330), complete cds Length = 3725 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaa 570 ||||||||||||||| | | |||||||||||||||| Sbjct: 3193 aggtagaaggagtagaaagctgtcttgtacttgacaa 3157
>ref|XR_002582.1| PREDICTED: Mus musculus similar to farnesyl diphosphate synthetase (LOC544723), mRNA Length = 1113 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | ||||||||||||||||| Sbjct: 590 ggcaggtagaaagagtagaaagctgtcttgtacttgacaat 550
>ref|XM_542241.2| PREDICTED: Canis familiaris similar to piwi-like 4 (LOC485123), mRNA Length = 3222 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 tcttcaaaaagatctttaaaa 141 ||||||||||||||||||||| Sbjct: 857 tcttcaaaaagatctttaaaa 877
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gtcgatggttgaaaccaggtg 190 ||||||||||||||||||||| Sbjct: 113903 gtcgatggttgaaaccaggtg 113883
>gb|AC147546.1| Rattus norvegicus chromosome 1 clone RP32-323A19 map q33, complete sequence Length = 118946 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 626 ggtgatgaggtccagcatctg 646 ||||||||||||||||||||| Sbjct: 82661 ggtgatgaggtccagcatctg 82681
>gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosome 10, complete sequence Length = 194018 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | ||||||||||||||||| Sbjct: 33726 ggcaggtagaaagagtagaaagctgtcttgtacttgacaat 33686
>gb|AC114737.3| Homo sapiens BAC clone CTD-2192D1 from 7, complete sequence Length = 99227 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaa 570 ||||||||||||||| | | |||||||||||||||| Sbjct: 42456 aggtagaaggagtagaaagctgtcttgtacttgacaa 42492
>ref|XM_503599.1| Yarrowia lipolytica CLIB122, YALI0E05753g predicted mRNA Length = 1035 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 526 caaccggcaggtagaaggagtagta 550 |||| |||||||||||||||||||| Sbjct: 598 caacgggcaggtagaaggagtagta 574
>gb|AC121336.3| Homo sapiens 12 BAC RP11-134P3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171437 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 aaggatcgtctacttctttct 109 ||||||||||||||||||||| Sbjct: 44176 aaggatcgtctacttctttct 44156
>emb|CR604759.1| full-length cDNA clone CS0DF013YK24 of Fetal brain of Homo sapiens (human) Length = 796 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ctgtatttaaggtttctccat 63 ||||||||||||||||||||| Sbjct: 52 ctgtatttaaggtttctccat 72
>ref|XR_001108.1| PREDICTED: Homo sapiens MGC44478 (LOC619190), misc RNA Length = 4407 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaa 570 ||||||||||||||| | | |||||||||||||||| Sbjct: 3895 aggtagaaggagtagaaagctgtcttgtacttgacaa 3859
>ref|XR_001070.1| PREDICTED: Homo sapiens MGC44478 (LOC619190), misc RNA Length = 4407 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaa 570 ||||||||||||||| | | |||||||||||||||| Sbjct: 3895 aggtagaaggagtagaaagctgtcttgtacttgacaa 3859
>ref|XM_935690.1| PREDICTED: Homo sapiens similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) (LOC641786), mRNA Length = 4405 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaa 570 ||||||||||||||| | | |||||||||||||||| Sbjct: 3893 aggtagaaggagtagaaagctgtcttgtacttgacaa 3857
>ref|XM_499334.2| PREDICTED: Homo sapiens similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) (LOC441261), mRNA Length = 4405 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaa 570 ||||||||||||||| | | |||||||||||||||| Sbjct: 3893 aggtagaaggagtagaaagctgtcttgtacttgacaa 3857
>gb|AC005522.2| Homo sapiens PAC clone RP5-1129E22 from 7, complete sequence Length = 149605 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaa 570 ||||||||||||||| | | |||||||||||||||| Sbjct: 30650 aggtagaaggagtagaaagctgtcttgtacttgacaa 30614
>gb|AC007338.6| Homo sapiens chromosome 16 clone RP11-283C7, complete sequence Length = 185281 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 615 ccggtgtgggtggtgatgagg 635 ||||||||||||||||||||| Sbjct: 138793 ccggtgtgggtggtgatgagg 138813
>gb|AC018845.7| Homo sapiens chromosome 16 clone RP11-169E6, complete sequence Length = 176184 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 615 ccggtgtgggtggtgatgagg 635 ||||||||||||||||||||| Sbjct: 97960 ccggtgtgggtggtgatgagg 97940
>gb|AF245040.1|AF245040 Rattus norvegicus substrate binding subunit of type II 5'-deiodinase D2p29 mRNA, complete cds Length = 3262 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 626 ggtgatgaggtccagcatctg 646 ||||||||||||||||||||| Sbjct: 766 ggtgatgaggtccagcatctg 746
>ref|XM_579647.1| PREDICTED: Rattus norvegicus dickkopf homolog 3 (Xenopus laevis) (Dkk3), mRNA Length = 3241 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 626 ggtgatgaggtccagcatctg 646 ||||||||||||||||||||| Sbjct: 765 ggtgatgaggtccagcatctg 745
>gb|AC093540.3| Pan troglodytes clone RP43-84M6, complete sequence Length = 171092 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 534 aggtagaaggagtagtaggacgtcttgtacttgacaa 570 ||||||||||||||| | | |||||||||||||||| Sbjct: 108134 aggtagaaggagtagaaagctgtcttgtacttgacaa 108170
>gb|AC007182.3|AC007182 Homo sapiens chromosome 14 clone BAC 507E23 map 14q24.3, complete sequence Length = 192389 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ctgtatttaaggtttctccat 63 ||||||||||||||||||||| Sbjct: 163861 ctgtatttaaggtttctccat 163841
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence Length = 174449 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | ||||||||||||||||| Sbjct: 10991 ggcaggtagaaagagtagaaagctgtcttgtacttgacaat 11031
>emb|AL844588.17| Mouse DNA sequence from clone RP23-244N6 on chromosome 2, complete sequence Length = 142422 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gctccttataaacattcttca 258 ||||||||||||||||||||| Sbjct: 105841 gctccttataaacattcttca 105821
>gb|AY609787.1| Sus scrofa clone Clu_31013.scr.msk.p1.Contig2, mRNA sequence Length = 1583 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 531 ggcaggtagaaggagtagtaggacgtcttgtacttgacaat 571 ||||||||||| |||||| | | ||||||||||||||||| Sbjct: 1075 ggcaggtagaaagagtagaaagctgtcttgtacttgacaat 1035
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 526 caaccggcaggtagaaggagtagta 550 |||| |||||||||||||||||||| Sbjct: 641740 caacgggcaggtagaaggagtagta 641764
>gb|AC152058.8| Mus musculus BAC clone RP24-327D15 from chromosome 10, complete sequence Length = 204754 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 113 ataaatcttcttcaaaaagatctttaaaa 141 ||||||||| ||||||||||| ||||||| Sbjct: 52159 ataaatctttttcaaaaagatttttaaaa 52187
>ref|NM_202836.1| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.2 mRNA, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccatagttctcgtatagtat 307 |||||||||||||||||||| Sbjct: 899 ccatagttctcgtatagtat 880 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 396 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 834 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 791
>ref|NM_117823.2| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.1 mRNA, complete cds Length = 1278 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccatagttctcgtatagtat 307 |||||||||||||||||||| Sbjct: 886 ccatagttctcgtatagtat 867 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 396 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 821 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 778
>gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, complete sequence Length = 218747 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgtatttaaggtttctccat 63 |||||||||||||||||||| Sbjct: 11759 tgtatttaaggtttctccat 11740
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA Length = 1050 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 608 cttggcgccggtgtgggtgg 627 |||||||||||||||||||| Sbjct: 318 cttggcgccggtgtgggtgg 299
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ccggttcagcgtcgatggtt 179 |||||||||||||||||||| Sbjct: 237073 ccggttcagcgtcgatggtt 237092
>ref|XM_659032.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6520.2), mRNA Length = 936 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tcctgaagatcaagctcctt 244 |||||||||||||||||||| Sbjct: 914 tcctgaagatcaagctcctt 895
>gb|BT014068.1| Lycopersicon esculentum clone 133168F, mRNA sequence Length = 1395 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cttcaaaaagatctttaaaa 141 |||||||||||||||||||| Sbjct: 574 cttcaaaaagatctttaaaa 555
>ref|XM_532456.2| PREDICTED: Canis familiaris similar to A-kinase anchor protein 9 isoform 2 (LOC475224), mRNA Length = 12421 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ttcttcaaaaagatctttaa 139 |||||||||||||||||||| Sbjct: 1815 ttcttcaaaaagatctttaa 1796
>ref|XM_445417.1| Candida glabrata CBS138, CAGL0C05577g partial mRNA Length = 1860 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ataaatcttcttcaaaaaga 132 |||||||||||||||||||| Sbjct: 1096 ataaatcttcttcaaaaaga 1115
>gb|AC104373.4| Homo sapiens chromosome 8, clone RP11-1144P22, complete sequence Length = 89086 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 caatcagtacatttttcagc 479 |||||||||||||||||||| Sbjct: 82125 caatcagtacatttttcagc 82106
>gb|AC123861.4| Mus musculus BAC clone RP23-351E20 from chromosome 2, complete sequence Length = 198454 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 gtggaatgtactgtatttaa 52 |||||||||||||||||||| Sbjct: 129721 gtggaatgtactgtatttaa 129702
>ref|XM_757888.1| Theileria parva strain Muguga chromosome 3 farnesyl pyrophosphate synthetase (TP03_0857) partial mRNA Length = 1062 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 agctccttataaacattctt 256 |||||||||||||||||||| Sbjct: 938 agctccttataaacattctt 919
>ref|XM_718878.1| Plasmodium yoelii yoelii str. 17XNL chloroquine resistance marker protein (PY03769) partial mRNA Length = 8367 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tcttctatgtctgttccaac 388 |||||||||||||||||||| Sbjct: 35 tcttctatgtctgttccaac 16
>gb|AY123429.1|AY123426S04 Papio anubis anubis neurofibromatosis type 2 region, section 4; and merlin (NF2) gene, exons 2 through 16 and complete cds Length = 100801 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 caatcagtacatttttcagctcga 483 |||||||||||| ||||||||||| Sbjct: 2216 caatcagtacatctttcagctcga 2239
>gb|AC115802.10| Mus musculus, clone RP23-408J7, complete sequence Length = 185710 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 aatcttcttcaaaaagatctttaa 139 |||||||| ||||||||||||||| Sbjct: 40046 aatcttctacaaaaagatctttaa 40023
>emb|AL161798.23| Human DNA sequence from clone RP11-108M11 on chromosome 10 Contains the 3' end of a novel gene (FLJ37306), a novel gene and a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene, complete sequence Length = 134438 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgtatttaaggtttctccat 63 |||||||||||||||||||| Sbjct: 36063 tgtatttaaggtttctccat 36044
>emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on chromosome 13 Contains a novel pseudogene, complete sequence Length = 176797 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tgtatttaaggtttctccat 63 |||||||||||||||||||| Sbjct: 98321 tgtatttaaggtttctccat 98340
>emb|AL135934.19| Human DNA sequence from clone RP5-945I17 on chromosome 11p12-13, complete sequence Length = 93708 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgtatttaaggtttctccat 63 |||||||||||||||||||| Sbjct: 45174 tgtatttaaggtttctccat 45155
>gb|AY149028.1| Plasmodium chabaudi chabaudi strain AS clone YAC101, complete sequence Length = 80019 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 caatcagtacatttttcagc 479 |||||||||||||||||||| Sbjct: 7867 caatcagtacatttttcagc 7886
>gb|AY117354.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1060 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccatagttctcgtatagtat 307 |||||||||||||||||||| Sbjct: 839 ccatagttctcgtatagtat 820 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 396 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 774 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 731
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 acgatccggttcagcgtcga 174 |||||||||||||||||||| Sbjct: 2262537 acgatccggttcagcgtcga 2262556
>gb|AY072207.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1292 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccatagttctcgtatagtat 307 |||||||||||||||||||| Sbjct: 885 ccatagttctcgtatagtat 866 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 396 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 820 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 777
>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence Length = 558804 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ataaatcttcttcaaaaaga 132 |||||||||||||||||||| Sbjct: 537514 ataaatcttcttcaaaaaga 537533
>emb|AJ496299.1|MCI496299 Mucor circinelloides f. lusitanicus isoA gene for farnesyl pyrophosphate synthase, exons 1-6 Length = 1963 Score = 40.1 bits (20), Expect = 9.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 537 tagaaggagtagtaggacgtcttgtacttgacaatg 572 |||||||||||||||| |||||||| |||||||| Sbjct: 1168 tagaaggagtagtaggcggtcttgtagatgacaatg 1133
>gb|AC104012.11| Homo sapiens chromosome 8, clone RP11-281N10, complete sequence Length = 170668 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 caatcagtacatttttcagc 479 |||||||||||||||||||| Sbjct: 26635 caatcagtacatttttcagc 26616
>gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, complete sequence Length = 165662 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 tgaaagtagactcccatctc 460 |||||||||||||||||||| Sbjct: 104384 tgaaagtagactcccatctc 104403
>emb|X99624.2|ENLYSFGEN Emericella nidulans lysF gene for homoaconitase (exon 1-2) Length = 3444 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tcctgaagatcaagctcctt 244 |||||||||||||||||||| Sbjct: 329 tcctgaagatcaagctcctt 310
>gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, complete sequence Length = 197191 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 ttcttcaaaaagatctttaaaatc 143 ||||||||| |||||||||||||| Sbjct: 156738 ttcttcaaatagatctttaaaatc 156761
>gb|AC102945.2| Homo sapiens chromosome 8, clone CTD-2373N4, complete sequence Length = 127677 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgtatttaaggtttctccat 63 |||||||||||||||||||| Sbjct: 99116 tgtatttaaggtttctccat 99097
>gb|AC090467.6| Homo sapiens chromosome 11, clone RP11-634M17, complete sequence Length = 208525 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tgtatttaaggtttctccat 63 |||||||||||||||||||| Sbjct: 35967 tgtatttaaggtttctccat 35986
>gb|DQ087959.1| Panax ginseng farnesyl diphosphate synthase (FPS) mRNA, complete cds Length = 1343 Score = 40.1 bits (20), Expect = 9.6 Identities = 68/84 (80%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttgagggtcacc 412 ||||||||||||| | ||||| || ||||| |||| ||| ||||| || | || |||| Sbjct: 883 ccaggagcacttgaaatcttcaatatctgtgccaatcttcccaatcacctctggtgcacc 824 Query: 413 gaagcaatccaggtagtcatcctg 436 ||||||||||| || |||||||| Sbjct: 823 aaagcaatccagataatcatcctg 800
>gb|AC008483.7| Homo sapiens chromosome 5 clone CTC-406I6, complete sequence Length = 152533 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 ttcaaaaagatctttaaaat 142 |||||||||||||||||||| Sbjct: 97808 ttcaaaaagatctttaaaat 97789
>gb|AC026720.6| Homo sapiens chromosome 5 clone CTD-2193G21, complete sequence Length = 151090 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 tataaatcttcttcaaaaagatct 135 ||||||||||||||||||| |||| Sbjct: 143227 tataaatcttcttcaaaaaaatct 143250
>gb|AC008693.9| Homo sapiens chromosome 5 clone CTB-69A13, complete sequence Length = 203568 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 tataaatcttcttcaaaaagatct 135 ||||||||||||||||||| |||| Sbjct: 116663 tataaatcttcttcaaaaaaatct 116686
>gb|AC008519.5| Homo sapiens chromosome 5 clone CTC-460G13, complete sequence Length = 195979 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ttcaaaaagatctttaaaat 142 |||||||||||||||||||| Sbjct: 191508 ttcaaaaagatctttaaaat 191527
>emb|BX323883.14| Zebrafish DNA sequence from clone CH211-285M21 in linkage group 1, complete sequence Length = 195250 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 ttcaaaaagatctttaaaat 142 |||||||||||||||||||| Sbjct: 21240 ttcaaaaagatctttaaaat 21221
>emb|BX827727.1|CNS0A4KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1198 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccatagttctcgtatagtat 307 |||||||||||||||||||| Sbjct: 844 ccatagttctcgtatagtat 825 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 396 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 779 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 736
>emb|BX826432.1|CNS0A41B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 968 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccatagttctcgtatagtat 307 |||||||||||||||||||| Sbjct: 584 ccatagttctcgtatagtat 565 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 396 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 519 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 476
>gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complete sequence Length = 150942 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tttctccatagtaatcatag 74 |||||||||||||||||||| Sbjct: 8953 tttctccatagtaatcatag 8972
>gb|AC010881.8| Homo sapiens BAC clone RP11-289J14 from 2, complete sequence Length = 174927 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ggggaagacttgccatagtt 295 |||||||||||||||||||| Sbjct: 79538 ggggaagacttgccatagtt 79519
>gb|AC103959.18| Homo sapiens chromosome 8, clone GS1-211B7, complete sequence Length = 103584 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgtatttaaggtttctccat 63 |||||||||||||||||||| Sbjct: 32591 tgtatttaaggtttctccat 32572
>gb|AC104946.4| Homo sapiens chromosome 8, clone RP11-946L20, complete sequence Length = 200292 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 tgaaagtagactcccatctc 460 |||||||||||||||||||| Sbjct: 26127 tgaaagtagactcccatctc 26146
>gb|AF112881.1|AF112881 Artemisia annua farnesyl diphosphate synthase mRNA, complete cds Length = 1333 Score = 40.1 bits (20), Expect = 9.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 330 agttccatagcctggacaattagccaggagcacttgtagtcttctatgtctgttccaacc 389 ||||||| |||| ||||| || |||||||||||| ||||||| || || ||||||| | Sbjct: 873 agttccaatgccttgacaactaaccaggagcacttaaagtcttcaatatcagttccaatc 814 Query: 390 ttgccaat 397 || ||||| Sbjct: 813 tttccaat 806
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 cttggcgccggtgtgggtgg 627 |||||||||||||||||||| Sbjct: 18372 cttggcgccggtgtgggtgg 18391
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 cttggcgccggtgtgggtgg 627 |||||||||||||||||||| Sbjct: 167043 cttggcgccggtgtgggtgg 167062
>dbj|AK100273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072A14, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 9.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| ||||| ||||| ||||| ||||| || || | ||||||||||| || Sbjct: 1026 acaactagccaagagcatttgtaatcttcaatgtcagtcccgatcttgccaataaatttg 967 Query: 405 gggtcacc 412 |||||||| Sbjct: 966 gggtcacc 959
>dbj|AK073822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I20, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 9.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| ||||| ||||| ||||| ||||| || || | ||||||||||| || Sbjct: 1098 acaactagccaagagcatttgtaatcttcaatgtcagtcccgatcttgccaataaatttg 1039 Query: 405 gggtcacc 412 |||||||| Sbjct: 1038 gggtcacc 1031
>gb|AF136602.1|AF136602 Artemisia annua farnesyl diphosphate synthase (fps2) mRNA, complete cds Length = 1333 Score = 40.1 bits (20), Expect = 9.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 330 agttccatagcctggacaattagccaggagcacttgtagtcttctatgtctgttccaacc 389 ||||||| |||| ||||| || |||||||||||| ||||||| || || ||||||| | Sbjct: 873 agttccaatgccttgacaactaaccaggagcacttaaagtcttcaatatcagttccaatc 814 Query: 390 ttgccaat 397 || ||||| Sbjct: 813 tttccaat 806
>gb|AC114578.14| Mus musculus chromosome 19, clone RP23-162C4, complete sequence Length = 201229 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tgtatttaaggtttctccat 63 |||||||||||||||||||| Sbjct: 18329 tgtatttaaggtttctccat 18348
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 tgtgggtggtgatgaggtcc 638 |||||||||||||||||||| Sbjct: 1570225 tgtgggtggtgatgaggtcc 1570244
>gb|AC140282.3| Mus musculus BAC clone RP24-501L1 from 1, complete sequence Length = 206690 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 caaaaagatctttaaaatct 144 |||||||||||||||||||| Sbjct: 198714 caaaaagatctttaaaatct 198695
>gb|AC101841.5| Mus musculus chromosome 1, clone RP23-251G19, complete sequence Length = 174900 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 caaaaagatctttaaaatct 144 |||||||||||||||||||| Sbjct: 98839 caaaaagatctttaaaatct 98820
>dbj|AP006403.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16P18, TM0289, complete sequence Length = 94172 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tttctcctataaatcttctt 124 |||||||||||||||||||| Sbjct: 12506 tttctcctataaatcttctt 12487
>gb|L46349.1|ATHFPS2R Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) mRNA, complete cds Length = 1266 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccatagttctcgtatagtat 307 |||||||||||||||||||| Sbjct: 885 ccatagttctcgtatagtat 866 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 353 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 396 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 820 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 777
>emb|AL844896.7| Mouse DNA sequence from clone RP23-356L21 on chromosome 2, complete sequence Length = 83203 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 ataaatcttcttcaaaaagatctt 136 |||||||||||||||||| ||||| Sbjct: 48230 ataaatcttcttcaaaaaaatctt 48253
>emb|AL163613.2|CNS01RIJ Human chromosome 14 DNA sequence BAC R-25I19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 150312 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ggaatgtactgtatttaagg 54 |||||||||||||||||||| Sbjct: 105639 ggaatgtactgtatttaagg 105658
>emb|AL359396.5|CNS05TEU Human chromosome 14 DNA sequence BAC R-314P15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163795 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 tacttctttctcctataaatcttc 122 ||||||||||||||||| |||||| Sbjct: 131628 tacttctttctcctatatatcttc 131605
>emb|AL929046.9| Mouse DNA sequence from clone RP23-308N4 on chromosome 2, complete sequence Length = 181337 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gtggaatgtactgtatttaa 52 |||||||||||||||||||| Sbjct: 160591 gtggaatgtactgtatttaa 160610
>gb|AY162472.1| Eucommia ulmoides farnesyl pyrophosphate synthetase mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 9.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 369 tcttctatgtctgttccaaccttgccaataacttgagggtcaccgaagcaatccaggtag 428 ||||| || |||| ||||| ||| ||||| || | ||| ||||| || ||||||||||| Sbjct: 839 tcttcaatatctgatccaatctttccaatcacctcaggatcaccaaaacaatccaggtaa 780 Query: 429 tcatcctg 436 |||||||| Sbjct: 779 tcatcctg 772
>dbj|AB052680.1| Eucommia ulmoides EUFPS1 mRNA for putative FPP synthase 1, complete cds Length = 1264 Score = 40.1 bits (20), Expect = 9.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 369 tcttctatgtctgttccaaccttgccaataacttgagggtcaccgaagcaatccaggtag 428 ||||| || |||| ||||| ||| ||||| || | ||| ||||| || ||||||||||| Sbjct: 846 tcttcaatatctgatccaatctttccaatcacctcaggatcaccaaaacaatccaggtaa 787 Query: 429 tcatcctg 436 |||||||| Sbjct: 786 tcatcctg 779
>dbj|AB021979.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl diphosphate synthase, partial cds Length = 725 Score = 40.1 bits (20), Expect = 9.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 345 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 404 |||| |||||| ||||| ||||| ||||| ||||| || || | ||||||||||| || Sbjct: 315 acaactagccaagagcatttgtaatcttcaatgtcagtcccgatcttgccaataaatttg 256 Query: 405 gggtcacc 412 |||||||| Sbjct: 255 gggtcacc 248
>dbj|AB041626.2| Eucommia ulmoides EUFPPS1 mRNA for putative FPP synthase 1, complete cds Length = 1283 Score = 40.1 bits (20), Expect = 9.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 369 tcttctatgtctgttccaaccttgccaataacttgagggtcaccgaagcaatccaggtag 428 ||||| || |||| ||||| ||| ||||| || | ||| ||||| || ||||||||||| Sbjct: 850 tcttcaatatctgatccaatctttccaatcacctcaggatcaccaaaacaatccaggtaa 791 Query: 429 tcatcctg 436 |||||||| Sbjct: 790 tcatcctg 783 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,835,489 Number of Sequences: 3902068 Number of extensions: 5835489 Number of successful extensions: 104812 Number of sequences better than 10.0: 170 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 104372 Number of HSP's gapped (non-prelim): 440 length of query: 703 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 680 effective length of database: 17,143,297,704 effective search space: 11657442438720 effective search space used: 11657442438720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
