ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal26l06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 1183 bits (597), Expect = 0.0 Identities = 597/597 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17190 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 17131 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17130 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 17071 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17070 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 17011 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17010 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 16951 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16950 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 16891 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16890 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 16831 Query: 361 ctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16830 ctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagta 16771 Query: 421 ctccccccgaaataatataagaacatttaaaacactactttagtaatctaaacgctttta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16770 ctccccccgaaataatataagaacatttaaaacactactttagtaatctaaacgctttta 16711 Query: 481 tattaatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatatt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16710 tattaatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatatt 16651 Query: 541 cacacgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16650 cacacgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 16594
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 1152 bits (581), Expect = 0.0 Identities = 593/597 (99%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11209 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 11150 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11149 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 11090 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11089 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 11030 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 11029 tggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactc 10970 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10969 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 10910 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10909 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 10850 Query: 361 ctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10849 ctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagta 10790 Query: 421 ctccccccgaaataatataagaacatttaaaacactactttagtaatctaaacgctttta 480 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 10789 ctccccccgaaataatataagaacatttagaacactactttagtaatttaaacgctttta 10730 Query: 481 tattaatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatatt 540 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10729 tattagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatatt 10670 Query: 541 cacacgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10669 cacacgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 10613
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 1152 bits (581), Expect = 0.0 Identities = 593/597 (99%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62930 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 62871 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62870 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 62811 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62810 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 62751 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 62750 tggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactc 62691 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62690 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 62631 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62630 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 62571 Query: 361 ctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62570 ctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagta 62511 Query: 421 ctccccccgaaataatataagaacatttaaaacactactttagtaatctaaacgctttta 480 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 62510 ctccccccgaaataatataagaacatttagaacactactttagtaatttaaacgctttta 62451 Query: 481 tattaatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatatt 540 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62450 tattagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatatt 62391 Query: 541 cacacgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62390 cacacgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 62334
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 1152 bits (581), Expect = 0.0 Identities = 593/597 (99%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11979 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 11920 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11919 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 11860 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11859 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 11800 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 11799 tggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactc 11740 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11739 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 11680 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11679 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 11620 Query: 361 ctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11619 ctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagta 11560 Query: 421 ctccccccgaaataatataagaacatttaaaacactactttagtaatctaaacgctttta 480 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 11559 ctccccccgaaataatataagaacatttagaacactactttagtaatttaaacgctttta 11500 Query: 481 tattaatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatatt 540 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11499 tattagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatatt 11440 Query: 541 cacacgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11439 cacacgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 11383
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 940 bits (474), Expect = 0.0 Identities = 474/474 (100%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 961 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 901 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 841 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 787
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 940 bits (474), Expect = 0.0 Identities = 474/474 (100%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 961 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 901 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 841 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 787
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 940 bits (474), Expect = 0.0 Identities = 474/474 (100%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 961 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 901 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 841 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 787
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 940 bits (474), Expect = 0.0 Identities = 474/474 (100%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 961 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 901 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 841 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 787
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 940 bits (474), Expect = 0.0 Identities = 474/474 (100%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 961 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 901 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 841 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 787
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 932 bits (470), Expect = 0.0 Identities = 473/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 962 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 cccccgaaataatataaaaacatttaaaacactactttagtaatctaaacgcttttatat 902 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 842 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 788
>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 924 bits (466), Expect = 0.0 Identities = 472/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 963 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 903 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 843 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 789
>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 924 bits (466), Expect = 0.0 Identities = 472/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 962 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 961 cccccgaaataatataagaacatttagaacactactttagtaatctaaacgcttttatat 902 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 842 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 788
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 924 bits (466), Expect = 0.0 Identities = 472/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 963 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 903 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 843 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 789
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 924 bits (466), Expect = 0.0 Identities = 472/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 963 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 903 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 843 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 789
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 918 bits (463), Expect = 0.0 Identities = 472/474 (99%), Gaps = 2/474 (0%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1200 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1140 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1080 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1020 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 960 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 959 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 900 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 taatttacaga--gagtattttgttactgaaatgtgtccaggacaggactgtatattcac 842 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 788
>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 916 bits (462), Expect = 0.0 Identities = 471/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 962 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 cccccgaaataatataaaaacatttaaaacactactttagtaatctaaacgcttttatat 902 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 842 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 accaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 788
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 916 bits (462), Expect = 0.0 Identities = 471/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 962 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 961 cccccgaaataatataagaacatttagaacactactttagtaatttaaacgcttttatat 902 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 842 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 788
>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box transcription factor (Vrn1) gene, partial cds Length = 1214 Score = 908 bits (458), Expect = 0.0 Identities = 470/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1155 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1095 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1035 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 975 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 915 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 914 cccccgaaataatataaaaacatttagaacactactttagtaatttaaacgcttttatat 855 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 795 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 741
>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 908 bits (458), Expect = 0.0 Identities = 470/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 963 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 962 cccccgaaataatataacaacatttaaaacattactttagtaatctaaacgcttttatat 903 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 843 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 789
>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 908 bits (458), Expect = 0.0 Identities = 470/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 963 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 962 cccccgaaataatataacaacatttaaaacattactttagtaatctaaacgcttttatat 903 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 843 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 789
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 908 bits (458), Expect = 0.0 Identities = 470/474 (99%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 962 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 961 cccccgaaataatataaaaacatttagaacactactttagtaatttaaacgcttttatat 902 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 842 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 788
>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 894 bits (451), Expect = 0.0 Identities = 469/474 (98%), Gaps = 2/474 (0%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1200 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1140 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1080 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1020 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtact- 961 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 960 -ccccgaaataatataagaacatttagaacactactttagtaatctaaacgcttttatat 902 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 842 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 acgaaaatttgattgaaagggacaccaattcaaaagatggttccttcaactcca 788
>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 892 bits (450), Expect = 0.0 Identities = 469/474 (98%), Gaps = 1/474 (0%) Strand = Plus / Minus Query: 124 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 184 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtactc 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatttagtact- 962 Query: 424 cccccgaaataatataagaacatttaaaacactactttagtaatctaaacgcttttatat 483 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 961 cccccgaaataatataaaaacatttagaacactactttagtaatctaaacgcttttatat 902 Query: 484 taatttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 543 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 tagtttacagatggagtattttgttactgaaatgtgtccaggacaggactgtatattcac 842 Query: 544 acgaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 597 || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 accaaaaattgattgaaagggacaccaattcaaaagatggttccttcaactcca 788
>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1105 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1100 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1041 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1040 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 981 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 980 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 921 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 920 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 861 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 801 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 741 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 740 ctcgcctgccgccgctgggtgattgctg 713
>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1049 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 989 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 929 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 869 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 809 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 749 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 748 ctcgcctgccgccgctgggtgattgctg 721
>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1049 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 989 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 929 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 869 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 809 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 749 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 748 ctcgcctgccgccgctgggtgattgctg 721
>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1049 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 989 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 929 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 869 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 809 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 749 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 748 ctcgcctgccgccgctgggtgattgctg 721
>gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1112 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1053 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 993 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 933 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 932 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 873 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 872 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 813 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 753 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 752 ctcgcctgccgccgctgggtgattgctg 725
>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1049 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 989 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 929 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 869 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 809 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 749 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 748 ctcgcctgccgccgctgggtgattgctg 721
>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1049 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 989 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 929 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 869 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 809 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 749 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 748 ctcgcctgccgccgctgggtgattgctg 721
>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1049 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 989 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 929 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 869 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 809 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 749 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 748 ctcgcctgccgccgctgggtgattgctg 721
>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1049 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 989 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 929 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 869 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 809 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 749 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 748 ctcgcctgccgccgctgggtgattgctg 721
>gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, complete cds Length = 1153 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1082 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 1022 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 962 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 902 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 842 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 782 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 781 ctcgcctgccgccgctgggtgattgctg 754
>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete cds Length = 1145 Score = 769 bits (388), Expect = 0.0 Identities = 388/388 (100%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1133 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1074 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 1014 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 954 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 894 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 834 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 774 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 773 ctcgcctgccgccgctgggtgattgctg 746
>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 761 bits (384), Expect = 0.0 Identities = 387/388 (99%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1112 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1053 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 993 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 933 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 932 tggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactc 873 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 872 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 813 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 753 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 752 ctcgcctgccgccgctgggtgattgctg 725
>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 761 bits (384), Expect = 0.0 Identities = 387/388 (99%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1112 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1053 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 993 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 933 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 932 tggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactc 873 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 872 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 813 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 753 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 752 ctcgcctgccgccgctgggtgattgctg 725
>gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA, complete cds Length = 1157 Score = 761 bits (384), Expect = 0.0 Identities = 387/388 (99%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1145 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1086 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 1026 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1025 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 966 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 965 tggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactc 906 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 905 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 846 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 786 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 785 ctcgcctgccgccgctgggtgattgctg 758
>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete cds Length = 1153 Score = 761 bits (384), Expect = 0.0 Identities = 387/388 (99%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1141 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacaaataaattacat 1082 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 1022 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 962 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 902 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 842 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 782 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 781 ctcgcctgccgccgctgggtgattgctg 754
>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene) Length = 1196 Score = 745 bits (376), Expect = 0.0 Identities = 385/388 (99%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 ggagcaacggatatcatcgaaagttgaaaattcgtcactcatgctacatataaattacat 1092 Query: 61 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1091 ggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagt 1032 Query: 121 gaaatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctcca 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1031 gaaatatacacattcctgcagcttgctgctttactctgatttcttttcctctcccctcca 972 Query: 181 tggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 971 tggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactc 912 Query: 241 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 gtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccat 852 Query: 301 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 ccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccct 792 Query: 361 ctcgcctgccgccgctgggtgattgctg 388 |||||||||||||||||||||||||||| Sbjct: 791 ctcgcctgccgccgctgggtgattgctg 764
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1151 Score = 729 bits (368), Expect = 0.0 Identities = 371/372 (99%) Strand = Plus / Minus Query: 17 tcgaaagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgtac 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1129 tcgaaagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgtac 1070 Query: 77 agccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcc 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1069 agccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcc 1010 Query: 137 tgcagcttgctactttactctgatttcttttcctctcccctccatggggttagcatgttc 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 tgcagcttgctactttactctgatttcttttcctctcccctccatggggttagcatgttc 950 Query: 197 gcaaccgcatgatacaccaggctggccggtgcaacttgttactcgtactgaatagtacgc 256 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 949 gcaaccgcatgatacaccaggctggccgctgcaacttgttactcgtactgaatagtacgc 890 Query: 257 ttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgcc 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 ttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgcc 830 Query: 317 gtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgct 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 gtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgct 770 Query: 377 gggtgattgctg 388 |||||||||||| Sbjct: 769 gggtgattgctg 758
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 630 bits (318), Expect = e-177 Identities = 351/362 (96%) Strand = Plus / Minus Query: 56 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 115 ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3791 tacatggtaatttactcgtacagccatctcagcccaggtggaaaggaaactgaagtggac 3732 Query: 116 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 175 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3731 gaagtgaaatatacacattgctgcagcttgctactttactctgatttcttttcctctccc 3672 Query: 176 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 235 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3671 ctccatggggttagcgtgttcgcaaccgcatgatacaccagtctggccggtgcaacttgt 3612 Query: 236 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3611 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 3552 Query: 296 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 355 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3551 accatccacagtggaagcgccgtccggagtgggatctgaggctgcactgccacatcctct 3492 Query: 356 gccctctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 |||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3491 gccctcacgcctatcgccgctgggtgtttgctgcacaaccaaagcgaacacatgcatatt 3432 Query: 416 ta 417 || Sbjct: 3431 ta 3430 Score = 161 bits (81), Expect = 3e-36 Identities = 93/97 (95%) Strand = Plus / Minus Query: 500 tattttgttactgaaatgtgtccaggacaggactgtatattcacacgaaaaattgattga 559 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 3428 tattttgttactgaaatgtgtccaggacaggactgtatattcacaccaaaaattgactga 3369 Query: 560 aagggacaccaattcaaaagatggttccttcaactcc 596 |||||||||||||||||||||||||||| | |||||| Sbjct: 3368 aagggacaccaattcaaaagatggttccatgaactcc 3332 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattac 58 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3940 ggagctacgggtatcatggaaagttgaaaattcgtcactcatgctacatataaattac 3883
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 630 bits (318), Expect = e-177 Identities = 351/362 (96%) Strand = Plus / Minus Query: 56 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 115 ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3839 tacatggtaatttactcgtacagccatctcagcccaggtggaaaggaaactgaagtggac 3780 Query: 116 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 175 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3779 gaagtgaaatatacacattgctgcagcttgctactttactctgatttcttttcctctccc 3720 Query: 176 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 235 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3719 ctccatggggttagcgtgttcgcaaccgcatgatacaccagtctggccggtgcaacttgt 3660 Query: 236 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3659 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 3600 Query: 296 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 355 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3599 accatccacagtggaagcgccgtccggagtgggatctgaggctgcactgccacatcctct 3540 Query: 356 gccctctcgcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 |||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3539 gccctcacgcctatcgccgctgggtgtttgctgcacaaccaaagcgaacacatgcatatt 3480 Query: 416 ta 417 || Sbjct: 3479 ta 3478 Score = 153 bits (77), Expect = 8e-34 Identities = 92/97 (94%) Strand = Plus / Minus Query: 500 tattttgttactgaaatgtgtccaggacaggactgtatattcacacgaaaaattgattga 559 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 3476 tattttgttactgaaatgtgtccaggacaggactgtatattcacaccaaaaattgactga 3417 Query: 560 aagggacaccaattcaaaagatggttccttcaactcc 596 |||||||||| ||||||||||||||||| | |||||| Sbjct: 3416 aagggacaccgattcaaaagatggttccatgaactcc 3380 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 1 ggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattac 58 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3988 ggagctacgggtatcatggaaagttgaaaattcgtcactcatgctacatataaattac 3931
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 482 bits (243), Expect = e-133 Identities = 371/411 (90%), Gaps = 2/411 (0%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 66 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 15778 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 15719 Query: 67 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 126 |||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||| Sbjct: 15718 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaaata 15659 Query: 127 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggt 186 ||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||| Sbjct: 15658 tacacatcgctgcagcttgctactttactctgatttcttttccttttccctccaaggggt 15599 Query: 187 ta-gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-gtac 244 | || || | ||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 15598 caggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctctac 15539 Query: 245 tgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccac 304 |||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 15538 tgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatccac 15479 Query: 305 agtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcg 364 |||||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||| Sbjct: 15478 ggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctcg 15419 Query: 365 cctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 |||||||||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 15418 cctgccgccgctggatgaatgctgcacaaccaaagcgaacacaagcatatt 15368 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 15293 accaattcaaaagatggttccttgaactc 15265
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 482 bits (243), Expect = e-133 Identities = 371/411 (90%), Gaps = 2/411 (0%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 66 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 15242 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 15183 Query: 67 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 126 |||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||| Sbjct: 15182 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaaata 15123 Query: 127 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggt 186 ||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||| Sbjct: 15122 tacacatcgctgcagcttgctactttactctgatttcttttccttttccctccaaggggt 15063 Query: 187 ta-gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-gtac 244 | || || | ||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 15062 caggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctctac 15003 Query: 245 tgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccac 304 |||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 15002 tgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatccac 14943 Query: 305 agtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcg 364 |||||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||| Sbjct: 14942 ggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctcg 14883 Query: 365 cctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 |||||||||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 14882 cctgccgccgctggatgaatgctgcacaaccaaagcgaacacaagcatatt 14832 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 14757 accaattcaaaagatggttccttgaactc 14729
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 482 bits (243), Expect = e-133 Identities = 371/411 (90%), Gaps = 2/411 (0%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 66 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 15763 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 15704 Query: 67 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 126 |||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||| Sbjct: 15703 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaaata 15644 Query: 127 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggt 186 ||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||| Sbjct: 15643 tacacatcgctgcagcttgctactttactctgatttcttttccttttccctccaaggggt 15584 Query: 187 ta-gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-gtac 244 | || || | ||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 15583 caggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctctac 15524 Query: 245 tgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccac 304 |||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 15523 tgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatccac 15464 Query: 305 agtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcg 364 |||||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||| Sbjct: 15463 ggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctcg 15404 Query: 365 cctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 |||||||||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 15403 cctgccgccgctggatgaatgctgcacaaccaaagcgaacacaagcatatt 15353 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 15278 accaattcaaaagatggttccttgaactc 15250
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 482 bits (243), Expect = e-133 Identities = 371/411 (90%), Gaps = 2/411 (0%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 66 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 82314 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 82255 Query: 67 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 126 |||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||| Sbjct: 82254 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaaata 82195 Query: 127 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggt 186 ||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||| Sbjct: 82194 tacacatcgctgcagcttgctactttactctgatttcttttccttttccctccaaggggt 82135 Query: 187 ta-gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-gtac 244 | || || | ||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 82134 caggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctctac 82075 Query: 245 tgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccac 304 |||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 82074 tgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatccac 82015 Query: 305 agtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcg 364 |||||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||| Sbjct: 82014 ggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctcg 81955 Query: 365 cctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 |||||||||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 81954 cctgccgccgctggatgaatgctgcacaaccaaagcgaacacaagcatatt 81904 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 81829 accaattcaaaagatggttccttgaactc 81801
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 468 bits (236), Expect = e-128 Identities = 371/412 (90%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 66 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 12425 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 12366 Query: 67 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 126 |||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||| Sbjct: 12365 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggacaaagtgaaata 12306 Query: 127 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccat-gggg 185 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 12305 tacacatcgctgcagcttgctactttactctgatttcttttcctttcccctccaaagggg 12246 Query: 186 ttag-catgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcg-ta 243 | || | || | ||||||||| ||||||||||||||||||||||||||||||| | || Sbjct: 12245 tcaggcgtgctagcaaccgcaacatacaccaggctggccggtgcaacttgttaccctcta 12186 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 ||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 12185 ctgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatcca 12126 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 | |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||| Sbjct: 12125 cggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctc 12066 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 ||||| |||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 12065 gcctgttgccgctggatgaatgctgcacaaccaaagcgaacacaagcatatt 12014 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||| ||| ||||| Sbjct: 11941 accaattcaaaagatggttacttgaactc 11913
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 468 bits (236), Expect = e-128 Identities = 371/412 (90%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 66 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 12194 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 12135 Query: 67 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 126 |||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||| Sbjct: 12134 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggacaaagtgaaata 12075 Query: 127 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccat-gggg 185 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 12074 tacacatcgctgcagcttgctactttactctgatttcttttcctttcccctccaaagggg 12015 Query: 186 ttag-catgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcg-ta 243 | || | || | ||||||||| ||||||||||||||||||||||||||||||| | || Sbjct: 12014 tcaggcgtgctagcaaccgcaacatacaccaggctggccggtgcaacttgttaccctcta 11955 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 ||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 11954 ctgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatcca 11895 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 | |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||| Sbjct: 11894 cggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctc 11835 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 ||||| |||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 11834 gcctgttgccgctggatgaatgctgcacaaccaaagcgaacacaagcatatt 11783 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||| ||| ||||| Sbjct: 11710 accaattcaaaagatggttacttgaactc 11682
>gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN-A1) gene, complete cds; and gypsy retrotransposon Sukkula, complete sequence Length = 6730 Score = 468 bits (236), Expect = e-128 Identities = 371/412 (90%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 66 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 6691 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 6632 Query: 67 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 126 |||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||| Sbjct: 6631 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggacaaagtgaaata 6572 Query: 127 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccat-gggg 185 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 6571 tacacatcgctgcagcttgctactttactctgatttcttttcctttcccctccaaagggg 6512 Query: 186 ttag-catgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcg-ta 243 | || | || | ||||||||| ||||||||||||||||||||||||||||||| | || Sbjct: 6511 tcaggcgtgctagcaaccgcaacatacaccaggctggccggtgcaacttgttaccctcta 6452 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 ||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 6451 ctgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatcca 6392 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 | |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||| Sbjct: 6391 cggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctc 6332 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 ||||| |||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 6331 gcctgttgccgctggatgaatgctgcacaaccaaagcgaacacaagcatatt 6280 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||| ||| ||||| Sbjct: 6207 accaattcaaaagatggttacttgaactc 6179
>gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256C17 VRN-A1 (VRN-A1) gene, complete cds Length = 5065 Score = 468 bits (236), Expect = e-128 Identities = 371/412 (90%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 66 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 5026 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 4967 Query: 67 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 126 |||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||| Sbjct: 4966 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggacaaagtgaaata 4907 Query: 127 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccat-gggg 185 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 4906 tacacatcgctgcagcttgctactttactctgatttcttttcctttcccctccaaagggg 4847 Query: 186 ttag-catgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcg-ta 243 | || | || | ||||||||| ||||||||||||||||||||||||||||||| | || Sbjct: 4846 tcaggcgtgctagcaaccgcaacatacaccaggctggccggtgcaacttgttaccctcta 4787 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 ||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 4786 ctgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatcca 4727 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 | |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||| Sbjct: 4726 cggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctc 4667 Query: 364 gcctgccgccgctgggtgattgctgcacaaccaaagcgaacacatgcatatt 415 ||||| |||||||| ||| |||||||||||||||||||||||| ||||||| Sbjct: 4666 gcctgttgccgctggatgaatgctgcacaaccaaagcgaacacaagcatatt 4615 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||| ||| ||||| Sbjct: 4542 accaattcaaaagatggttacttgaactc 4514
>emb|AJ577374.1|TAE577374 Triticum aestivum partial mRNA for putative MADS-box transcription factor (mads#11 gene) Length = 770 Score = 414 bits (209), Expect = e-112 Identities = 344/385 (89%), Gaps = 3/385 (0%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 66 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 750 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 691 Query: 67 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 126 |||||||||||||||||||||||||| ||| | |||||||||||||||| ||| |||||| Sbjct: 690 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggacaaagcgaaata 631 Query: 127 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctcc-atgggg 185 ||||||| ||||||||||||||||||||||||||||||||||| |||||||| | |||| Sbjct: 630 tacacatcgctgcagcttgctactttactctgatttcttttcctttcccctccaaagggg 571 Query: 186 tta-gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-gta 243 | | || || | ||||||||| ||||||||||||||||||||||||||||||| | || Sbjct: 570 tcaggcgtgctagcaaccgcaacatacaccaggctggccggtgcaacttgttaccctcta 511 Query: 244 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 303 ||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 510 ctgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatcca 451 Query: 304 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 363 | |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||| Sbjct: 450 cggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctc 391 Query: 364 gcctgccgccgctgggtgattgctg 388 ||||| |||||||| ||| ||||| Sbjct: 390 gcctgttgccgctggatgaatgctg 366
>gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN-D1 (VRN-D1) gene, complete cds Length = 12335 Score = 396 bits (200), Expect = e-107 Identities = 295/324 (91%), Gaps = 2/324 (0%) Strand = Plus / Minus Query: 86 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 145 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 12232 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 12173 Query: 146 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 204 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 12172 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 12113 Query: 205 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 263 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12112 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 12053 Query: 264 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 323 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12052 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 11993 Query: 324 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 383 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 11992 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 11933 Query: 384 tgctgcacaaccaaagcgaacaca 407 |||||||||||||||| ||||||| Sbjct: 11932 tgctgcacaaccaaagtgaacaca 11909 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggta 64 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 12295 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 12238 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 11826 accaattcaaaagatggttccttgaactc 11798 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 498 agtattttgttactgaaatgtgtccaggacaggactgtatattca 542 |||||||||||||| ||||||| || |||||||||| ||||||| Sbjct: 11900 agtattttgttacttaaatgtggcc-cgacaggactgcatattca 11857
>gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, complete cds Length = 12224 Score = 396 bits (200), Expect = e-107 Identities = 295/324 (91%), Gaps = 2/324 (0%) Strand = Plus / Minus Query: 86 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 145 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 12121 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 12062 Query: 146 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 204 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 12061 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 12002 Query: 205 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 263 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12001 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 11942 Query: 264 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 323 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 11941 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 11882 Query: 324 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 383 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 11881 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 11822 Query: 384 tgctgcacaaccaaagcgaacaca 407 |||||||||||||||| ||||||| Sbjct: 11821 tgctgcacaaccaaagtgaacaca 11798 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggta 64 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 12184 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 12127 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 11715 accaattcaaaagatggttccttgaactc 11687 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 498 agtattttgttactgaaatgtgtccaggacaggactgtatattca 542 |||||||||||||| ||||||| || |||||||||| ||||||| Sbjct: 11789 agtattttgttacttaaatgtggcc-cgacaggactgcatattca 11746
>gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN-D1 (VRN-D1) gene, complete cds Length = 8100 Score = 396 bits (200), Expect = e-107 Identities = 295/324 (91%), Gaps = 2/324 (0%) Strand = Plus / Minus Query: 86 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 145 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 7997 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 7938 Query: 146 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 204 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 7937 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 7878 Query: 205 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 263 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 7877 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 7818 Query: 264 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 323 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 7817 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 7758 Query: 324 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 383 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 7757 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 7698 Query: 384 tgctgcacaaccaaagcgaacaca 407 |||||||||||||||| ||||||| Sbjct: 7697 tgctgcacaaccaaagtgaacaca 7674 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggta 64 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 8060 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 8003 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 7591 accaattcaaaagatggttccttgaactc 7563 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 498 agtattttgttactgaaatgtgtccaggacaggactgtatattca 542 |||||||||||||| ||||||| || |||||||||| ||||||| Sbjct: 7665 agtattttgttacttaaatgtggcc-cgacaggactgcatattca 7622
>gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 389 bits (196), Expect = e-105 Identities = 288/316 (91%), Gaps = 2/316 (0%) Strand = Plus / Minus Query: 86 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 145 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 13039 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 12980 Query: 146 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 204 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 12979 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 12920 Query: 205 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 263 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12919 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 12860 Query: 264 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 323 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 12859 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 12800 Query: 324 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 383 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 12799 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 12740 Query: 384 tgctgcacaaccaaag 399 |||||||||||||||| Sbjct: 12739 tgctgcacaaccaaag 12724 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggta 64 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 13102 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 13045 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 12633 accaattcaaaagatggttccttgaactc 12605
>gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN-B1 (VRN-B1) gene, complete cds Length = 6297 Score = 389 bits (196), Expect = e-105 Identities = 288/316 (91%), Gaps = 2/316 (0%) Strand = Plus / Minus Query: 86 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 145 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 6195 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 6136 Query: 146 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 204 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 6135 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 6076 Query: 205 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 263 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 6075 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 6016 Query: 264 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 323 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 6015 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 5956 Query: 324 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 383 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 5955 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 5896 Query: 384 tgctgcacaaccaaag 399 |||||||||||||||| Sbjct: 5895 tgctgcacaaccaaag 5880 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggta 64 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 6258 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 6201 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 5789 accaattcaaaagatggttccttgaactc 5761
>gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225D16 VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 389 bits (196), Expect = e-105 Identities = 288/316 (91%), Gaps = 2/316 (0%) Strand = Plus / Minus Query: 86 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 145 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 13039 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 12980 Query: 146 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 204 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 12979 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 12920 Query: 205 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 263 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12919 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 12860 Query: 264 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 323 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 12859 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 12800 Query: 324 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 383 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 12799 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 12740 Query: 384 tgctgcacaaccaaag 399 |||||||||||||||| Sbjct: 12739 tgctgcacaaccaaag 12724 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggta 64 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 13102 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 13045 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 12633 accaattcaaaagatggttccttgaactc 12605
>gb|AY280870.1| Triticum aestivum MADS-box protein TaVRT-1 mRNA, complete cds Length = 1210 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 86 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 145 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1077 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 1018 Query: 146 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 204 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 1017 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 958 Query: 205 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 263 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 957 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 898 Query: 264 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 323 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 897 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 838 Query: 324 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 383 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 837 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 778 Query: 384 tgctg 388 ||||| Sbjct: 777 tgctg 773 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggta 64 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 1140 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 1083
>dbj|AB007504.1| Triticum aestivum TaMADS#11 mRNA for MADS box transcription factor, complete cds Length = 1161 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 86 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 145 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 1002 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 943 Query: 146 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 204 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 942 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 883 Query: 205 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 263 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 882 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 823 Query: 264 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 323 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 822 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 763 Query: 324 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 383 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 762 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 703 Query: 384 tgctg 388 ||||| Sbjct: 702 tgctg 698 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 7 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggta 64 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 1065 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 1008
>gb|AY466446.1| Aegilops tauschii clone BAC 22J2 VRN-D1 gene, partial cds Length = 957 Score = 188 bits (95), Expect = 1e-44 Identities = 122/131 (93%) Strand = Plus / Minus Query: 277 tcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggacctgagg 336 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| || Sbjct: 957 tcagccgttgatgtggctcaccatccacagtggaagccccgtccggggtggggcctgcgg 898 Query: 337 ctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctgcacaacca 396 |||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 897 ctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaatgctgcacaacca 838 Query: 397 aagcgaacaca 407 ||| ||||||| Sbjct: 837 aagtgaacaca 827 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 744 accaattcaaaagatggttccttgaactc 716 Score = 42.1 bits (21), Expect = 2.1 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 498 agtattttgttactgaaatgtgtccaggacaggactgtatattca 542 |||||||||||||| ||||||| || |||||||||| ||||||| Sbjct: 818 agtattttgttacttaaatgtggcc-cgacaggactgcatattca 775
>gb|AY466448.1| Triticum turgidum subsp. durum clone BAC 1256C17 VRN-A1 gene, partial cds Length = 959 Score = 180 bits (91), Expect = 3e-42 Identities = 124/135 (91%) Strand = Plus / Minus Query: 281 ccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgc 340 |||||||||||||||||||||||| |||||||| |||||||| ||||| |||| |||||| Sbjct: 955 ccgttgatgtggctcaccatccacggtggaagccccgtccggggtggggcctgcggctgc 896 Query: 341 actgccacatcctctgccctctcgcctgccgccgctgggtgattgctgcacaaccaaagc 400 |||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||| Sbjct: 895 actgccgcatcctctgccctctcgcctgttgccgctggatgaatgctgcacaaccaaagc 836 Query: 401 gaacacatgcatatt 415 ||||||| ||||||| Sbjct: 835 gaacacaagcatatt 821 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||| ||| ||||| Sbjct: 748 accaattcaaaagatggttacttgaactc 720
>gb|AY466447.1| Triticum turgidum subsp. durum clone BAC 1225D16 VRN-B1 gene, partial cds Length = 965 Score = 157 bits (79), Expect = 5e-35 Identities = 112/123 (91%) Strand = Plus / Minus Query: 277 tcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggacctgagg 336 |||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||| || Sbjct: 965 tcagccgttgatgtggctaaccatccacagtggaagccccgtccggggtggggcctgcgg 906 Query: 337 ctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctgcacaacca 396 |||||||||| |||||||||||||||| |||| |||||||| ||| ||||||||||||| Sbjct: 905 ctgcactgccgcatcctctgccctctctcctgatgccgctggatgaatgctgcacaacca 846 Query: 397 aag 399 ||| Sbjct: 845 aag 843 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 567 accaattcaaaagatggttccttcaactc 595 ||||||||||||||||||||||| ||||| Sbjct: 752 accaattcaaaagatggttccttgaactc 724
>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons 1-3 Length = 2155 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||| | |||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1270 taatataaaagcatttagaacactactttagtaatctaaacgctcttatattagtttaca 1329 Query: 493 gatggagta 501 || |||||| Sbjct: 1330 gagggagta 1338
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| |||||| || |||||||||||||||||||| || |||||||| |||||| Sbjct: 34578 taatataagagcatttagaatactactttagtaatctaaacactcttatattagtttaca 34519 Query: 493 gatggagtatt 503 || |||||||| Sbjct: 34518 gagggagtatt 34508
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| |||||| ||||||||||||||||| ||||| || |||||||| |||||| Sbjct: 150208 taatataagagcatttagaacactactttagtaatttaaacactcttatattagtttaca 150267 Query: 493 gatggagta 501 || |||||| Sbjct: 150268 gagggagta 150276
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| | |||| | |||||||||||| ||||||||||| |||||||| |||||| Sbjct: 7551 taatataagagcgtttagatcactactttagtgatctaaacgctcttatattagtttaca 7610 Query: 493 gatggagtattt 504 || ||||||||| Sbjct: 7611 gagggagtattt 7622
>gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 precursor (TLP2) mRNA, complete cds Length = 975 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| |||| |||||||||||||| ||||||| |||||||||||| |||||| Sbjct: 708 taatataagagtgtttagaacactactttagtgatctaaatgcttttatattagtttaca 649 Query: 493 gatggagtatt 503 || |||||||| Sbjct: 648 gagggagtatt 638
>gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 precursor (TLP3) gene, complete cds Length = 1003 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| |||| |||||||||||||| ||||||| |||||||||||| |||||| Sbjct: 800 taatataagagtgtttagaacactactttagtgatctaaatgcttttatattagtttaca 741 Query: 493 gatggagtatt 503 || |||||||| Sbjct: 740 gagggagtatt 730
>gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 precursor (TLP1) mRNA, complete cds Length = 1151 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| |||| |||||||||||||| ||||||| |||||||||||| |||||| Sbjct: 698 taatataagagtgtttagaacactactttagtgatctaaatgcttttatattagtttaca 639 Query: 493 gatggagtatt 503 || |||||||| Sbjct: 638 gagggagtatt 628
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 434 aatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttacag 493 ||||||||| | |||| | |||||||||||| ||||||||||| ||||||| |||||||| Sbjct: 21720 aatataagagcgtttagatcactactttagtgatctaaacgctcttatatttatttacag 21661 Query: 494 atggagta 501 | |||||| Sbjct: 21660 agggagta 21653 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 461 tagtaatctaaacgcttttatattaatttacagatggagta 501 |||| ||||||||||| ||||||| |||||||| |||||| Sbjct: 21697 tagtgatctaaacgctcttatatttctttacagagggagta 21737
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds Length = 9024 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 461 tagtaatctaaacgcttttatattaatttacagatggagtat 502 |||||||||||||||| |||||||||||||| || ||||||| Sbjct: 2851 tagtaatctaaacgctcttatattaatttacggagggagtat 2810 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| | |||| | ||||||||||| ||||||||||| ||||| || |||||| Sbjct: 2827 taatataagagcgtttagattactactttagtgatctaaacgctcttatagtagtttaca 2886 Query: 493 gatggagta 501 || |||||| Sbjct: 2887 gacggagta 2895
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds Length = 7010 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 461 tagtaatctaaacgcttttatattaatttacagatggagtat 502 |||||||||||||||| |||||||||||||| || ||||||| Sbjct: 1607 tagtaatctaaacgctcttatattaatttacggagggagtat 1566 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| | |||| | ||||||||||| ||||||||||| ||||| || |||||| Sbjct: 1583 taatataagagcgtttagattactactttagtgatctaaacgctcttatagtagtttaca 1642 Query: 493 gatggagta 501 || |||||| Sbjct: 1643 gacggagta 1651
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 453 cactactttagtaatctaaacgcttttatattaatttacagatggagta 501 |||||||||||| ||||||||||| |||||||| ||||| || |||||| Sbjct: 6353 cactactttagtgatctaaacgctcttatattagtttacggagggagta 6401
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||| |||||||| | ||||| |||| | |||||| | || |||||||| |||||| Sbjct: 201056 taatataaaaacatttagatcactattttacttatctaagcactcttatattagtttaca 200997 Query: 493 gatggagta 501 ||||||||| Sbjct: 200996 gatggagta 200988 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| | |||| | |||||||||||| ||||||| | | |||||||| |||||| Sbjct: 29756 taatataagaccttttagatcactactttagtgatctaaaaggtcttatattagtttaca 29815 Query: 493 ga 494 || Sbjct: 29816 ga 29817
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6 Length = 4034 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| |||||| | ||||| |||||||||||||||| |||||||| ||||| Sbjct: 2779 taatataagagcatttagatcactaaaatagtaatctaaacgctcttatattagtttacg 2720 Query: 493 gatggagta 501 || |||||| Sbjct: 2719 gagggagta 2711
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 453 cactactttagtaatctaaacgcttttatattaatttacagatggagta 501 |||||||||||| ||||||| ||| |||||||| |||||||| |||||| Sbjct: 978 cactactttagtgatctaaaagctcttatattagtttacagagggagta 1026
>emb|CR626926.1| Aegilops tauschii Length = 94421 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 454 actactttagtaatctaaacgcttttatattaatttacagatggagta 501 |||||| |||| |||||||||||||||||||| |||||| | |||||| Sbjct: 85588 actactctagtgatctaaacgcttttatattattttacatagggagta 85541 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 461 tagtaatctaaacgcttttatattaatttacagatggagtatttt 505 |||| ||||||||||| | ||||| ||| ||||| |||||||||| Sbjct: 85588 tagtgatctaaacgctctcatatttattcacagagggagtatttt 85632
>gb|AY553258.1| Hordeum marinum isolate Hor_mar phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 839 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/70 (85%), Gaps = 2/70 (2%) Strand = Plus / Minus Query: 434 aatataagaacatttaaaacactactttagtaatc--taaacgcttttatattaatttac 491 |||||| || |||||| ||||||| |||||||||| ||||| ||||||||||| ||||| Sbjct: 558 aatatacgagcatttagaacactattttagtaatctataaacacttttatattagtttac 499 Query: 492 agatggagta 501 | | |||||| Sbjct: 498 aaagggagta 489
>gb|AY198326.1| Lolium perenne MADS1 mRNA, complete cds Length = 1284 Score = 54.0 bits (27), Expect = 5e-04 Identities = 86/104 (82%), Gaps = 5/104 (4%) Strand = Plus / Minus Query: 220 ggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctggaag--ccctt 277 |||||||||| || | ||| ||||||||||| |||| ||| |||| |||||| ||||| Sbjct: 960 ggccggtgcagctcgctacacgtactgaataatacgtttagatggagtggaaggcccctt 901 Query: 278 cagcc---gttgatgtggctcaccatccacagtggaagcgccgt 318 ||||| ||||||||| ||||||||||| |||||||| |||| Sbjct: 900 cagccattgttgatgtgactcaccatccatggtggaagcaccgt 857
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 1117 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| |||||| | |||||||| | | ||||||| |||||||||||| |||||| Sbjct: 598 taatataagagcatttagatcactacttaa-tgatctaaatgcttttatattagtttaca 540 Query: 493 ga 494 || Sbjct: 539 ga 538
>gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (rga2) gene, partial cds Length = 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 492 |||||||||| | |||| | |||||||||||| ||||||| | | |||||||| |||||| Sbjct: 260 taatataagaccttttagatcactactttagtgatctaaaaggtcttatattagtttaca 201 Query: 493 ga 494 || Sbjct: 200 ga 199
>gb|AY395715.1| Dendrocalamus latiflorus MADS-box protein (Mads2) mRNA, complete cds Length = 735 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 ||||||||||||||||||||||||| Sbjct: 733 agccgttgatgtggctcaccatcca 709 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 331 ctgaggctgcactgccacatcctctgccctctcgcctgccgccgc 375 |||||||||| |||| | ||||||||||||||||| || ||||| Sbjct: 687 ctgaggctgccctgctgcgtcctctgccctctcgccggctgccgc 643
>gb|AY395714.1| Dendrocalamus latiflorus MADS-box protein (Mads1) mRNA, complete cds Length = 735 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 ||||||||||||||||||||||||| Sbjct: 733 agccgttgatgtggctcaccatcca 709 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 331 ctgaggctgcactgccacatcctctgccctctcgcctgccgccgc 375 |||||||||| |||| | ||||||||||||||||| || ||||| Sbjct: 687 ctgaggctgccctgctgcgtcctctgccctctcgccggctgccgc 643
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494 Length = 2570 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 461 tagtaatctaaacgcttttatattaatttacagatggagta 501 |||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 1429 tagtgatctaaacgctcttatattagtttacagagggagta 1389
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 433 taatataagaacatttaaaacactactttagtaatctaaacgcttttatatta 485 |||||||| ||| |||| | || ||||||||| ||||||||||| |||||||| Sbjct: 1717 taatataaaaacgtttagatcattactttagttatctaaacgctcttatatta 1769
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Minus Query: 453 cactactttagtaatctaaacgcttttatattaatttacagatggagt 500 ||||| |||||| ||||||||||| |||||||| ||||| || ||||| Sbjct: 792 cactattttagtgatctaaacgctcttatattagtttactgagggagt 745
>gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds Length = 9585 Score = 48.1 bits (24), Expect = 0.033 Identities = 60/71 (84%), Gaps = 2/71 (2%) Strand = Plus / Plus Query: 433 taatataagaacatttaaaacactacttta--gtaatctaaacgcttttatattaattta 490 |||||||| | |||||| | |||||||||| ||||| ||||| || ||||||||||||| Sbjct: 9176 taatataaaagcatttagatcactactttatagtaatttaaacactcttatattaattta 9235 Query: 491 cagatggagta 501 | || |||||| Sbjct: 9236 cggagggagta 9246 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 461 tagtaatctaaacgcttttatattaatttac 491 |||| ||||||| |||||||||||||||||| Sbjct: 9200 tagtgatctaaatgcttttatattaatttac 9170
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Minus Query: 454 actactttagtaatctaaacgcttttatattaatttacagatggagta 501 |||||| |||| ||||||||||| |||||||| |||||| | |||||| Sbjct: 47993 actactctagtgatctaaacgctcttatattattttacatagggagta 47946 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 461 tagtaatctaaacgcttttatattaatttacagatggagtatttt 505 |||| ||||||||||| | ||||| ||| ||||| |||||||||| Sbjct: 47993 tagtgatctaaacgctctcatatttattcacagagggagtatttt 48037
>gb|AF035378.1|AF035378 Lolium temulentum MADS-box protein 1 (MADS1) mRNA, complete cds Length = 1207 Score = 46.1 bits (23), Expect = 0.13 Identities = 85/104 (81%), Gaps = 5/104 (4%) Strand = Plus / Minus Query: 220 ggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctggaag--ccctt 277 |||||||||| || | ||| ||||||||||| |||| ||| |||| |||||| ||||| Sbjct: 936 ggccggtgcagctcgctacacgtactgaataatacgtttagatggagtggaaggaccctt 877 Query: 278 cagcc---gttgatgtggctcaccatccacagtggaagcgccgt 318 ||||| ||||| ||| ||||||||||| |||||||| |||| Sbjct: 876 cagccattgttgaggtgactcaccatccatggtggaagcaccgt 833
>gb|AC119573.9| Mus musculus chromosome 15, clone RP23-75H23, complete sequence Length = 216297 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 431 aataatataagaacatttaaaa 452 |||||||||||||||||||||| Sbjct: 90084 aataatataagaacatttaaaa 90105
>gb|AC103358.7| Mus musculus chromosome 19, clone RP24-358I11, complete sequence Length = 117340 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 actctgatttcttttcctctcc 174 |||||||||||||||||||||| Sbjct: 26709 actctgatttcttttcctctcc 26730
>emb|AL161452.19| Human DNA sequence from clone RP11-426A6 on chromosome 9 Contains the OBP2A gene for odorant-binding protein 2A, the LCN1 gene for lipocalin 1, the MRPS2 gene for mitochondrial ribosomal protein S2, gene MGC29761, a novel gene, gene KIAA0649, a novel gene, a novel gene, a suppressor of cytokine signaling 5 (SOCS5) pseudogene and two CpG islands, complete sequence Length = 153231 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 ttttcctctcccctccatgggg 185 |||||||||||||||||||||| Sbjct: 51042 ttttcctctcccctccatgggg 51021
>gb|AC157907.2| Mus musculus chromosome 19, clone RP23-79H21, complete sequence Length = 153518 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 153 actctgatttcttttcctctcc 174 |||||||||||||||||||||| Sbjct: 56837 actctgatttcttttcctctcc 56816
>gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein (rga2) gene, partial cds Length = 1439 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Minus Query: 453 cactactttagtaatctaaacgcttttatattaatttacaga 494 |||||||||||| ||||||| | | |||||||| |||||||| Sbjct: 240 cactactttagtgatctaaaaggtcttatattagtttacaga 199
>gb|AY071207.2| Drosophila melanogaster RE25242 full insert cDNA Length = 880 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 442 aacatttaaaacactactttagtaat 467 ||||||||||||| |||||||||||| Sbjct: 733 aacatttaaaacattactttagtaat 758
>ref|NM_166238.2| Drosophila melanogaster CG4853-RA, transcript variant A (CG4853), mRNA Length = 2838 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 442 aacatttaaaacactactttagtaat 467 ||||||||||||| |||||||||||| Sbjct: 2788 aacatttaaaacattactttagtaat 2763
>ref|NM_137379.3| Drosophila melanogaster CG11419-RA (CG11419), mRNA Length = 1100 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 442 aacatttaaaacactactttagtaat 467 ||||||||||||| |||||||||||| Sbjct: 733 aacatttaaaacattactttagtaat 758
>ref|NM_137378.2| Drosophila melanogaster CG4853-RB, transcript variant B (CG4853), mRNA Length = 2956 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 442 aacatttaaaacactactttagtaat 467 ||||||||||||| |||||||||||| Sbjct: 2906 aacatttaaaacattactttagtaat 2881
>gb|AY060964.1| Drosophila melanogaster GM09415 full length cDNA Length = 2979 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 442 aacatttaaaacactactttagtaat 467 ||||||||||||| |||||||||||| Sbjct: 2906 aacatttaaaacattactttagtaat 2881
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 442 aacatttaaaacactactttagtaat 467 ||||||||||||| |||||||||||| Sbjct: 108883 aacatttaaaacattactttagtaat 108858
>gb|BT003211.1| Drosophila melanogaster SD26770 full insert cDNA Length = 2863 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 442 aacatttaaaacactactttagtaat 467 ||||||||||||| |||||||||||| Sbjct: 2789 aacatttaaaacattactttagtaat 2764
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 442 aacatttaaaacactactttagtaat 467 ||||||||||||| |||||||||||| Sbjct: 251900 aacatttaaaacattactttagtaat 251875
>gb|AC122883.5| Mus musculus BAC clone RP23-83N21 from chromosome 3, complete sequence Length = 230573 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 432 ataatataagaacatttaaaac 453 |||||||||||||||||||||| Sbjct: 93361 ataatataagaacatttaaaac 93340
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217496 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 tcttttcctctcccctccatg 182 ||||||||||||||||||||| Sbjct: 139234 tcttttcctctcccctccatg 139214
>ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 783 agccgttgatgtggctcagcatcca 759
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 64162 agccgttgatgtggctcagcatcca 64138
>gb|AC103371.9| Mus musculus chromosome 5, clone RP24-399A15, complete sequence Length = 122682 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 tattttgttactgaaatgtgt 520 ||||||||||||||||||||| Sbjct: 84148 tattttgttactgaaatgtgt 84168
>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds Length = 3448 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 461 tagtaatctaaacgcttttatatta 485 |||||||||||||||| |||||||| Sbjct: 1965 tagtaatctaaacgctcttatatta 1989
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 30739621 agccgttgatgtggctcagcatcca 30739645
>gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS211 mRNA, complete cds Length = 1109 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 861 agccgttgatgtggctcagcatcca 837
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 22769 agccgttgatgtggctcagcatcca 22745
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Minus Query: 434 aatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttacag 493 ||||||||| ||||| | ||||||||| || ||||||||||| |||||| ||||| | Sbjct: 11739 aatataagagtatttagatcactactttggtgatctaaacgctcatatatttctttacgg 11680 Query: 494 atggagtat 502 | ||||||| Sbjct: 11679 agggagtat 11671
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Minus Query: 434 aatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttacag 493 ||||||||| ||||| | ||||||||| || ||||||||||| |||||| ||||| | Sbjct: 14457 aatataagagtatttagatcactactttggtgatctaaacgctcatatatttctttacgg 14398 Query: 494 atggagtat 502 | ||||||| Sbjct: 14397 agggagtat 14389
>gb|AC113203.10| Mus musculus chromosome 5, clone RP23-276C23, complete sequence Length = 201674 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 tattttgttactgaaatgtgt 520 ||||||||||||||||||||| Sbjct: 21203 tattttgttactgaaatgtgt 21223
>emb|CR381602.30| Zebrafish DNA sequence from clone DKEY-183M22 in linkage group 6, complete sequence Length = 192136 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 gcacaaccaaagcgaacacat 408 ||||||||||||||||||||| Sbjct: 18879 gcacaaccaaagcgaacacat 18899
>emb|AL512663.4| Human DNA sequence from clone RP11-356H7 on chromosome 1, complete sequence Length = 75171 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 acatataaattacatggtaga 66 ||||||||||||||||||||| Sbjct: 24219 acatataaattacatggtaga 24199
>gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL10) mRNA, complete cds Length = 964 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 827 agccgttgatgtggctcagcatcca 803
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 48322 agccgttgatgtggctcagcatcca 48346
>gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1062 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 461 tagtaatctaaacgcttttatattaatttacagatggagta 501 |||| ||||||||||| ||||||| |||||||| |||||| Sbjct: 843 tagtgatctaaacgctcttatatttctttacagagggagta 883 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 atctaaacgcttttatattaatttacagatggagtat 502 ||||||||||| ||||||| |||||||| ||||||| Sbjct: 840 atctaaacgctcttatatttctttacagagggagtat 804
>gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217586 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 tcttttcctctcccctccatg 182 ||||||||||||||||||||| Sbjct: 164000 tcttttcctctcccctccatg 164020
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 30831045 agccgttgatgtggctcagcatcca 30831069
>gb|AF139664.2|AF139664 Oryza sativa FDRMADS6 mRNA, complete cds Length = 1101 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 754 agccgttgatgtggctcagcatcca 730
>gb|AC012485.13| Homo sapiens BAC clone RP11-5O24 from 2, complete sequence Length = 168738 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 ggacctgaggctgcactgcca 347 ||||||||||||||||||||| Sbjct: 55164 ggacctgaggctgcactgcca 55184
>gb|AC158207.2| Physcomitrella patens clone JGIASYB-1A8, complete sequence Length = 30281 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 ataatataagaacatttaaaa 452 ||||||||||||||||||||| Sbjct: 15843 ataatataagaacatttaaaa 15863
>gb|AF058697.1|AF058697 Oryza sativa MADS14 protein mRNA, complete cds Length = 1373 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 1026 agccgttgatgtggctcagcatcca 1002
>gb|AC153867.3| Mus musculus 6 BAC RP23-400K22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse6 BAC Library) complete sequence Length = 196838 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 tcttttcctctcccctccatg 182 ||||||||||||||||||||| Sbjct: 192924 tcttttcctctcccctccatg 192904
>emb|AL672218.9| Mouse DNA sequence from clone RP24-BM212H6 on chromosome 11, complete sequence Length = 196938 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 tattttgttactgaaatgtgt 520 ||||||||||||||||||||| Sbjct: 57337 tattttgttactgaaatgtgt 57357
>dbj|AB041020.1| Oryza sativa RAP1B mRNA for AP1-like MADS box protein, complete cds Length = 1124 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 agccgttgatgtggctcaccatcca 303 |||||||||||||||||| |||||| Sbjct: 744 agccgttgatgtggctcagcatcca 720
>ref|XM_638386.1| Dictyostelium discoideum hypothetical protein (DDB0217688), partial mRNA Length = 2460 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ataatataagaacatttaaa 451 |||||||||||||||||||| Sbjct: 1241 ataatataagaacatttaaa 1260
>ref|XM_635412.1| Dictyostelium discoideum TRRAP protein (DDB0229338), partial mRNA Length = 13530 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 aataatataagaacatttaaaaca 454 |||||||||| ||||||||||||| Sbjct: 3577 aataatataaaaacatttaaaaca 3600
>ref|XM_521057.1| PREDICTED: Pan troglodytes similar to L-type calcium channel alpha-1 subunit (LOC465629), mRNA Length = 3511 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 cactgccacatcctctgccctctc 363 ||||||| |||||||||||||||| Sbjct: 158 cactgccccatcctctgccctctc 181
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 459 tttagtaatctaaacgcttttatattaatttacaga 494 |||| ||||||||||| ||||||||| |||||||| Sbjct: 405625 tttaataatctaaacgtttttatatttctttacaga 405590
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 466 atctaaacgcttttatattaatttacagatggagta 501 ||||||| |||||||||||| |||||| | |||||| Sbjct: 103715 atctaaatgcttttatattagtttacaaagggagta 103750
>gb|AF196779.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 176767 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 cactgccacatcctctgccctctc 363 ||||||| |||||||||||||||| Sbjct: 172530 cactgccccatcctctgccctctc 172507
>gb|AF235097.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 140335 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 cactgccacatcctctgccctctc 363 ||||||| |||||||||||||||| Sbjct: 17800 cactgccccatcctctgccctctc 17777
>gb|AC149133.1| Pan troglodytes chromosome X clone RP43-010O16 map human ortholog p11.23 complete sequence Length = 179327 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 cactgccacatcctctgccctctc 363 ||||||| |||||||||||||||| Sbjct: 145722 cactgccccatcctctgccctctc 145699
>gb|AC183300.4| Pan troglodytes BAC clone CH251-263P14 from chromosome 4, complete sequence Length = 171121 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 159854 tttcttttcctctcccctcc 159873 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 49290 tttcttttcctctcccctcc 49309
>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence Length = 216041 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 81520 tttcttttcctctcccctcc 81501
>gb|AC108167.3| Homo sapiens BAC clone RP11-792M22 from 7, complete sequence Length = 10720 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 aaaacactactttagtaatctaaa 472 ||||||||||||||||| |||||| Sbjct: 8371 aaaacactactttagtattctaaa 8394
>gb|AC117118.4| Rattus norvegicus 1 BAC CH230-161O8 (Children's Hospital Oakland Research Institute) complete sequence Length = 216036 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tcatgctacatataaattac 58 |||||||||||||||||||| Sbjct: 160116 tcatgctacatataaattac 160097
>gb|AC125109.3| Mus musculus BAC clone RP24-232H5 from chromosome 3, complete sequence Length = 165361 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tcttttcctctcccctccat 181 |||||||||||||||||||| Sbjct: 142292 tcttttcctctcccctccat 142273
>gb|AC125074.3| Mus musculus BAC clone RP23-464N18 from chromosome 14, complete sequence Length = 181200 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 115317 tttcttttcctctcccctcc 115298
>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence Length = 180155 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 ggagtattttgttactgaaa 515 |||||||||||||||||||| Sbjct: 166365 ggagtattttgttactgaaa 166384
>ref|XM_647566.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (110.t00004) partial mRNA Length = 1665 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gaaataatataagaacattt 448 |||||||||||||||||||| Sbjct: 668 gaaataatataagaacattt 687
>ref|NM_001030490.1| Xenopus tropicalis bin3 protein (bin3), mRNA Length = 3800 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tttatattaatttacagatggagt 500 |||||||||||||| ||||||||| Sbjct: 836 tttatattaatttaaagatggagt 813
>gb|BC092368.1| Xenopus tropicalis bin3 protein, mRNA (cDNA clone MGC:108120 IMAGE:7005373), complete cds Length = 3800 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tttatattaatttacagatggagt 500 |||||||||||||| ||||||||| Sbjct: 836 tttatattaatttaaagatggagt 813
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gatttcttttcctctcccct 177 |||||||||||||||||||| Sbjct: 4111566 gatttcttttcctctcccct 4111547
>emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on chromosome 1 Contains the GJA5 gene for gap junction protein, alpha 5, 40kDa (connexin 40) protein, complete sequence Length = 114412 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ggaaaggaaactgaggtgga 114 |||||||||||||||||||| Sbjct: 43104 ggaaaggaaactgaggtgga 43085
>emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chromosome 13 Contains a cytochrome c oxidase subunit IV pseudogene, a novel gene, an aldo-keto reductase family 1, member B10 (aldose reductase) (AKR1B10) pseudogene, a novel gene, similar to RIKEN cDNA 1700086N05 and CpG island, complete sequence Length = 112107 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tctgatttcttttcctctcc 174 |||||||||||||||||||| Sbjct: 46525 tctgatttcttttcctctcc 46544
>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase Length = 5574 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 434 aatataagaacatttaaaacactactttagtaatctaaac 473 ||||||||| |||||| | ||||||||||| |||||||| Sbjct: 2276 aatataagatcatttagataactactttagtgatctaaac 2315
>emb|AJ006216.1|HSA6216 Homo sapiens CACNA1F gene, exons 1 to 48 Length = 31501 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 cactgccacatcctctgccctctc 363 ||||||| |||||||||||||||| Sbjct: 25264 cactgccccatcctctgccctctc 25287
>emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on chromosome 11 Contains the 5' end of a novel gene, a novel gene (4933430M04Rik) and a pseudogene similar to part of DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5), complete sequence Length = 181503 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ctactttactctgatttctt 165 |||||||||||||||||||| Sbjct: 84876 ctactttactctgatttctt 84895
>gb|AC015813.12| Homo sapiens, clone RP11-159D12, complete sequence Length = 181494 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 aggtggaaaggaaactgagg 110 |||||||||||||||||||| Sbjct: 131358 aggtggaaaggaaactgagg 131377
>gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome 14, complete sequence Length = 210912 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 58360 tttcttttcctctcccctcc 58379
>gb|AC182643.2| Pan troglodytes BAC clone CH251-219K6 from chromosome 4, complete sequence Length = 176400 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 102601 tttcttttcctctcccctcc 102582
>gb|AC093890.3| Homo sapiens BAC clone RP11-673E1 from 4, complete sequence Length = 171358 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 68545 tttcttttcctctcccctcc 68526
>gb|AC104090.3| Homo sapiens BAC clone RP11-780M14 from 4, complete sequence Length = 101033 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 94746 tttcttttcctctcccctcc 94727
>gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosome y, complete sequence Length = 174066 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 catataaattacatggtagattac 70 |||||||| ||||||||||||||| Sbjct: 100712 catataaaatacatggtagattac 100735
>gb|AC048387.16| Homo sapiens chromosome 8, clone RP11-465K16, complete sequence Length = 193896 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ttcttttcctctcccctcca 180 |||||||||||||||||||| Sbjct: 95990 ttcttttcctctcccctcca 95971
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tacagatggagtattttgtt 508 |||||||||||||||||||| Sbjct: 11098362 tacagatggagtattttgtt 11098381
>gb|AC073062.7| Homo sapiens BAC clone RP11-132H1 from 2, complete sequence Length = 135822 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 gaaataatataagaacattt 448 |||||||||||||||||||| Sbjct: 63889 gaaataatataagaacattt 63870
>gb|AC004757.2| Homo sapiens chromosome 17, clone CTB-117K16, complete sequence Length = 107156 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 aggtggaaaggaaactgagg 110 |||||||||||||||||||| Sbjct: 82688 aggtggaaaggaaactgagg 82669
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 469 taaacgcttttatattaatttacagatggagtattt 504 |||||||| ||||||||||||| ||| | ||||||| Sbjct: 73089 taaacgctcttatattaatttatagaggaagtattt 73124
>gb|AF512031.3| Choristoneura fumiferana MNPV polyhedrin, complete genome Length = 129593 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 aaacgcttttatattaattt 489 |||||||||||||||||||| Sbjct: 26278 aaacgcttttatattaattt 26259
>emb|X03739.1|XLTF3A9 Xenopus laevis TFIIIA gene for transcription factor TFIIIA (exon 9) Length = 631 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 aataatataagaacatttaa 450 |||||||||||||||||||| Sbjct: 215 aataatataagaacatttaa 234
>gb|AC079446.30| Mus musculus strain C57BL/6J chromosome X clone rp23-9p22, complete sequence Length = 223309 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tattttgttactgaaatgtg 519 |||||||||||||||||||| Sbjct: 162773 tattttgttactgaaatgtg 162792
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tacagatggagtattttgtt 508 |||||||||||||||||||| Sbjct: 11098061 tacagatggagtattttgtt 11098080
>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157771 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tacagatggagtattttgtt 508 |||||||||||||||||||| Sbjct: 87813 tacagatggagtattttgtt 87794
>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134082 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tacagatggagtattttgtt 508 |||||||||||||||||||| Sbjct: 7213 tacagatggagtattttgtt 7194
>emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on chromosome X, complete sequence Length = 187999 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tattttgttactgaaatgtg 519 |||||||||||||||||||| Sbjct: 37058 tattttgttactgaaatgtg 37077
>gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, complete sequence Length = 170634 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 122835 tttcttttcctctcccctcc 122854
>gb|U93305.1|HSU93305 Homo sapiens A4 differentiation-dependent protein (A4), triple LIM domain protein (LMO6), and synaptophysin (SYP) genes, complete cds; and calcium channel alpha-1 subunit (CACNA1F) gene, partial cds Length = 44147 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 cactgccacatcctctgccctctc 363 ||||||| |||||||||||||||| Sbjct: 39909 cactgccccatcctctgccctctc 39886
>emb|AL691416.9| Mouse DNA sequence from clone RP23-110I8 on chromosome 2, complete sequence Length = 208363 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gaaataatataagaacatttaaaa 452 ||||||||||||| |||||||||| Sbjct: 108601 gaaataatataagcacatttaaaa 108624
>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete sequence Length = 226637 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tttcttttcctctcccctcc 179 |||||||||||||||||||| Sbjct: 93924 tttcttttcctctcccctcc 93943
>gb|AC162280.4| Mus musculus chromosome 3, clone RP24-240C19, complete sequence Length = 165299 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 ggagtattttgttactgaaa 515 |||||||||||||||||||| Sbjct: 58592 ggagtattttgttactgaaa 58611 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,795,729 Number of Sequences: 3902068 Number of extensions: 6795729 Number of successful extensions: 141048 Number of sequences better than 10.0: 175 Number of HSP's better than 10.0 without gapping: 174 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 140502 Number of HSP's gapped (non-prelim): 513 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
