>SYMM_XENLA (Q7T0Z0) Methionyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.10) (Methionine--tRNA ligase 2) (Mitochondrial
           methionine--tRNA ligase) (MtMetRS)
          Length = 562

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -3

Query: 252 EPVRPAHSFRFCHHWCQRTTPHL--*RSRAQKAW 157
           EPV PA   +  HHW +   P L   R R++ +W
Sbjct: 217 EPVHPAPFLKLVHHWLEEELPDLSVSRQRSRLSW 250

>SYD_SYNEL (Q8DJS8) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 605

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 31  RISKGGDMYRM*DNANGKGIVYYRPRNTTHAPTQASSSPSVIP 159
           RI  GGD+++    A  KG+ Y R RN     T  +   ++ P
Sbjct: 341 RIKPGGDLFQEATTAGAKGLAYIRVRNNGEIDTIGAIKDNLSP 383

>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2|
          Length = 924

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 112 TTHAPTQASSSPSVIPSFLGTRPSQVWCSSLAPMMTEP 225
           TT AP Q   S +V+P   G  PS      LAP   +P
Sbjct: 96  TTAAPVQVDHSAAVVPIVAGEGPSTAHREELAPPAGQP 133

>PHF1_MOUSE (Q9Z1B8) PHD finger protein 1 (PHF1 protein) (T-complex|
           testis-expressed 3) (Polycomblike 1) (mPCl1)
          Length = 559

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 103 PRNTTHAPTQASSS-PSVIPSFLGTRPSQVWCSSLAP 210
           P+++ H+ T +SSS P++ P F    P    C SL+P
Sbjct: 479 PKSSPHSVTASSSSVPALTPGFSRHSPPSPLCRSLSP 515

>SYD_ANAVT (Q3MGL3) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 614

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 31  RISKGGDMYRM*DNANGKGIVYYRPR 108
           RI  GGD++R    A  KG+ Y R R
Sbjct: 360 RIKPGGDLFREASEAGAKGLAYIRVR 385

>UROL1_MOUSE (Q5DID3) Uromodulin-like 1 precursor (Olfactorin)|
          Length = 1319

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
 Frame = +1

Query: 25  PPRISKGGDMYRM*DNANGKGIVYYRPRNTTHAPTQASSSPSVI----PSFL--GTRPSQ 186
           PP +  GG + R   N+ G+G  +   + TT AP   +     +    P FL   T    
Sbjct: 602 PPSVRDGGSIVRQDRNSTGQGQTHGTHQGTTDAPLHTTRESQELITKDPPFLTATTTGYV 661

Query: 187 VWCSS 201
           VW SS
Sbjct: 662 VWHSS 666

>SYD_ANASP (Q8YUB6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 595

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 31  RISKGGDMYRM*DNANGKGIVYYRPR 108
           RI  GGD++R    A  KG+ Y R R
Sbjct: 341 RIKPGGDLFREASEAGAKGLAYIRVR 366

>SYD_SYNY3 (P73851) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 599

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 31  RISKGGDMYRM*DNANGKGIVYYRPRNTTHAPT 129
           RI  GGD+++    A  KGI Y R R+     T
Sbjct: 341 RIKPGGDLFKEATEAGAKGIAYIRVRDNGEIDT 373


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,832,404
Number of Sequences: 219361
Number of extensions: 834584
Number of successful extensions: 2199
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2194
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)