| Clone Name | rbaal26k09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL022397.1|HS11C7 Human DNA sequence from clone CTA-11C7 on chromosome 1q32.1-32.3 Contains part of the SYT14 gene for synaptotagmin XIV, complete sequence Length = 109302 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 541 attaacaaaaccataatgtttcctt 565 ||||||||||||| ||||||||||| Sbjct: 27937 attaacaaaaccaaaatgtttcctt 27961
>ref|XM_632583.1| Dictyostelium discoideum hypothetical protein (DDB0218841), partial mRNA Length = 13779 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gaattaatttttcaccatgt 495 |||||||||||||||||||| Sbjct: 11266 gaattaatttttcaccatgt 11247
>emb|CT010522.7| Mouse DNA sequence from clone RP23-310H3 on chromosome 16, complete sequence Length = 169798 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gcaatctttcataccccaat 330 |||||||||||||||||||| Sbjct: 4846 gcaatctttcataccccaat 4827
>gb|AC111103.7| Mus musculus chromosome 16, clone RP23-187G7, complete sequence Length = 222348 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 gcaatctttcataccccaat 330 |||||||||||||||||||| Sbjct: 111964 gcaatctttcataccccaat 111983
>gb|AC148562.3| Callicebus moloch clone LB5-363C5, complete sequence Length = 217859 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 caagatggcatgtggagtac 141 |||||||||||||||||||| Sbjct: 108942 caagatggcatgtggagtac 108923
>emb|BX927365.7| Zebrafish DNA sequence from clone DKEY-161P7 in linkage group 23, complete sequence Length = 229608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tacaaatttgaagtacaaga 120 |||||||||||||||||||| Sbjct: 165307 tacaaatttgaagtacaaga 165326
>emb|BX571661.1| Wolinella succinogenes, complete genome; segment 5/7 Length = 346613 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 catgtggagtacatcaaaaa 149 |||||||||||||||||||| Sbjct: 237086 catgtggagtacatcaaaaa 237105
>emb|AL645808.13| Mouse DNA sequence from clone RP23-427P14 on chromosome 13 Contains the gene for a novel protein similar to myosin, light polypeptide kinase 2 Mylk2, a novel gene, the Wrnip gene for Werner syndrome homolog (human) interacting protein, the Serpinb1a gene for serine (or cysteine) proteinase inhibitor clade B (ovalbumin) member 1a, a Serpinb1 pseudogene and a CpG island, complete sequence Length = 190673 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gcatgtgtggcagaagggag 442 |||||||||||||||||||| Sbjct: 76758 gcatgtgtggcagaagggag 76739
>gb|AC112219.2| Homo sapiens chromosome 3 clone RP11-433A10, complete sequence Length = 155472 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 acacaaatccttgatacaaa 87 |||||||||||||||||||| Sbjct: 139909 acacaaatccttgatacaaa 139890
>gb|AC091155.5| Homo sapiens chromosome 17, clone CTD1-2306D4, complete sequence Length = 144430 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 caagatggcatgtggagtac 141 |||||||||||||||||||| Sbjct: 135005 caagatggcatgtggagtac 134986
>gb|AC108131.2| Homo sapiens chromosome 16 clone RP11-337N9, complete sequence Length = 151941 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 atttttcaccatgtactcat 501 |||||||||||||||||||| Sbjct: 86374 atttttcaccatgtactcat 86393
>gb|AC022905.7| Homo sapiens chromosome 8, clone RP11-656G20, complete sequence Length = 184311 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 atgtactcatgtgcatgatcatat 515 |||||||||||||||||| ||||| Sbjct: 170436 atgtactcatgtgcatgagcatat 170459
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 tttgaagtacaagaccaaga 126 |||||||||||||||||||| Sbjct: 1481590 tttgaagtacaagaccaaga 1481609
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 tatattaacaaaaccataat 557 |||||||||||||||||||| Sbjct: 7763204 tatattaacaaaaccataat 7763185
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 atatgcaacagaattaattt 485 |||||||||||||||||||| Sbjct: 34647379 atatgcaacagaattaattt 34647398
>gb|AC135776.3| Homo sapiens chromosome 16 clone CTD-2144E22, complete sequence Length = 168546 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 atttttcaccatgtactcat 501 |||||||||||||||||||| Sbjct: 4510 atttttcaccatgtactcat 4529
>gb|AC011003.7|AC011003 Homo sapiens chromosome 8 clone RP11-86O15, complete sequence Length = 189042 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 atgtactcatgtgcatgatcatat 515 |||||||||||||||||| ||||| Sbjct: 66227 atgtactcatgtgcatgagcatat 66250
>gb|AC108868.4| Homo sapiens BAC clone RP11-448J14 from 2, complete sequence Length = 109290 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aaattacaaatttgaagtac 116 |||||||||||||||||||| Sbjct: 106440 aaattacaaatttgaagtac 106421
>gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence Length = 266544 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gaattaatttttcaccatgt 495 |||||||||||||||||||| Sbjct: 134471 gaattaatttttcaccatgt 134452
>gb|AC009837.13| Homo sapiens chromosome 17, clone RP11-550K23, complete sequence Length = 168509 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 caagatggcatgtggagtac 141 |||||||||||||||||||| Sbjct: 71205 caagatggcatgtggagtac 71224
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 atatgcaacagaattaattt 485 |||||||||||||||||||| Sbjct: 4330 atatgcaacagaattaattt 4349
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 tatattaacaaaaccataat 557 |||||||||||||||||||| Sbjct: 75702 tatattaacaaaaccataat 75683
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 atatgcaacagaattaattt 485 |||||||||||||||||||| Sbjct: 113994 atatgcaacagaattaattt 114013
>dbj|AP001306.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MKA23 Length = 70100 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aaggtcatgtcttttcgaga 392 |||||||||||||||||||| Sbjct: 44083 aaggtcatgtcttttcgaga 44102
>emb|AJ238716.1|RFL238716 Ruminococcus flavefaciens cesA gene Length = 2952 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaatgcccttgtgcatacca 43 |||||||||||||||||||| Sbjct: 1601 aaatgcccttgtgcatacca 1582
>emb|BX784029.5| Zebrafish DNA sequence from clone DKEY-21H14 in linkage group 4, complete sequence Length = 219903 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 aaaccataatgtttccttca 567 |||||||||||||||||||| Sbjct: 177962 aaaccataatgtttccttca 177981
>gb|BC084082.1| Xenopus laevis hypothetical LOC494997, mRNA (cDNA clone MGC:82159 IMAGE:7012549), complete cds Length = 2350 Score = 40.1 bits (20), Expect = 7.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 1 tttttctgggattttattccntaaaat 27 |||||||||||||||||| | |||||| Sbjct: 2333 tttttctgggattttatttcttaaaat 2307
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 caagatggcatgtggagtac 141 |||||||||||||||||||| Sbjct: 308282 caagatggcatgtggagtac 308263
>emb|AJ246275.1|UCO246275 unclassified coccolithophorid CCMP 300 18S rRNA gene Length = 1802 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aagtacaagaccaagatggc 130 |||||||||||||||||||| Sbjct: 510 aagtacaagaccaagatggc 491
>emb|AJ246263.1|PCA246263 Pleurochrysis carterae 18S rRNA gene, strain von Stosch Length = 1808 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aagtacaagaccaagatggc 130 |||||||||||||||||||| Sbjct: 511 aagtacaagaccaagatggc 492
>emb|AJ005180.1|LEAJ5180 Lycopersicon esculentum genomic RAPD band 26 Length = 2134 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 caaattacaaatttgaagtacaag 119 |||||||||||| ||||||||||| Sbjct: 429 caaattacaaatatgaagtacaag 406 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,763,258 Number of Sequences: 3902068 Number of extensions: 5763258 Number of successful extensions: 97282 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97122 Number of HSP's gapped (non-prelim): 160 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)