ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7k22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 172 8e-40
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
3dbj|AK101398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 8e-40
4dbj|AK060226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 8e-40
5ref|XM_472737.1| Oryza sativa (japonica cultivar-group), predic... 170 3e-39
6gb|BT017133.1| Zea mays clone EL01N0365G06.c mRNA sequence 90 1e-14
7gb|AY109528.1| Zea mays CL35118_-1 mRNA sequence 90 1e-14
8ref|XM_466391.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
10dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
11dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
12dbj|AK105763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
13ref|XM_363406.1| Magnaporthe grisea 70-15 hypothetical protein (... 46 0.13
14gb|AC163610.4| Mus musculus BAC clone RP23-59P17 from chromosome... 40 7.9
15gb|AC153158.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 7.9
16gb|AE008424.1| Streptococcus pneumoniae R6 section 40 of 184 of ... 40 7.9
17gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 7.9
18gb|BC081840.1| Rattus norvegicus guanylate cyclase 1, soluble, b... 40 7.9
19gb|AC146448.4| Pan troglodytes BAC clone RP43-5H14 from 7, compl... 40 7.9
20gb|AC127695.3| Mus musculus BAC clone RP23-310B17 from 17, compl... 40 7.9
21gb|AC142322.1| Pan troglodytes BAC clone RP43-66C5 from 7, compl... 40 7.9
22ref|XM_780536.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.9
23emb|Z14133.1|DMCHC D.melanogaster Chc mRNA for clathrin heavy chain 40 7.9
24gb|AY119615.1| Drosophila melanogaster LD43101 full insert cDNA 40 7.9
25ref|NM_206729.1| Drosophila melanogaster Clathrin heavy chain CG... 40 7.9
26ref|NM_206728.1| Drosophila melanogaster Clathrin heavy chain CG... 40 7.9
27ref|NM_167466.1| Drosophila melanogaster Clathrin heavy chain CG... 40 7.9
28ref|NM_057694.2| Drosophila melanogaster Clathrin heavy chain CG... 40 7.9
29ref|NM_012769.2| Rattus norvegicus guanylate cyclase 1, soluble,... 40 7.9
30gb|AC090943.3| Homo sapiens chromosome 3 clone RP11-22O15 map 3p... 40 7.9
31gb|AC092401.1|AC092401 Drosophila melanogaster, chromosome X, re... 40 7.9
32gb|AC013431.9|AC013431 Drosophila melanogaster, chromosome X, re... 40 7.9
33dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
34gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) ch... 40 7.9
35gb|DQ023143.1| Scleropages formosus mitochondrion, complete genome 40 7.9
36gb|AC091291.2| Homo sapiens chromosome 3 clone RP11-654A18 map 3... 40 7.9
37gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 40 7.9
38gb|AC009178.4|AC009178 Homo sapiens clone RP11-169C22 from 7q31,... 40 7.9
39gb|AC007790.1|AC007790 Homo sapiens clone RP11-283D18 from 7q31,... 40 7.9
40gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 ... 40 7.9
41gb|AC113315.8| Mus musculus chromosome 3, clone RP23-441B22, com... 40 7.9
42dbj|AB099521.2| Rattus norvegicus mRNA for soluble guanylyl cycl... 40 7.9
43dbj|AB099520.1| Rattus norvegicus mRNA for soluble guanylyl cycl... 40 7.9
44dbj|AB098707.1| Rattus norvegicus mRNA for soluble guanylyl cycl... 40 7.9
45dbj|AB098025.1| Rattus norvegicus mRNA for soluble guanylyl cycl... 40 7.9
46ref|NM_001018034.1| Canis familiaris guanylate cyclase 1, solubl... 40 7.9
47gb|DQ008576.1| Canis familiaris soluble guanylate cyclase 1 beta... 40 7.9
48gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
49emb|AL935265.4| Zebrafish DNA sequence from clone DKEY-66M24, co... 40 7.9
50gb|M22562.1|RATGCS Rat soluble guanylate cyclase 70kd subunit mR... 40 7.9 
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
             complete sequence
          Length = 138969

 Score =  172 bits (87), Expect = 8e-40
 Identities = 194/229 (84%), Gaps = 3/229 (1%)
 Strand = Plus / Minus

                                                                         
Query: 232   ttcagagcttatctatattgacgttcctgaagctgccaccgaggagtgacagtaggccgc 291
             ||||||||||||| || | | ||||||||||||||||||||||||||||||  |||||||
Sbjct: 75939 ttcagagcttatccatgtcggcgttcctgaagctgccaccgaggagtgacaagaggccgc 75880

                                                                         
Query: 292   caccatgcacccttccctcaggaacagcacagcctgcttctttgcccccacgtacggtag 351
             |||| |||||||||||||| ||||| ||||||||| | ||| |||||||| | |||||||
Sbjct: 75879 caccgtgcacccttccctccggaacggcacagcctccctctctgcccccatgcacggtag 75820

                                                                         
Query: 352   gctccgatgatgacgagggcatcatggagcgaggcacaagcagctgaggaggtatcatc- 410
             | || || || || ||||||||||| ||||||||||| |||| ||| |||||||||||| 
Sbjct: 75819 gttcggacgacgatgagggcatcatagagcgaggcaccagcacctggggaggtatcatca 75760

                                                              
Query: 411   --gattggctcctcactgtgccatcactatctgatgcggtgctgatgcc 457
               |  ||||||||||| ||||| || |  || || ||||||||||||||
Sbjct: 75759 tcgcctggctcctcaccgtgccgtcgcagtccgacgcggtgctgatgcc 75711
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  172 bits (87), Expect = 8e-40
 Identities = 194/229 (84%), Gaps = 3/229 (1%)
 Strand = Plus / Minus

                                                                            
Query: 232      ttcagagcttatctatattgacgttcctgaagctgccaccgaggagtgacagtaggccgc 291
                ||||||||||||| || | | ||||||||||||||||||||||||||||||  |||||||
Sbjct: 22867164 ttcagagcttatccatgtcggcgttcctgaagctgccaccgaggagtgacaagaggccgc 22867105

                                                                            
Query: 292      caccatgcacccttccctcaggaacagcacagcctgcttctttgcccccacgtacggtag 351
                |||| |||||||||||||| ||||| ||||||||| | ||| |||||||| | |||||||
Sbjct: 22867104 caccgtgcacccttccctccggaacggcacagcctccctctctgcccccatgcacggtag 22867045

                                                                            
Query: 352      gctccgatgatgacgagggcatcatggagcgaggcacaagcagctgaggaggtatcatc- 410
                | || || || || ||||||||||| ||||||||||| |||| ||| |||||||||||| 
Sbjct: 22867044 gttcggacgacgatgagggcatcatagagcgaggcaccagcacctggggaggtatcatca 22866985

                                                                 
Query: 411      --gattggctcctcactgtgccatcactatctgatgcggtgctgatgcc 457
                  |  ||||||||||| ||||| || |  || || ||||||||||||||
Sbjct: 22866984 tcgcctggctcctcaccgtgccgtcgcagtccgacgcggtgctgatgcc 22866936
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>dbj|AK101398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037C08, full
            insert sequence
          Length = 2644

 Score =  172 bits (87), Expect = 8e-40
 Identities = 194/229 (84%), Gaps = 3/229 (1%)
 Strand = Plus / Minus

                                                                        
Query: 232  ttcagagcttatctatattgacgttcctgaagctgccaccgaggagtgacagtaggccgc 291
            ||||||||||||| || | | ||||||||||||||||||||||||||||||  |||||||
Sbjct: 2414 ttcagagcttatccatgtcggcgttcctgaagctgccaccgaggagtgacaagaggccgc 2355

                                                                        
Query: 292  caccatgcacccttccctcaggaacagcacagcctgcttctttgcccccacgtacggtag 351
            |||| |||||||||||||| ||||| ||||||||| | ||| |||||||| | |||||||
Sbjct: 2354 caccgtgcacccttccctccggaacggcacagcctccctctctgcccccatgcacggtag 2295

                                                                        
Query: 352  gctccgatgatgacgagggcatcatggagcgaggcacaagcagctgaggaggtatcatc- 410
            | || || || || ||||||||||| ||||||||||| |||| ||| |||||||||||| 
Sbjct: 2294 gttcggacgacgatgagggcatcatagagcgaggcaccagcacctggggaggtatcatca 2235

                                                             
Query: 411  --gattggctcctcactgtgccatcactatctgatgcggtgctgatgcc 457
              |  ||||||||||| ||||| || |  || || ||||||||||||||
Sbjct: 2234 tcgcctggctcctcaccgtgccgtcgcagtccgacgcggtgctgatgcc 2186
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>dbj|AK060226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-G08, full
            insert sequence
          Length = 1722

 Score =  172 bits (87), Expect = 8e-40
 Identities = 194/229 (84%), Gaps = 3/229 (1%)
 Strand = Plus / Minus

                                                                        
Query: 232  ttcagagcttatctatattgacgttcctgaagctgccaccgaggagtgacagtaggccgc 291
            ||||||||||||| || | | ||||||||||||||||||||||||||||||  |||||||
Sbjct: 1492 ttcagagcttatccatgtcggcgttcctgaagctgccaccgaggagtgacaagaggccgc 1433

                                                                        
Query: 292  caccatgcacccttccctcaggaacagcacagcctgcttctttgcccccacgtacggtag 351
            |||| |||||||||||||| ||||| ||||||||| | ||| |||||||| | |||||||
Sbjct: 1432 caccgtgcacccttccctccggaacggcacagcctccctctctgcccccatgcacggtag 1373

                                                                        
Query: 352  gctccgatgatgacgagggcatcatggagcgaggcacaagcagctgaggaggtatcatc- 410
            | || || || || ||||||||||| ||||||||||| |||| ||| |||||||||||| 
Sbjct: 1372 gttcggacgacgatgagggcatcatagagcgaggcaccagcacctggggaggtatcatca 1313

                                                             
Query: 411  --gattggctcctcactgtgccatcactatctgatgcggtgctgatgcc 457
              |  ||||||||||| ||||| || |  || || ||||||||||||||
Sbjct: 1312 tcgcctggctcctcaccgtgccgtcgcagtccgacgcggtgctgatgcc 1264
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>ref|XM_472737.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2172

 Score =  170 bits (86), Expect = 3e-39
 Identities = 193/228 (84%), Gaps = 3/228 (1%)
 Strand = Plus / Minus

                                                                        
Query: 233  tcagagcttatctatattgacgttcctgaagctgccaccgaggagtgacagtaggccgcc 292
            |||||||||||| || | | ||||||||||||||||||||||||||||||  ||||||||
Sbjct: 2172 tcagagcttatccatgtcggcgttcctgaagctgccaccgaggagtgacaagaggccgcc 2113

                                                                        
Query: 293  accatgcacccttccctcaggaacagcacagcctgcttctttgcccccacgtacggtagg 352
            ||| |||||||||||||| ||||| ||||||||| | ||| |||||||| | ||||||||
Sbjct: 2112 accgtgcacccttccctccggaacggcacagcctccctctctgcccccatgcacggtagg 2053

                                                                        
Query: 353  ctccgatgatgacgagggcatcatggagcgaggcacaagcagctgaggaggtatcatc-- 410
             || || || || ||||||||||| ||||||||||| |||| ||| ||||||||||||  
Sbjct: 2052 ttcggacgacgatgagggcatcatagagcgaggcaccagcacctggggaggtatcatcat 1993

                                                            
Query: 411  -gattggctcctcactgtgccatcactatctgatgcggtgctgatgcc 457
             |  ||||||||||| ||||| || |  || || ||||||||||||||
Sbjct: 1992 cgcctggctcctcaccgtgccgtcgcagtccgacgcggtgctgatgcc 1945
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>gb|BT017133.1| Zea mays clone EL01N0365G06.c mRNA sequence
          Length = 904

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 153/189 (80%)
 Strand = Plus / Plus

                                                                       
Query: 369 ggcatcatggagcgaggcacaagcagctgaggaggtatcatcgattggctcctcactgtg 428
           |||||||| |||||||| || |||| ||| ||||| ||||| |||||||||||||| |||
Sbjct: 389 ggcatcatagagcgaggaaccagcacctgtggaggaatcattgattggctcctcacagtg 448

                                                                       
Query: 429 ccatcactatctgatgcggtgctgatgcctgatgaggaatgctcattggtcatgctactt 488
           || || |  || || ||||||||||  || || || || ||||| || |||||||| |||
Sbjct: 449 ccgtcgcagtcggaagcggtgctgacaccagaggacgagtgctcgttcgtcatgctgctt 508

                                                                       
Query: 489 gcagcggtagttgatgatgccacaatgccactgaagaggcctggtccgatcatgctccct 548
           || ||||| |  |||||  | |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 509 gctgcggtggcagatgacacaacaatgccgctgaagagacctggtccaatcatgcttcct 568

                    
Query: 549 ccactcttc 557
            || |||||
Sbjct: 569 acattcttc 577



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 253 cgttcctgaagctgccaccgaggagtgacagtaggccgccaccatgcacccttccctcag 312
           |||||||||||||||||||||  |||||||| ||||| |||||||| ||||| ||||| |
Sbjct: 276 cgttcctgaagctgccaccgataagtgacaggaggccaccaccatggaccctcccctcgg 335

                
Query: 313 gaaca 317
           |||||
Sbjct: 336 gaaca 340
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>gb|AY109528.1| Zea mays CL35118_-1 mRNA sequence
          Length = 607

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 153/189 (80%)
 Strand = Plus / Plus

                                                                       
Query: 369 ggcatcatggagcgaggcacaagcagctgaggaggtatcatcgattggctcctcactgtg 428
           |||||||| |||||||| || |||| ||| ||||| ||||| |||||||||||||| |||
Sbjct: 336 ggcatcatagagcgaggaaccagcacctgtggaggaatcattgattggctcctcacagtg 395

                                                                       
Query: 429 ccatcactatctgatgcggtgctgatgcctgatgaggaatgctcattggtcatgctactt 488
           || || |  || || ||||||||||  || || || || ||||| || |||||||| |||
Sbjct: 396 ccgtcgcagtcggaagcggtgctgacaccagaggacgagtgctcgttcgtcatgctgctt 455

                                                                       
Query: 489 gcagcggtagttgatgatgccacaatgccactgaagaggcctggtccgatcatgctccct 548
           || ||||| |  |||||  | |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 456 gctgcggtggcagatgacacaacaatgccgctgaagagacctggtccaatcatgcttcct 515

                    
Query: 549 ccactcttc 557
            || |||||
Sbjct: 516 acattcttc 524



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 253 cgttcctgaagctgccaccgaggagtgacagtaggccgccaccatgcacccttccctcag 312
           ||||||||||||||||||| |  |||||||| ||||| |||||||| ||||| ||||| |
Sbjct: 223 cgttcctgaagctgccaccaataagtgacaggaggccaccaccatggaccctcccctcgg 282

                
Query: 313 gaaca 317
           |||||
Sbjct: 283 gaaca 287
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>ref|XM_466391.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2634

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 251  gacgttcctgaagctgccaccgaggagtgacagtaggccgccaccatgcacccttccctc 310
            ||||||||||||||| || ||||| |  ||||| ||||||||||| |||||||| |||||
Sbjct: 2360 gacgttcctgaagctcccgccgagcaacgacaggaggccgccaccgtgcaccctcccctc 2301
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 251      gacgttcctgaagctgccaccgaggagtgacagtaggccgccaccatgcacccttccctc 310
                ||||||||||||||| || ||||| |  ||||| ||||||||||| |||||||| |||||
Sbjct: 22119851 gacgttcctgaagctcccgccgagcaacgacaggaggccgccaccgtgcaccctcccctc 22119792
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                         
Query: 251   gacgttcctgaagctgccaccgaggagtgacagtaggccgccaccatgcacccttccctc 310
             ||||||||||||||| || ||||| |  ||||| ||||||||||| |||||||| |||||
Sbjct: 93750 gacgttcctgaagctcccgccgagcaacgacaggaggccgccaccgtgcaccctcccctc 93691
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>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1342F01
          Length = 153287

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                         
Query: 251   gacgttcctgaagctgccaccgaggagtgacagtaggccgccaccatgcacccttccctc 310
             ||||||||||||||| || ||||| |  ||||| ||||||||||| |||||||| |||||
Sbjct: 15695 gacgttcctgaagctcccgccgagcaacgacaggaggccgccaccgtgcaccctcccctc 15636
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>dbj|AK105763.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D10, full
            insert sequence
          Length = 2635

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 251  gacgttcctgaagctgccaccgaggagtgacagtaggccgccaccatgcacccttccctc 310
            ||||||||||||||| || ||||| |  ||||| ||||||||||| |||||||| |||||
Sbjct: 2360 gacgttcctgaagctcccgccgagcaacgacaggaggccgccaccgtgcaccctcccctc 2301
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>ref|XM_363406.1| Magnaporthe grisea 70-15 hypothetical protein (MG01332.4) partial
            mRNA
          Length = 4887

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 357  gatgatgacgagggcatcatgga 379
            |||||||||||||||||||||||
Sbjct: 1667 gatgatgacgagggcatcatgga 1645
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>gb|AC163610.4| Mus musculus BAC clone RP23-59P17 from chromosome 13, complete sequence
          Length = 237111

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    aacatccatgaaatgttcat 138
              ||||||||||||||||||||
Sbjct: 208013 aacatccatgaaatgttcat 208032
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>gb|AC153158.1| Ornithorhynchus anatinus chromosome UNK clone OABb-11C18, complete
             sequence
          Length = 109518

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    cagtaactacgactgactgactgg 58
             |||||| |||||||||||||||||
Sbjct: 91021 cagtaaatacgactgactgactgg 90998
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>gb|AE008424.1| Streptococcus pneumoniae R6 section 40 of 184 of the complete genome
          Length = 11342

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 126  atgaaatgttcatcaagctataag 149
            ||||||||||||||||| ||||||
Sbjct: 1103 atgaaatgttcatcaagatataag 1126
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 345     acggtaggctccgatgatga 364
               ||||||||||||||||||||
Sbjct: 1982137 acggtaggctccgatgatga 1982156
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>gb|BC081840.1| Rattus norvegicus guanylate cyclase 1, soluble, beta 3, mRNA (cDNA
            clone MGC:93604 IMAGE:7104600), complete cds
          Length = 3217

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ccacaatgccactgaagagg 527
            ||||||||||||||||||||
Sbjct: 1373 ccacaatgccactgaagagg 1354
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>gb|AC146448.4| Pan troglodytes BAC clone RP43-5H14 from 7, complete sequence
          Length = 203611

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gaaacagtatatcaaataca 20
            ||||||||||||||||||||
Sbjct: 8930 gaaacagtatatcaaataca 8911
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>gb|AC127695.3| Mus musculus BAC clone RP23-310B17 from 17, complete sequence
          Length = 172891

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    atgcagatcagaagaattgccgga 95
             ||||||||||| ||||||||||||
Sbjct: 69964 atgcagatcagcagaattgccgga 69941
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>gb|AC142322.1| Pan troglodytes BAC clone RP43-66C5 from 7, complete sequence
          Length = 167122

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     gaaacagtatatcaaataca 20
             ||||||||||||||||||||
Sbjct: 34861 gaaacagtatatcaaataca 34880
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>ref|XM_780536.1| PREDICTED: Strongylocentrotus purpuratus similar to CCAAT/enhancer
            binding protein zeta (LOC580482), mRNA
          Length = 2265

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 120  acatccatgaaatgttcatc 139
            ||||||||||||||||||||
Sbjct: 1736 acatccatgaaatgttcatc 1717
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>emb|Z14133.1|DMCHC D.melanogaster Chc mRNA for clathrin heavy chain
          Length = 5610

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 487 ttgcagcggtagttgatgat 506
           ||||||||||||||||||||
Sbjct: 763 ttgcagcggtagttgatgat 744
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>gb|AY119615.1| Drosophila melanogaster LD43101 full insert cDNA
          Length = 5506

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 487 ttgcagcggtagttgatgat 506
           ||||||||||||||||||||
Sbjct: 833 ttgcagcggtagttgatgat 814
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>ref|NM_206729.1| Drosophila melanogaster Clathrin heavy chain CG9012-RC, transcript
           variant C (Chc), mRNA
          Length = 5718

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 487 ttgcagcggtagttgatgat 506
           ||||||||||||||||||||
Sbjct: 871 ttgcagcggtagttgatgat 852
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>ref|NM_206728.1| Drosophila melanogaster Clathrin heavy chain CG9012-RD, transcript
           variant D (Chc), mRNA
          Length = 5777

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 487 ttgcagcggtagttgatgat 506
           ||||||||||||||||||||
Sbjct: 930 ttgcagcggtagttgatgat 911
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>ref|NM_167466.1| Drosophila melanogaster Clathrin heavy chain CG9012-RB, transcript
           variant B (Chc), mRNA
          Length = 5608

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 487 ttgcagcggtagttgatgat 506
           ||||||||||||||||||||
Sbjct: 761 ttgcagcggtagttgatgat 742
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>ref|NM_057694.2| Drosophila melanogaster Clathrin heavy chain CG9012-RA, transcript
           variant A (Chc), mRNA
          Length = 5680

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 487 ttgcagcggtagttgatgat 506
           ||||||||||||||||||||
Sbjct: 833 ttgcagcggtagttgatgat 814
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>ref|NM_012769.2| Rattus norvegicus guanylate cyclase 1, soluble, beta 3 (Gucy1b3),
            mRNA
          Length = 3217

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ccacaatgccactgaagagg 527
            ||||||||||||||||||||
Sbjct: 1373 ccacaatgccactgaagagg 1354
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>gb|AC090943.3| Homo sapiens chromosome 3 clone RP11-22O15 map 3p, complete sequence
          Length = 162949

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   tgatgccacaatgccactga 522
             ||||||||||||||||||||
Sbjct: 58303 tgatgccacaatgccactga 58322
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>gb|AC092401.1|AC092401 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone
              BACR25C18, complete sequence
          Length = 185200

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    ttgcagcggtagttgatgat 506
              ||||||||||||||||||||
Sbjct: 144565 ttgcagcggtagttgatgat 144584
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>gb|AC013431.9|AC013431 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone
              BACR22H11, complete sequence
          Length = 191558

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    ttgcagcggtagttgatgat 506
              ||||||||||||||||||||
Sbjct: 123295 ttgcagcggtagttgatgat 123314
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 559      ccattccatgttcttgctgcctgg 582
                ||||||||| ||||||||||||||
Sbjct: 15344115 ccattccatcttcttgctgcctgg 15344138
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>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18,
             complete sequence
          Length = 144720

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 559   ccattccatgttcttgctgcctgg 582
             ||||||||| ||||||||||||||
Sbjct: 61478 ccattccatcttcttgctgcctgg 61501
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>gb|DQ023143.1| Scleropages formosus mitochondrion, complete genome
          Length = 16651

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   ctgatgaggaatgctcattg 476
             ||||||||||||||||||||
Sbjct: 13090 ctgatgaggaatgctcattg 13071
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>gb|AC091291.2| Homo sapiens chromosome 3 clone RP11-654A18 map 3p, complete sequence
          Length = 184579

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   tgatgccacaatgccactga 522
             ||||||||||||||||||||
Sbjct: 15826 tgatgccacaatgccactga 15845
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>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 126    atgaaatgttcatcaagctataag 149
              ||||||||||||||||| ||||||
Sbjct: 475239 atgaaatgttcatcaagatataag 475262
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>gb|AC009178.4|AC009178 Homo sapiens clone RP11-169C22 from 7q31, complete sequence
          Length = 178097

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      gaaacagtatatcaaataca 20
              ||||||||||||||||||||
Sbjct: 169159 gaaacagtatatcaaataca 169140
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>gb|AC007790.1|AC007790 Homo sapiens clone RP11-283D18 from 7q31, complete sequence
          Length = 207791

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     gaaacagtatatcaaataca 20
             ||||||||||||||||||||
Sbjct: 63411 gaaacagtatatcaaataca 63392
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>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete
              sequence
          Length = 303344

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    ttgcagcggtagttgatgat 506
              ||||||||||||||||||||
Sbjct: 127285 ttgcagcggtagttgatgat 127304
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>gb|AC113315.8| Mus musculus chromosome 3, clone RP23-441B22, complete sequence
          Length = 187126

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   gccactgaagaggcctggtc 534
             ||||||||||||||||||||
Sbjct: 70622 gccactgaagaggcctggtc 70641
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>dbj|AB099521.2| Rattus norvegicus mRNA for soluble guanylyl cyclase beta 1 subunit,
            complete cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ccacaatgccactgaagagg 527
            ||||||||||||||||||||
Sbjct: 1285 ccacaatgccactgaagagg 1266
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>dbj|AB099520.1| Rattus norvegicus mRNA for soluble guanylyl cyclase beta 1 subunit,
            complete cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ccacaatgccactgaagagg 527
            ||||||||||||||||||||
Sbjct: 1285 ccacaatgccactgaagagg 1266
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>dbj|AB098707.1| Rattus norvegicus mRNA for soluble guanylyl cyclase beta 1 subunit,
            complete cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ccacaatgccactgaagagg 527
            ||||||||||||||||||||
Sbjct: 1285 ccacaatgccactgaagagg 1266
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>dbj|AB098025.1| Rattus norvegicus mRNA for soluble guanylyl cyclase beta 1 subunit,
            complete cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ccacaatgccactgaagagg 527
            ||||||||||||||||||||
Sbjct: 1285 ccacaatgccactgaagagg 1266
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>ref|NM_001018034.1| Canis familiaris guanylate cyclase 1, soluble, beta 3 (GUCY1B3), mRNA
          Length = 2207

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ccacaatgccactgaagagg 527
            ||||||||||||||||||||
Sbjct: 1306 ccacaatgccactgaagagg 1287
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>gb|DQ008576.1| Canis familiaris soluble guanylate cyclase 1 beta 3 (Gucy1b3) mRNA,
            complete cds
          Length = 2207

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ccacaatgccactgaagagg 527
            ||||||||||||||||||||
Sbjct: 1306 ccacaatgccactgaagagg 1287
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 559      ccattccatgttcttgctgcctgg 582
                ||||||||| ||||||||||||||
Sbjct: 15352356 ccattccatcttcttgctgcctgg 15352379
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>emb|AL935265.4| Zebrafish DNA sequence from clone DKEY-66M24, complete sequence
          Length = 197137

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aaacagtatatcaaatacac 21
              ||||||||||||||||||||
Sbjct: 116407 aaacagtatatcaaatacac 116388
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>gb|M22562.1|RATGCS Rat soluble guanylate cyclase 70kd subunit mRNA, complete cds
          Length = 3047

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  ccacaatgccactgaagagg 527
            ||||||||||||||||||||
Sbjct: 1326 ccacaatgccactgaagagg 1307


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,019,434
Number of Sequences: 3902068
Number of extensions: 5019434
Number of successful extensions: 87007
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86787
Number of HSP's gapped (non-prelim): 220
length of query: 582
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 559
effective length of database: 17,143,297,704
effective search space: 9583103416536
effective search space used: 9583103416536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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