>dbj|AK116392.1| Ciona intestinalis cDNA, clone:citb037o03, full insert sequence
          Length = 1508

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 42  caactaaaatatatacaactaatg 65
           ||||||||||||||||||||||||
Sbjct: 924 caactaaaatatatacaactaatg 901

>gb|AC144711.2| Danio rerio clone CH211-218M15, complete sequence
          Length = 208866

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 31     tgtaaactgaccaactaaaatatata 56
              |||||||||||||||||||| |||||
Sbjct: 200343 tgtaaactgaccaactaaaaaatata 200368

>gb|AC105109.10| Homo sapiens chromosome 15, clone CTD-2343P13, complete sequence
          Length = 76158

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 292   gaaagcattcaccaaacttccagaat 317
             ||||||||| ||||||||||||||||
Sbjct: 22245 gaaagcatttaccaaacttccagaat 22220

>gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, complete sequence
          Length = 171307

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 292    gaaagcattcaccaaacttccagaat 317
              ||||||||| ||||||||||||||||
Sbjct: 149048 gaaagcatttaccaaacttccagaat 149023

>emb|CR556712.11| Zebrafish DNA sequence from clone DKEY-28E7 in linkage group 11, complete
              sequence
          Length = 112718

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 31     tgtaaactgaccaactaaaatatata 56
              |||||||||||||||||||| |||||
Sbjct: 108359 tgtaaactgaccaactaaaaaatata 108334

>emb|CR848705.13| Zebrafish DNA sequence from clone DKEY-8O15 in linkage group 11, complete
              sequence
          Length = 261584

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 31     tgtaaactgaccaactaaaatatata 56
              |||||||||||||||||||| |||||
Sbjct: 253296 tgtaaactgaccaactaaaaaatata 253321

>ref|NM_114656.2| Arabidopsis thaliana binding AT3G47860 mRNA, complete cds
          Length = 1162

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 308  cttccagaatcaaaacactct 328
            |||||||||||||||||||||
Sbjct: 1141 cttccagaatcaaaacactct 1161

>emb|CR717648.2|CNS0GGOM Tetraodon nigroviridis full-length cDNA
          Length = 800

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  ccaactaaaatatatacaact 61
           |||||||||||||||||||||
Sbjct: 742 ccaactaaaatatatacaact 762

>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains
            the 5' end of the MAPKAP1 gene for mitogen-activated
            protein kinase associated protein 1, a novel gene, the 5'
            end of the PBX3 gene for pre-B-cell leukemia
            transcription factor 3 and three CpG islands, complete
            sequence
          Length = 109081

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 216  aacaacttcacaaatgatttg 236
            |||||||||||||||||||||
Sbjct: 2621 aacaacttcacaaatgatttg 2601

>emb|AL158827.27| Human DNA sequence from clone RP11-330M2 on chromosome 9 Contains a
             pseudogene similar to part of a zinc finger protein, two
             novel pseudogenes, a novel gene similar to DKFZP434I1117,
             a novel pseudogene (FLJ23476), two novel gene, a novel
             gene similar to MGC12954 and four CpG islands, complete
             sequence
          Length = 186108

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 388   gaggcttcatttgggtactaa 408
             |||||||||||||||||||||
Sbjct: 10135 gaggcttcatttgggtactaa 10115

>emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome 3, BAC clone T23J7
          Length = 92493

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   cttccagaatcaaaacactct 328
             |||||||||||||||||||||
Sbjct: 80883 cttccagaatcaaaacactct 80863

>gb|AY044334.1| Arabidopsis thaliana putative protein (T23J7.190) mRNA, complete cds
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 308  cttccagaatcaaaacactct 328
            |||||||||||||||||||||
Sbjct: 1122 cttccagaatcaaaacactct 1142

>gb|AC153891.6| Mus musculus 10 BAC RP23-415J15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198332

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 156    aaattatgattaacaacagagacaa 180
              ||||||||||| |||||||||||||
Sbjct: 107266 aaattatgattcacaacagagacaa 107290

>gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, complete sequence
          Length = 154142

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     actaatgctgacacaaaacaa 79
              |||||||||||||||||||||
Sbjct: 101483 actaatgctgacacaaaacaa 101503

>gb|AC168272.8| Mus musculus 10 BAC RP24-261C21 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 189395

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 156   aaattatgattaacaacagagacaa 180
             ||||||||||| |||||||||||||
Sbjct: 46084 aaattatgattcacaacagagacaa 46060

>gb|AC132092.3| Mus musculus BAC clone RP24-470A15 from chromosome 16, complete
             sequence
          Length = 174558

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    acacataactgctgcttcca 118
             ||||||||||||||||||||
Sbjct: 39572 acacataactgctgcttcca 39553

>gb|AC121784.2| Mus musculus BAC clone RP23-378G4 from 12, complete sequence
          Length = 163125

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 288    tttggaaagcattcaccaaacttccaga 315
              ||||||||||||||| | ||||||||||
Sbjct: 101409 tttggaaagcattcagccaacttccaga 101436

>ref|XM_738248.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000956.01.0)
            partial mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 156  aaattatgattaacaacaga 175
            ||||||||||||||||||||
Sbjct: 1367 aaattatgattaacaacaga 1386

>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence
          Length = 154939

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 210    tgacacaacaacttcacaaatgatttgc 237
              |||||| |||||| ||||||||||||||
Sbjct: 124123 tgacactacaactccacaaatgatttgc 124096

>emb|CR361565.8| Zebrafish DNA sequence from clone CH211-242L1 in linkage group 22,
              complete sequence
          Length = 164475

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     ctaatgctgacacaaaacaa 79
              ||||||||||||||||||||
Sbjct: 114992 ctaatgctgacacaaaacaa 114973

>emb|AL772301.7| Mouse DNA sequence from clone RP23-111F12 on chromosome 2, complete
             sequence
          Length = 187665

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 65    gctgacacaaaacaatggatatgg 88
             ||||||||||||||||||| ||||
Sbjct: 50964 gctgacacaaaacaatggagatgg 50941


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,063,962
Number of Sequences: 3902068
Number of extensions: 6063962
Number of successful extensions: 114172
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114141
Number of HSP's gapped (non-prelim): 31
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)