>CO8A_RABIT (P98136) Complement component C8 alpha chain precursor (Complement|
           component 8 alpha subunit)
          Length = 585

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
 Frame = -3

Query: 229 CMHARTIESNMCI*CTYVIY*HR-VYMVRSFGG--------DTANCFVPFACIKPAATGQ 77
           C  +   E   C  C    Y HR +     FGG        D A+C+ P AC++PA  GQ
Sbjct: 39  CQLSSWSEWTDCFPCQDTKYRHRSLLQPNKFGGTICSGDIWDRASCYSPTACLRPAQCGQ 98

Query: 76  CIMC 65
              C
Sbjct: 99  DFQC 102

>VIRB4_AGRTU (P0A3W0) Protein virB4 precursor|
          Length = 789

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 18  IRTFNQLVMCLSTEHRHIIHCPVAAGLMHANGTKQFAVSPPKDRTIY 158
           +R  N +++  + +  H++  P+ A L+    TK F  SP  DR+ Y
Sbjct: 656 VRKNNGMLILATQQPEHVLESPLGASLVAQCMTKIFYPSPTADRSAY 702

>VIRB4_AGRT9 (P0A3W1) Protein virB4 precursor|
          Length = 789

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 18  IRTFNQLVMCLSTEHRHIIHCPVAAGLMHANGTKQFAVSPPKDRTIY 158
           +R  N +++  + +  H++  P+ A L+    TK F  SP  DR+ Y
Sbjct: 656 VRKNNGMLILATQQPEHVLESPLGASLVAQCMTKIFYPSPTADRSAY 702


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,502,857
Number of Sequences: 219361
Number of extensions: 1035029
Number of successful extensions: 2073
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)