ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal26i21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P2RY2_CRIGR (P58825) P2Y purinoceptor 2 (P2Y2) (Fragment) 30 4.1
2KCNK2_HUMAN (O95069) Potassium channel subfamily K member 2 (Out... 30 4.1
3C1R_PANTR (Q5R1W3) Complement C1r subcomponent precursor (EC 3.4... 29 5.4
4C1R_HUMAN (P00736) Complement C1r subcomponent precursor (EC 3.4... 29 5.4
5C1RA_MOUSE (Q8CG16) Complement C1r-A subcomponent precursor (EC ... 29 7.1
6P2RY2_MOUSE (P35383) P2Y purinoceptor 2 (P2Y2) (P2U purinoceptor... 29 7.1
7C1RB_MOUSE (Q8CFG9) Complement C1r-B subcomponent precursor (EC ... 29 7.1
8P2RY2_RAT (P41232) P2Y purinoceptor 2 (P2Y2) (P2U purinoceptor 1... 29 7.1
9BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain ... 28 9.2
10KNAT1_ARATH (P46639) Homeobox protein knotted-1-like 1 (KNAT1) 28 9.2

>P2RY2_CRIGR (P58825) P2Y purinoceptor 2 (P2Y2) (Fragment)|
          Length = 166

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -2

Query: 209 TKIRG*RIGSYATNSTSLWYNLVAYSKKPILFLFSVAHQ--LMCILLFFGR 63
           T +RG RI  + T++  L+ + VAYS   +  LF+V     L+C +L   R
Sbjct: 46  TSVRGTRITCHDTSARELFSHFVAYSSVMLSLLFAVPFSVILVCYVLMARR 96



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>KCNK2_HUMAN (O95069) Potassium channel subfamily K member 2 (Outward rectifying|
           potassium channel protein TREK-1) (TREK-1 K(+) channel
           subunit) (Two-pore potassium channel TPKC1)
          Length = 426

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 147 IIP*ACTISRITSYPSPSDFSFLITSINSSTFRQLFPRADGRSMMCFLFS 296
           IIP   T ++I+ +   S F F  T I +  F  + PR +G  + C +++
Sbjct: 129 IIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYA 178



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>C1R_PANTR (Q5R1W3) Complement C1r subcomponent precursor (EC 3.4.21.41)|
           (Complement component 1, r subcomponent) [Contains:
           Complement C1r subcomponent heavy chain; Complement C1r
           subcomponent light chain]
          Length = 705

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -1

Query: 387 EQGPLPDAYRSCFSHIQPERHFCSCNPS*KVKTESTSCSSHRHAETTVE 241
           E+ P P     C +++    +FCSC P  +++ +  SC +   +E   E
Sbjct: 154 EEDPQPQCQHLCHNYVGG--YFCSCRPGYELQKDRHSCQAECSSELYTE 200



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>C1R_HUMAN (P00736) Complement C1r subcomponent precursor (EC 3.4.21.41)|
           (Complement component 1, r subcomponent) [Contains:
           Complement C1r subcomponent heavy chain; Complement C1r
           subcomponent light chain]
          Length = 705

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -1

Query: 387 EQGPLPDAYRSCFSHIQPERHFCSCNPS*KVKTESTSCSSHRHAETTVE 241
           E+ P P     C +++    +FCSC P  +++ +  SC +   +E   E
Sbjct: 154 EEDPQPQCQHLCHNYVGG--YFCSCRPGYELQEDRHSCQAECSSELYTE 200



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>C1RA_MOUSE (Q8CG16) Complement C1r-A subcomponent precursor (EC 3.4.21.41)|
           (Complement component 1, r-A subcomponent) [Contains:
           Complement C1r-A subcomponent heavy chain; Complement
           C1r-A subcomponent light chain]
          Length = 707

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 408 QRNAVPSEQGPLPDAYRSCFSHIQPERHFCSCNPS*KVKTESTSCSSHRHAETTVE 241
           Q N+V  E+G  P     C +++    +FCSC+P  +++ +  SC +   +E   E
Sbjct: 148 QPNSV--EEGLQPRCQHLCHNYVGG--YFCSCHPGYELQKDGQSCQAECSSELYTE 199



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>P2RY2_MOUSE (P35383) P2Y purinoceptor 2 (P2Y2) (P2U purinoceptor 1) (P2U1) (ATP|
           receptor) (Purinergic receptor)
          Length = 373

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -2

Query: 209 TKIRG*RIGSYATNSTSLWYNLVAYSKKPILFLFSVAHQ--LMCILLFFGR 63
           T +RG RI  + T++  L+ + VAYS   +  LF+V     L+C +L   R
Sbjct: 174 TSVRGTRITCHDTSARELFSHFVAYSSVMLGLLFAVPFSVILVCYVLMARR 224



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>C1RB_MOUSE (Q8CFG9) Complement C1r-B subcomponent precursor (EC 3.4.21.41)|
           (Complement component 1, r-B subcomponent) [Contains:
           Complement C1r-B subcomponent heavy chain; Complement
           C1r-B subcomponent light chain]
          Length = 706

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 408 QRNAVPSEQGPLPDAYRSCFSHIQPERHFCSCNPS*KVKTESTSCSSHRHAETTVE 241
           Q N+V  E+G  P     C +++    +FCSC+P  +++ +  SC +   +E   E
Sbjct: 148 QPNSV--EEGLQPRCQHLCHNYVGG--YFCSCHPGYELQKDGQSCQAECSSELYTE 199



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>P2RY2_RAT (P41232) P2Y purinoceptor 2 (P2Y2) (P2U purinoceptor 1) (P2U1) (ATP|
           receptor) (Purinergic receptor)
          Length = 374

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -2

Query: 209 TKIRG*RIGSYATNSTSLWYNLVAYSKKPILFLFSVAHQ--LMCILLFFGR 63
           T +RG RI  + T++  L+ + VAYS   +  LF+V     L+C +L   R
Sbjct: 174 TSVRGTRITCHDTSARELFSHFVAYSSVMLGLLFAVPFSIILVCYVLMARR 224



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>BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain protein 1B|
           (Williams-Beuren syndrome chromosome region 9 protein
           homolog) (WBRS9)
          Length = 1479

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -2

Query: 83  ILLFFGRHX*L--GTSXXAPWVVEDSM 9
           IL +F RH  L  GT   APWVVED +
Sbjct: 252 ILRYFIRHNALRAGTGENAPWVVEDEL 278



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>KNAT1_ARATH (P46639) Homeobox protein knotted-1-like 1 (KNAT1)|
          Length = 398

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -1

Query: 426 DGNKHHQRNAVPSEQGPLPDAYRSCF--SHIQPERHFCSCNPS*KVKTESTS 277
           + N HHQ    P     LP    +CF   H QP     + NPS  VK+E++S
Sbjct: 55  NNNHHHQHMLFPHMSSLLPQTTENCFRSDHDQPNN---NNNPS--VKSEASS 101


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,592,450
Number of Sequences: 219361
Number of extensions: 1326640
Number of successful extensions: 3143
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3143
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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