ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal26i21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY238991.1| Oryza sativa bHLH transcription factor PTF1 (PTF1... 147 4e-32
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
3dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
4dbj|AK065667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
5dbj|AK062127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
6gb|DQ468654.1| Zea mays bHLH transcription factor PTF1 mRNA, com... 113 5e-22
7gb|AY104063.1| Zea mays PCO134967 mRNA sequence 113 5e-22
8gb|AC163239.3| Carollia perspicillata clone 424F18, complete seq... 46 0.10
9gb|AC144640.3| Carollia perspicillata clone 14D2, complete sequence 46 0.10
10gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 46 0.10
11ref|XM_466283.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.41
12emb|AL023844.1|CEY48A6B Caenorhabditis elegans YAC Y48A6B, compl... 44 0.41
13gb|AC104195.10| Mus musculus chromosome 5, clone RP24-95O4, comp... 44 0.41
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
15dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
16gb|AY112634.1| Zea mays CL58367_1 mRNA sequence 44 0.41
17gb|AC157651.3| Mus musculus BAC clone RP24-363O21 from chromosom... 42 1.6
18emb|AL954709.15| Zebrafish DNA sequence from clone CH211-142N21 ... 42 1.6
19gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome 42 1.6
20gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, comple... 42 1.6
21ref|XM_510327.1| PREDICTED: Pan troglodytes LOC453353 (LOC453353... 40 6.4
22gb|AC102714.16| Mus musculus chromosome 5, clone RP24-298D13, co... 40 6.4
23gb|BC038449.2| Homo sapiens MAX gene associated, mRNA (cDNA clon... 40 6.4
24gb|BC007584.1| Homo sapiens MAX gene associated, mRNA (cDNA clon... 40 6.4
25ref|XM_611671.2| PREDICTED: Bos taurus similar to MAX-interactin... 40 6.4
26ref|XM_869255.1| PREDICTED: Bos taurus similar to MAX-interactin... 40 6.4
27gb|AC133601.3| Mus musculus BAC clone RP24-179O1 from chromosome... 40 6.4
28ref|XM_843737.1| PREDICTED: Canis familiaris similar to Dolichyl... 40 6.4
29ref|XM_736338.1| Plasmodium chabaudi chabaudi exodeoxyribonuclea... 40 6.4
30emb|AL591502.10| Human DNA sequence from clone RP11-199C17 on ch... 40 6.4
31gb|AC073939.6| Mus musculus strain C57BL/6J chromosome 12 clone ... 40 6.4
32gb|AC122210.5| Mus musculus BAC clone RP23-96G7 from chromosome ... 40 6.4
33emb|CR859337.1| Pongo pygmaeus mRNA; cDNA DKFZp469B0120 (from cl... 40 6.4
34dbj|AK055203.1| Homo sapiens cDNA FLJ30641 fis, clone CTONG20028... 40 6.4
35dbj|AK022696.1| Homo sapiens cDNA FLJ12634 fis, clone NT2RM40018... 40 6.4
36gb|AC108466.5| Homo sapiens BAC clone RP11-341K3 from 4, complet... 40 6.4
37ref|XM_944092.1| PREDICTED: Homo sapiens MAX gene associated, tr... 40 6.4
38ref|XM_939296.1| PREDICTED: Homo sapiens MAX gene associated, tr... 40 6.4
39ref|XM_932720.1| PREDICTED: Homo sapiens MAX gene associated, tr... 40 6.4
40ref|XM_031689.8| PREDICTED: Homo sapiens MAX gene associated, tr... 40 6.4
41gb|AC022257.19| Homo sapiens chromosome 8, clone RP11-715M14, co... 40 6.4
42gb|AC073657.5|AC073657 Homo sapiens chromosome 15 clone RP11-107... 40 6.4
43gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, com... 40 6.4
44dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
45gb|AC090141.9| Homo sapiens chromosome 8, clone RP11-140A18, com... 40 6.4
46gb|AC079042.31| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 6.4
47dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
48dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
49dbj|AK025751.1| Homo sapiens cDNA: FLJ22098 fis, clone HEP17040 40 6.4
50emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 ... 40 6.4
51tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy ... 40 6.4
52emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-7... 40 6.4
53emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.4
54gb|AC164609.4| Mus musculus BAC clone RP24-350F17 from chromosom... 40 6.4
55gb|AC126804.3| Mus musculus BAC clone RP23-3F1 from 9, complete ... 40 6.4
56gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complet... 40 6.4
57emb|AL671877.15| Mouse DNA sequence from clone RP23-214E3 on chr... 40 6.4 
>gb|AY238991.1| Oryza sativa bHLH transcription factor PTF1 (PTF1) mRNA, complete cds
          Length = 1862

 Score =  147 bits (74), Expect = 4e-32
 Identities = 121/136 (88%), Gaps = 3/136 (2%)
 Strand = Plus / Minus

                                                                        
Query: 299  tttcaggagggattgcagctgcagaag---tgcctttctggttggatatggctgaagcaa 355
            ||||||||||||||||||| |||| ||   |||||||||||||||||||||| ||||| |
Sbjct: 1498 tttcaggagggattgcagcagcagcagccatgcctttctggttggatatggccgaagcga 1439

                                                                        
Query: 356  gagcgataggcatcaggcagaggcccttgttctgaaggtactgcattgcgttggtgatgc 415
            |||| || |||||||||||||| |||||||||||||| |||||||| ||| || ||||||
Sbjct: 1438 gagcaatgggcatcaggcagagacccttgttctgaagatactgcatcgcgctgatgatgc 1379

                            
Query: 416  ttgtttccatcagctt 431
            | ||||||||||||||
Sbjct: 1378 tcgtttccatcagctt 1363



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                  
Query: 69   aaaaaacaaaagaatacacatcaactgatgtgcaacag 106
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 aaaaaacaaaagaatacacatcaactgatgtgcaacag 1704
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  147 bits (74), Expect = 4e-32
 Identities = 121/136 (88%), Gaps = 3/136 (2%)
 Strand = Plus / Plus

                                                                           
Query: 299     tttcaggagggattgcagctgcagaag---tgcctttctggttggatatggctgaagcaa 355
               ||||||||||||||||||| |||| ||   |||||||||||||||||||||| ||||| |
Sbjct: 4720918 tttcaggagggattgcagcagcagcagccatgcctttctggttggatatggccgaagcga 4720977

                                                                           
Query: 356     gagcgataggcatcaggcagaggcccttgttctgaaggtactgcattgcgttggtgatgc 415
               |||| || |||||||||||||| |||||||||||||| |||||||| ||| || ||||||
Sbjct: 4720978 gagcaatgggcatcaggcagagacccttgttctgaagatactgcatcgcgctgatgatgc 4721037

                               
Query: 416     ttgtttccatcagctt 431
               | ||||||||||||||
Sbjct: 4721038 tcgtttccatcagctt 4721053



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                     
Query: 69      aaaaaacaaaagaatacacatcaactgatgtgcaacag 106
               ||||||||||||||||||||||||||||||||||||||
Sbjct: 4720675 aaaaaacaaaagaatacacatcaactgatgtgcaacag 4720712



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 70       aaaaacaaaagaatacacat 89
                ||||||||||||||||||||
Sbjct: 14420373 aaaaacaaaagaatacacat 14420354
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>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0698A06
          Length = 156514

 Score =  147 bits (74), Expect = 4e-32
 Identities = 121/136 (88%), Gaps = 3/136 (2%)
 Strand = Plus / Plus

                                                                         
Query: 299   tttcaggagggattgcagctgcagaag---tgcctttctggttggatatggctgaagcaa 355
             ||||||||||||||||||| |||| ||   |||||||||||||||||||||| ||||| |
Sbjct: 83517 tttcaggagggattgcagcagcagcagccatgcctttctggttggatatggccgaagcga 83576

                                                                         
Query: 356   gagcgataggcatcaggcagaggcccttgttctgaaggtactgcattgcgttggtgatgc 415
             |||| || |||||||||||||| |||||||||||||| |||||||| ||| || ||||||
Sbjct: 83577 gagcaatgggcatcaggcagagacccttgttctgaagatactgcatcgcgctgatgatgc 83636

                             
Query: 416   ttgtttccatcagctt 431
             | ||||||||||||||
Sbjct: 83637 tcgtttccatcagctt 83652



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                   
Query: 69    aaaaaacaaaagaatacacatcaactgatgtgcaacag 106
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 83274 aaaaaacaaaagaatacacatcaactgatgtgcaacag 83311
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>dbj|AK065667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042L14, full
            insert sequence
          Length = 2200

 Score =  147 bits (74), Expect = 4e-32
 Identities = 121/136 (88%), Gaps = 3/136 (2%)
 Strand = Plus / Minus

                                                                        
Query: 299  tttcaggagggattgcagctgcagaag---tgcctttctggttggatatggctgaagcaa 355
            ||||||||||||||||||| |||| ||   |||||||||||||||||||||| ||||| |
Sbjct: 1864 tttcaggagggattgcagcagcagcagccatgcctttctggttggatatggccgaagcga 1805

                                                                        
Query: 356  gagcgataggcatcaggcagaggcccttgttctgaaggtactgcattgcgttggtgatgc 415
            |||| || |||||||||||||| |||||||||||||| |||||||| ||| || ||||||
Sbjct: 1804 gagcaatgggcatcaggcagagacccttgttctgaagatactgcatcgcgctgatgatgc 1745

                            
Query: 416  ttgtttccatcagctt 431
            | ||||||||||||||
Sbjct: 1744 tcgtttccatcagctt 1729



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                  
Query: 69   aaaaaacaaaagaatacacatcaactgatgtgcaacag 106
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 2107 aaaaaacaaaagaatacacatcaactgatgtgcaacag 2070
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>dbj|AK062127.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D10, full
            insert sequence
          Length = 1497

 Score =  147 bits (74), Expect = 4e-32
 Identities = 121/136 (88%), Gaps = 3/136 (2%)
 Strand = Plus / Minus

                                                                        
Query: 299  tttcaggagggattgcagctgcagaag---tgcctttctggttggatatggctgaagcaa 355
            ||||||||||||||||||| |||| ||   |||||||||||||||||||||| ||||| |
Sbjct: 1140 tttcaggagggattgcagcagcagcagccatgcctttctggttggatatggccgaagcga 1081

                                                                        
Query: 356  gagcgataggcatcaggcagaggcccttgttctgaaggtactgcattgcgttggtgatgc 415
            |||| || |||||||||||||| |||||||||||||| |||||||| ||| || ||||||
Sbjct: 1080 gagcaatgggcatcaggcagagacccttgttctgaagatactgcatcgcgctgatgatgc 1021

                            
Query: 416  ttgtttccatcagctt 431
            | ||||||||||||||
Sbjct: 1020 tcgtttccatcagctt 1005



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                  
Query: 69   aaaaaacaaaagaatacacatcaactgatgtgcaacag 106
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 aaaaaacaaaagaatacacatcaactgatgtgcaacag 1346
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>gb|DQ468654.1| Zea mays bHLH transcription factor PTF1 mRNA, complete cds
          Length = 1670

 Score =  113 bits (57), Expect = 5e-22
 Identities = 90/101 (89%)
 Strand = Plus / Minus

                                                                        
Query: 331  ttctggttggatatggctgaagcaagagcgataggcatcaggcagaggcccttgttctga 390
            |||||| |||||||||| |||||||| || |  |||||||||||||| ||||||||||||
Sbjct: 1486 ttctgggtggatatggcggaagcaagggcaactggcatcaggcagagtcccttgttctga 1427

                                                     
Query: 391  aggtactgcattgcgttggtgatgcttgtttccatcagctt 431
            ||||||||||||||| | |||||||| |||||||| |||||
Sbjct: 1426 aggtactgcattgcgcttgtgatgctggtttccattagctt 1386
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>gb|AY104063.1| Zea mays PCO134967 mRNA sequence
          Length = 1382

 Score =  113 bits (57), Expect = 5e-22
 Identities = 90/101 (89%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttctggttggatatggctgaagcaagagcgataggcatcaggcagaggcccttgttctga 390
           |||||| |||||||||| |||||||| || |  |||||||||||||| ||||||||||||
Sbjct: 922 ttctgggtggatatggcggaagcaagggcaactggcatcaggcagagtcccttgttctga 863

                                                    
Query: 391 aggtactgcattgcgttggtgatgcttgtttccatcagctt 431
           ||||||||||||||| | |||||||| |||||||| |||||
Sbjct: 862 aggtactgcattgcgcttgtgatgctggtttccattagctt 822
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>gb|AC163239.3| Carollia perspicillata clone 424F18, complete sequence
          Length = 52968

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 301  tcaggagggattgcagctgcaga 323
            |||||||||||||||||||||||
Sbjct: 3702 tcaggagggattgcagctgcaga 3724
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>gb|AC144640.3| Carollia perspicillata clone 14D2, complete sequence
          Length = 116172

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 301    tcaggagggattgcagctgcaga 323
              |||||||||||||||||||||||
Sbjct: 115845 tcaggagggattgcagctgcaga 115867
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 301    tcaggagggattgcagctgcaga 323
              |||||||||||||||||||||||
Sbjct: 932263 tcaggagggattgcagctgcaga 932285
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>ref|XM_466283.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1575

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 364  ggcatcaggcagaggcccttgttctgaaggtactgcat 401
            ||||| |||||||| |||||| |||| |||||||||||
Sbjct: 1394 ggcatgaggcagagccccttgctctgcaggtactgcat 1357
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>emb|AL023844.1|CEY48A6B Caenorhabditis elegans YAC Y48A6B, complete sequence
          Length = 75073

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 203   ttttagttttctcataacttctatta 228
             |||||||||||||| |||||||||||
Sbjct: 65385 ttttagttttctcaaaacttctatta 65410
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>gb|AC104195.10| Mus musculus chromosome 5, clone RP24-95O4, complete sequence
          Length = 214251

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 213    ctcataacttctattaactctagcac 238
              ||||||||||||| ||||||||||||
Sbjct: 117145 ctcataacttctagtaactctagcac 117120
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 364      ggcatcaggcagaggcccttgttctgaaggtactgcat 401
                ||||| |||||||| |||||| |||| |||||||||||
Sbjct: 21456123 ggcatgaggcagagccccttgctctgcaggtactgcat 21456160
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>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020C11
          Length = 163328

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 364   ggcatcaggcagaggcccttgttctgaaggtactgcat 401
             ||||| |||||||| |||||| |||| |||||||||||
Sbjct: 51050 ggcatgaggcagagccccttgctctgcaggtactgcat 51087
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>gb|AY112634.1| Zea mays CL58367_1 mRNA sequence
          Length = 380

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 364 ggcatcaggcagaggcccttgttctgaaggtactgcat 401
           ||||| ||||| ||||||||| |||| |||||||||||
Sbjct: 289 ggcatgaggcacaggcccttgctctgcaggtactgcat 326
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>gb|AC157651.3| Mus musculus BAC clone RP24-363O21 from chromosome 6, complete sequence
          Length = 171141

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 376    aggcccttgttctgaaggtac 396
              |||||||||||||||||||||
Sbjct: 114735 aggcccttgttctgaaggtac 114755
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>emb|AL954709.15| Zebrafish DNA sequence from clone CH211-142N21 in linkage group 7,
             complete sequence
          Length = 162309

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    aaaacaaaagaatacacatca 91
             |||||||||||||||||||||
Sbjct: 57827 aaaacaaaagaatacacatca 57807
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>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 415    cttgtttccatcagctttata 435
              |||||||||||||||||||||
Sbjct: 255257 cttgtttccatcagctttata 255237
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>gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, complete sequence
          Length = 187115

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 376   aggcccttgttctgaaggtac 396
             |||||||||||||||||||||
Sbjct: 31375 aggcccttgttctgaaggtac 31395
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>ref|XM_510327.1| PREDICTED: Pan troglodytes LOC453353 (LOC453353), mRNA
          Length = 11427

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2450 atgcttgtttccatcagctt 2431
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>gb|AC102714.16| Mus musculus chromosome 5, clone RP24-298D13, complete sequence
          Length = 165774

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   attttagttttctcataact 221
             ||||||||||||||||||||
Sbjct: 22130 attttagttttctcataact 22149
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>gb|BC038449.2| Homo sapiens MAX gene associated, mRNA (cDNA clone IMAGE:5740090),
            partial cds
          Length = 3549

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2657 atgcttgtttccatcagctt 2638
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>gb|BC007584.1| Homo sapiens MAX gene associated, mRNA (cDNA clone IMAGE:3140424),
           partial cds
          Length = 986

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 412 atgcttgtttccatcagctt 431
           ||||||||||||||||||||
Sbjct: 91  atgcttgtttccatcagctt 72
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>ref|XM_611671.2| PREDICTED: Bos taurus similar to MAX-interacting protein, transcript
            variant 1 (LOC532556), mRNA
          Length = 10667

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2644 atgcttgtttccatcagctt 2625
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>ref|XM_869255.1| PREDICTED: Bos taurus similar to MAX-interacting protein, transcript
            variant 2 (LOC532556), mRNA
          Length = 10712

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2689 atgcttgtttccatcagctt 2670
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>gb|AC133601.3| Mus musculus BAC clone RP24-179O1 from chromosome 18, complete sequence
          Length = 180978

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    ctgttttcacctttcaggag 307
              ||||||||||||||||||||
Sbjct: 123517 ctgttttcacctttcaggag 123536
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>ref|XM_843737.1| PREDICTED: Canis familiaris similar to
           Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 67 kDa subunit precursor (Ribophorin
           I) (RPN-I), transcript variant 3 (LOC476516), mRNA
          Length = 2110

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ggttggatatggctgaagca 354
           ||||||||||||||||||||
Sbjct: 512 ggttggatatggctgaagca 493
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>ref|XM_736338.1| Plasmodium chabaudi chabaudi exodeoxyribonuclease III
           (PC000280.03.0) partial mRNA
          Length = 1959

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  aaaaaacaaaagaatacaca 88
           ||||||||||||||||||||
Sbjct: 511 aaaaaacaaaagaatacaca 530
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>emb|AL591502.10| Human DNA sequence from clone RP11-199C17 on chromosome 9 Contains the 5'
              end of the TBC1D2 gene for TBC1 domain family, member 2
              (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823), the 3' end
              of the GPR51 gene for G protein-coupled receptor 51 (HG20,
              GABBR2, GPRC3B, GABABR2) and a CpG island, complete
              sequence
          Length = 156753

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    gctgcagaagtgcctttctg 335
              ||||||||||||||||||||
Sbjct: 121016 gctgcagaagtgcctttctg 120997
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>gb|AC073939.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-218B2, complete
              sequence
          Length = 195281

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     aaaaacaaaagaatacacat 89
              ||||||||||||||||||||
Sbjct: 150523 aaaaacaaaagaatacacat 150504
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>gb|AC122210.5| Mus musculus BAC clone RP23-96G7 from chromosome 10, complete sequence
          Length = 231988

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    ataggtttcttggagtaagc 140
              ||||||||||||||||||||
Sbjct: 194430 ataggtttcttggagtaagc 194411
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>emb|CR859337.1| Pongo pygmaeus mRNA; cDNA DKFZp469B0120 (from clone DKFZp469B0120)
          Length = 3449

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2706 atgcttgtttccatcagctt 2687
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>dbj|AK055203.1| Homo sapiens cDNA FLJ30641 fis, clone CTONG2002820, highly similar to
            Mus musculus MGA protein mRNA
          Length = 3543

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2672 atgcttgtttccatcagctt 2653
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>dbj|AK022696.1| Homo sapiens cDNA FLJ12634 fis, clone NT2RM4001858, weakly similar to
            T-BOX CONTAINING PROTEIN TBX6L
          Length = 2857

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 1980 atgcttgtttccatcagctt 1961
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>gb|AC108466.5| Homo sapiens BAC clone RP11-341K3 from 4, complete sequence
          Length = 178753

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aaaaacaaaagaatacacat 89
             ||||||||||||||||||||
Sbjct: 20096 aaaaacaaaagaatacacat 20077
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>ref|XM_944092.1| PREDICTED: Homo sapiens MAX gene associated, transcript variant 6
            (MGA), mRNA
          Length = 11403

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2700 atgcttgtttccatcagctt 2681
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>ref|XM_939296.1| PREDICTED: Homo sapiens MAX gene associated, transcript variant 5
            (MGA), mRNA
          Length = 11356

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2653 atgcttgtttccatcagctt 2634
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>ref|XM_932720.1| PREDICTED: Homo sapiens MAX gene associated, transcript variant 2
            (MGA), mRNA
          Length = 11400

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2700 atgcttgtttccatcagctt 2681
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>ref|XM_031689.8| PREDICTED: Homo sapiens MAX gene associated, transcript variant 1
            (MGA), mRNA
          Length = 11353

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  atgcttgtttccatcagctt 431
            ||||||||||||||||||||
Sbjct: 2653 atgcttgtttccatcagctt 2634
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>gb|AC022257.19| Homo sapiens chromosome 8, clone RP11-715M14, complete sequence
          Length = 174545

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    aaaaacaaaagaatacacat 89
             ||||||||||||||||||||
Sbjct: 16584 aaaaacaaaagaatacacat 16603
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>gb|AC073657.5|AC073657 Homo sapiens chromosome 15 clone RP11-107F6 map 15q14, complete
             sequence
          Length = 164272

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   atgcttgtttccatcagctt 431
             ||||||||||||||||||||
Sbjct: 65728 atgcttgtttccatcagctt 65709
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>gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, complete sequence
          Length = 228458

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    attttagttttctcataact 221
              ||||||||||||||||||||
Sbjct: 121258 attttagttttctcataact 121277
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 209      ttttctcataacttctatta 228
                ||||||||||||||||||||
Sbjct: 13513925 ttttctcataacttctatta 13513944
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>gb|AC090141.9| Homo sapiens chromosome 8, clone RP11-140A18, complete sequence
          Length = 156054

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     aaaaacaaaagaatacacat 89
              ||||||||||||||||||||
Sbjct: 124885 aaaaacaaaagaatacacat 124904



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aaaaacaaaagaatacacat 89
             ||||||||||||||||||||
Sbjct: 62348 aaaaacaaaagaatacacat 62329
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>gb|AC079042.31| Mus musculus strain C57BL/6J chromosome 3 clone rp23-313f7, complete
             sequence
          Length = 197424

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   gcagaggcccttgttctgaa 391
             ||||||||||||||||||||
Sbjct: 77188 gcagaggcccttgttctgaa 77207
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>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aaaaacaaaagaatacacat 89
             ||||||||||||||||||||
Sbjct: 13547 aaaaacaaaagaatacacat 13528
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>dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0526E12
          Length = 150872

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     aaaaacaaaagaatacacat 89
              ||||||||||||||||||||
Sbjct: 148248 aaaaacaaaagaatacacat 148229
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>dbj|AK025751.1| Homo sapiens cDNA: FLJ22098 fis, clone HEP17040
          Length = 2028

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 412 atgcttgtttccatcagctt 431
           ||||||||||||||||||||
Sbjct: 763 atgcttgtttccatcagctt 744
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>emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 in linkage group 18,
              complete sequence
          Length = 214763

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     atgccgtccaaaaaacaaaa 79
              ||||||||||||||||||||
Sbjct: 172062 atgccgtccaaaaaacaaaa 172081
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>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region
              locus, strain C57BL/6
          Length = 2500000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     aaaaacaaaagaatacacat 89
              ||||||||||||||||||||
Sbjct: 560346 aaaaacaaaagaatacacat 560327
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>emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-783L4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    tcagctttataactttcttg 444
              ||||||||||||||||||||
Sbjct: 159888 tcagctttataactttcttg 159869
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>emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018A10,
             complete sequence
          Length = 133238

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   ttttctcataacttctatta 228
             ||||||||||||||||||||
Sbjct: 41719 ttttctcataacttctatta 41738
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>gb|AC164609.4| Mus musculus BAC clone RP24-350F17 from chromosome 12, complete
             sequence
          Length = 198167

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aaaaacaaaagaatacacat 89
             ||||||||||||||||||||
Sbjct: 14151 aaaaacaaaagaatacacat 14132
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>gb|AC126804.3| Mus musculus BAC clone RP23-3F1 from 9, complete sequence
          Length = 223991

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    aacagagaatagaaaaagta 121
              ||||||||||||||||||||
Sbjct: 130761 aacagagaatagaaaaagta 130780
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>gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complete sequence
          Length = 236806

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    ctgttttcacctttcaggag 307
              ||||||||||||||||||||
Sbjct: 234967 ctgttttcacctttcaggag 234948
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>emb|AL671877.15| Mouse DNA sequence from clone RP23-214E3 on chromosome 3, complete
             sequence
          Length = 146015

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   gcagaggcccttgttctgaa 391
             ||||||||||||||||||||
Sbjct: 27340 gcagaggcccttgttctgaa 27321


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,080,639
Number of Sequences: 3902068
Number of extensions: 5080639
Number of successful extensions: 112192
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111935
Number of HSP's gapped (non-prelim): 252
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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