ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal26i06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT019230.1| Zea mays clone Contig903.F mRNA sequence 232 1e-57
2gb|AY103886.1| Zea mays PCO129988 mRNA sequence 208 2e-50
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 153 8e-34
5emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769... 153 8e-34
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
8emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 121 3e-24
9dbj|AK120247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.033
10gb|AC182738.1| Gasterosteus aculeatus clone VMRC26-26C14, comple... 44 0.52
11gb|AF320302.1|AF320302 Lactobacillus delbrueckii subsp. bulgaric... 44 0.52
12gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 44 0.52
13gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 44 0.52
14gb|AC167331.3| Mus musculus chromosome 1, clone RP23-301L19, com... 42 2.1
15gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 2.1
16ref|XM_388289.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 42 2.1
17gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, c... 42 2.1
18gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 42 2.1
19emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chr... 42 2.1
20gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 8.1
21gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 8.1
22gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 8.1
23ref|XM_676392.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.1
24gb|BC067327.1| Xenopus tropicalis nucleoporin 93kDa, mRNA (cDNA ... 40 8.1
25gb|BC045089.1| Xenopus laevis dead eye-like, mRNA (cDNA clone MG... 40 8.1
26ref|XM_501424.1| Yarrowia lipolytica CLIB122, YALI0C04070g predi... 40 8.1
27emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chr... 40 8.1
28ref|NM_213714.1| Xenopus tropicalis nucleoporin 93kDa (nup93), mRNA 40 8.1
29emb|AL589845.8| Mouse DNA sequence from clone RP23-246J2 on chro... 40 8.1
30gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.1
31dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.1
32gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 8.1
33emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.1
34gb|U63919.1|XLU63919 Xenopus laevis An4a mRNA, complete cds 40 8.1

>gb|BT019230.1| Zea mays clone Contig903.F mRNA sequence
          Length = 727

 Score =  232 bits (117), Expect = 1e-57
 Identities = 255/301 (84%)
 Strand = Plus / Minus

                                                                       
Query: 297 aacttctctccgttgaccaggatgagagggatgtattgcaggaccaatcgtttgcactgt 356
           |||||||| ||||| |||| |||||| || ||||||||||| ||||  |  |||||||| 
Sbjct: 727 aacttctcaccgttcaccaagatgaggggaatgtattgcagaaccagcctcttgcactgc 668

                                                                       
Query: 357 tgctcgtgaccttcgatctttttgcactccttgagaagaatttgaattatctcaaactca 416
           ||  |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| 
Sbjct: 667 tggacgtgaccttcgatcttattgcactccttgacaagaatctgaattatctcaaactcc 608

                                                                       
Query: 417 gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 476
           ||||| |||||||||||||||||||  | |||||| |  || |||||||| ||||| || 
Sbjct: 607 gcatctggatctttcagtttggacatgatttcatcgagcagatggtggcagaacacacac 548

                                                                       
Query: 477 gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccatttcgtttg 536
           ||||| ||||||| |||||| || ||||||||  |||||||||| |||||||  ||||||
Sbjct: 547 gtgctgtcacttcccacaccggagagaagagccgtgtccctgcacaggccataccgtttg 488

                                                                       
Query: 537 cagaactcttctggcttgatctccgcgatcttggcaaataagagagttgcataggagtcc 596
           |||||| |||| ||  ||||||||| |||||||||||| | |||||| ||||| ||||||
Sbjct: 487 cagaacgcttccggtctgatctccgtgatcttggcaaacaggagagtcgcataagagtcc 428

            
Query: 597 a 597
           |
Sbjct: 427 a 427



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>gb|AY103886.1| Zea mays PCO129988 mRNA sequence
          Length = 2158

 Score =  208 bits (105), Expect = 2e-50
 Identities = 204/237 (86%)
 Strand = Plus / Minus

                                                                       
Query: 361 cgtgaccttcgatctttttgcactccttgagaagaatttgaattatctcaaactcagcat 420
           |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||
Sbjct: 939 cgtgaccttcgatcttattgcactccttgacaagaatctgaattatctcaaactccgcat 880

                                                                       
Query: 421 caggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcatgtgc 480
           | |||||||||||||||||||  | |||||| |  || |||||||| ||||| || ||||
Sbjct: 879 ctggatctttcagtttggacatgatttcatcgagcagatggtggcagaacacacacgtgc 820

                                                                       
Query: 481 tctcacttctcacaccagacagaagagcattgtccctgcagaggccatttcgtttgcaga 540
           | ||||||| |||||| || ||||||||  |||||||||| |||||||  ||||||||||
Sbjct: 819 tgtcacttcccacaccggagagaagagccgtgtccctgcacaggccataccgtttgcaga 760

                                                                    
Query: 541 actcttctggcttgatctccgcgatcttggcaaataagagagttgcataggagtcca 597
           || |||| ||  ||||||||| |||||||||||| | |||||| ||||| |||||||
Sbjct: 759 acgcttccggtctgatctccgtgatcttggcaaacaggagagtcgcataagagtcca 703



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  153 bits (77), Expect = 8e-34
 Identities = 155/181 (85%)
 Strand = Plus / Minus

                                                                          
Query: 417    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 476
              ||||||||||||||||||||||||| || |||||| |||| ||||||||| || ||||||
Sbjct: 629322 gcatcaggatctttcagtttggacataatttcatcgatgatgtggtggcagaatacgcat 629263

                                                                          
Query: 477    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccatttcgtttg 536
              ||||| |||||| ||| | | || | ||||||  ||||||||||||||||||   |||||
Sbjct: 629262 gtgctttcacttttcatagctgataaaagagccatgtccctgcagaggccatactgtttg 629203

                                                                          
Query: 537    cagaactcttctggcttgatctccgcgatcttggcaaataagagagttgcataggagtcc 596
              |||||||| |||||||| ||||| || || || ||||| | |||||||||||||||||||
Sbjct: 629202 cagaactcatctggcttaatctcagcaatttttgcaaagacgagagttgcataggagtcc 629143

               
Query: 597    a 597
              |
Sbjct: 629142 a 629142



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 281    atcgttcttctcgaggaacttctctccgtt 310
              |||||||||||| ||||||||||| |||||
Sbjct: 629667 atcgttcttctccaggaacttctcaccgtt 629638



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  153 bits (77), Expect = 8e-34
 Identities = 155/181 (85%)
 Strand = Plus / Minus

                                                                          
Query: 417    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 476
              ||||||||||||||||||||||||| || |||||| |||| ||||||||| || ||||||
Sbjct: 629322 gcatcaggatctttcagtttggacataatttcatcgatgatgtggtggcagaatacgcat 629263

                                                                          
Query: 477    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccatttcgtttg 536
              ||||| |||||| ||| | | || | ||||||  ||||||||||||||||||   |||||
Sbjct: 629262 gtgctttcacttttcatagctgataaaagagccatgtccctgcagaggccatactgtttg 629203

                                                                          
Query: 537    cagaactcttctggcttgatctccgcgatcttggcaaataagagagttgcataggagtcc 596
              |||||||| |||||||| ||||| || || || ||||| | |||||||||||||||||||
Sbjct: 629202 cagaactcatctggcttaatctcagcaatttttgcaaagacgagagttgcataggagtcc 629143

               
Query: 597    a 597
              |
Sbjct: 629142 a 629142



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 281    atcgttcttctcgaggaacttctctccgtt 310
              |||||||||||| ||||||||||| |||||
Sbjct: 629667 atcgttcttctccaggaacttctcaccgtt 629638



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>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 115859

 Score =  153 bits (77), Expect = 8e-34
 Identities = 155/181 (85%)
 Strand = Plus / Plus

                                                                         
Query: 417   gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 476
             ||||||||||||||||||||||||| || |||||| |||| ||||||||| || ||||||
Sbjct: 19521 gcatcaggatctttcagtttggacataatttcatcgatgatgtggtggcagaatacgcat 19580

                                                                         
Query: 477   gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccatttcgtttg 536
             ||||| |||||| ||| | | || | ||||||  ||||||||||||||||||   |||||
Sbjct: 19581 gtgctttcacttttcatagctgataaaagagccatgtccctgcagaggccatactgtttg 19640

                                                                         
Query: 537   cagaactcttctggcttgatctccgcgatcttggcaaataagagagttgcataggagtcc 596
             |||||||| |||||||| ||||| || || || ||||| | |||||||||||||||||||
Sbjct: 19641 cagaactcatctggcttaatctcagcaatttttgcaaagacgagagttgcataggagtcc 19700

              
Query: 597   a 597
             |
Sbjct: 19701 a 19701



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 281   atcgttcttctcgaggaacttctctccgtt 310
             |||||||||||| ||||||||||| |||||
Sbjct: 19176 atcgttcttctccaggaacttctcaccgtt 19205



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  121 bits (61), Expect = 3e-24
 Identities = 151/181 (83%)
 Strand = Plus / Minus

                                                                          
Query: 417    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 476
              ||||||||||||||||||||||||  || |||||| |||| ||||||||| || | ||||
Sbjct: 593033 gcatcaggatctttcagtttggacgtaatttcatcgatgatgtggtggcagaataagcat 592974

                                                                          
Query: 477    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccatttcgtttg 536
              ||||| |||||| | ||| | || | ||||||  ||||||||||||||||||   |||||
Sbjct: 592973 gtgctttcacttttaacagctgataaaagagccatgtccctgcagaggccatactgtttg 592914

                                                                          
Query: 537    cagaactcttctggcttgatctccgcgatcttggcaaataagagagttgcataggagtcc 596
              |||||| |  ||||||||||||| || || || ||||| |  ||||||||||||||||||
Sbjct: 592913 cagaacgcagctggcttgatctcagcaatttttgcaaagacaagagttgcataggagtcc 592854

               
Query: 597    a 597
              |
Sbjct: 592853 a 592853



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 281    atcgttcttctcgaggaacttctctccgttgaccag 316
              |||||||||||| ||||||||||| ||||| |||||
Sbjct: 593384 atcgttcttctccaggaacttctcaccgttcaccag 593349



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  121 bits (61), Expect = 3e-24
 Identities = 151/181 (83%)
 Strand = Plus / Minus

                                                                          
Query: 417    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 476
              ||||||||||||||||||||||||  || |||||| |||| ||||||||| || | ||||
Sbjct: 593033 gcatcaggatctttcagtttggacgtaatttcatcgatgatgtggtggcagaataagcat 592974

                                                                          
Query: 477    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccatttcgtttg 536
              ||||| |||||| | ||| | || | ||||||  ||||||||||||||||||   |||||
Sbjct: 592973 gtgctttcacttttaacagctgataaaagagccatgtccctgcagaggccatactgtttg 592914

                                                                          
Query: 537    cagaactcttctggcttgatctccgcgatcttggcaaataagagagttgcataggagtcc 596
              |||||| |  ||||||||||||| || || || ||||| |  ||||||||||||||||||
Sbjct: 592913 cagaacgcagctggcttgatctcagcaatttttgcaaagacaagagttgcataggagtcc 592854

               
Query: 597    a 597
              |
Sbjct: 592853 a 592853



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 281    atcgttcttctcgaggaacttctctccgttgaccag 316
              |||||||||||| ||||||||||| ||||| |||||
Sbjct: 593384 atcgttcttctccaggaacttctcaccgttcaccag 593349



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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score =  121 bits (61), Expect = 3e-24
 Identities = 151/181 (83%)
 Strand = Plus / Plus

                                                                          
Query: 417    gcatcaggatctttcagtttggacaaaacttcatccatgaggtggtggcaaaacacgcat 476
              ||||||||||||||||||||||||  || |||||| |||| ||||||||| || | ||||
Sbjct: 149939 gcatcaggatctttcagtttggacgtaatttcatcgatgatgtggtggcagaataagcat 149998

                                                                          
Query: 477    gtgctctcacttctcacaccagacagaagagcattgtccctgcagaggccatttcgtttg 536
              ||||| |||||| | ||| | || | ||||||  ||||||||||||||||||   |||||
Sbjct: 149999 gtgctttcacttttaacagctgataaaagagccatgtccctgcagaggccatactgtttg 150058

                                                                          
Query: 537    cagaactcttctggcttgatctccgcgatcttggcaaataagagagttgcataggagtcc 596
              |||||| |  ||||||||||||| || || || ||||| |  ||||||||||||||||||
Sbjct: 150059 cagaacgcagctggcttgatctcagcaatttttgcaaagacaagagttgcataggagtcc 150118

               
Query: 597    a 597
              |
Sbjct: 150119 a 150119



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 281    atcgttcttctcgaggaacttctctccgttgaccag 316
              |||||||||||| ||||||||||| ||||| |||||
Sbjct: 149588 atcgttcttctccaggaacttctcaccgttcaccag 149623



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>dbj|AK120247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044M10, full
           insert sequence
          Length = 1025

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 281 atcgttcttctcgaggaacttctctccgttgaccag 316
           |||||||||||| ||||||||||| ||||| |||||
Sbjct: 741 atcgttcttctccaggaacttctcaccgttcaccag 706



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 547 ctggcttgatctccgcgatcttggcaaataagagagttgcataggagtcca 597
           ||||||||||||| || || || ||||| |  |||||||||||||||||||
Sbjct: 651 ctggcttgatctcagcaatttttgcaaagacaagagttgcataggagtcca 601



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>gb|AC182738.1| Gasterosteus aculeatus clone VMRC26-26C14, complete sequence
          Length = 168680

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 442   aaacttcatccatgaggtggtg 463
             ||||||||||||||||||||||
Sbjct: 25896 aaacttcatccatgaggtggtg 25917



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>gb|AF320302.1|AF320302 Lactobacillus delbrueckii subsp. bulgaricus nitroreductase NAD gene,
            complete cds
          Length = 1880

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 36   ttcatcataccgctccctttat 57
            ||||||||||||||||||||||
Sbjct: 1394 ttcatcataccgctccctttat 1373



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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 36      ttcatcataccgctccctttat 57
               ||||||||||||||||||||||
Sbjct: 4279718 ttcatcataccgctccctttat 4279739



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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 36      ttcatcataccgctccctttat 57
               ||||||||||||||||||||||
Sbjct: 4100546 ttcatcataccgctccctttat 4100567



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>gb|AC167331.3| Mus musculus chromosome 1, clone RP23-301L19, complete sequence
          Length = 197718

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 312    accaggatgagagggatgtat 332
              |||||||||||||||||||||
Sbjct: 124470 accaggatgagagggatgtat 124450



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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 551    cttgatctccgcgatcttggc 571
              |||||||||||||||||||||
Sbjct: 436727 cttgatctccgcgatcttggc 436707



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>ref|XM_388289.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08113.1)
           partial mRNA
          Length = 5241

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 405 atctcaaactcagcatcagga 425
           |||||||||||||||||||||
Sbjct: 482 atctcaaactcagcatcagga 462



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>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence
          Length = 225739

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 259   atgcttgaacgatggtgcata 279
             |||||||||||||||||||||
Sbjct: 28569 atgcttgaacgatggtgcata 28589



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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 411     aactcagcatcaggatctttc 431
               |||||||||||||||||||||
Sbjct: 2337109 aactcagcatcaggatctttc 2337089



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>emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chromosome 17, complete
             sequence
          Length = 177126

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 259   atgcttgaacgatggtgcata 279
             |||||||||||||||||||||
Sbjct: 36475 atgcttgaacgatggtgcata 36455



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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      ttcatcataccgctcccttt 55
               ||||||||||||||||||||
Sbjct: 4141110 ttcatcataccgctcccttt 4141129



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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      ttcatcataccgctcccttt 55
               ||||||||||||||||||||
Sbjct: 4153283 ttcatcataccgctcccttt 4153302



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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      ttcatcataccgctcccttt 55
               ||||||||||||||||||||
Sbjct: 4153658 ttcatcataccgctcccttt 4153677



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>ref|XM_676392.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8215.2), mRNA
          Length = 2055

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcttctcgaggaacttctct 305
            ||||||||||||||||||||
Sbjct: 1933 tcttctcgaggaacttctct 1914



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>gb|BC067327.1| Xenopus tropicalis nucleoporin 93kDa, mRNA (cDNA clone MGC:76268
           IMAGE:5379233), complete cds
          Length = 2592

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 cagacagaagagcattgtcc 515
           ||||||||||||||||||||
Sbjct: 358 cagacagaagagcattgtcc 339



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>gb|BC045089.1| Xenopus laevis dead eye-like, mRNA (cDNA clone MGC:53870
           IMAGE:5543002), complete cds
          Length = 2639

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 cagacagaagagcattgtcc 515
           ||||||||||||||||||||
Sbjct: 403 cagacagaagagcattgtcc 384



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>ref|XM_501424.1| Yarrowia lipolytica CLIB122, YALI0C04070g predicted mRNA
          Length = 1749

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   cagagaatgcagcagcagca 90
            ||||||||||||||||||||
Sbjct: 1261 cagagaatgcagcagcagca 1280



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>emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chromosome 10 Contains
            the TLX1 gene for T-cell leukemia homeobox 1, the 5' end
            of a novel gene, the C10orf1 gene for chromosome 10 open
            reading frame 1 and four CpG islands, complete sequence
          Length = 51099

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  ctcagcatcaggatctttca 432
            ||||||||||||||||||||
Sbjct: 4541 ctcagcatcaggatctttca 4522



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>ref|NM_213714.1| Xenopus tropicalis nucleoporin 93kDa (nup93), mRNA
          Length = 2592

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 cagacagaagagcattgtcc 515
           ||||||||||||||||||||
Sbjct: 358 cagacagaagagcattgtcc 339



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>emb|AL589845.8| Mouse DNA sequence from clone RP23-246J2 on chromosome 4, complete
              sequence
          Length = 175287

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    agaatttgaattatctcaaa 412
              ||||||||||||||||||||
Sbjct: 169221 agaatttgaattatctcaaa 169240



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     agcatcgcatgcttgaacga 270
               ||||||||||||||||||||
Sbjct: 3929501 agcatcgcatgcttgaacga 3929520



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>dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXE2
          Length = 86854

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    cagagaatgcagcagcagca 90
             ||||||||||||||||||||
Sbjct: 67300 cagagaatgcagcagcagca 67319



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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      ttcatcataccgctcccttt 55
               ||||||||||||||||||||
Sbjct: 4153156 ttcatcataccgctcccttt 4153175



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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     cagagaatgcagcagcagca 90
              ||||||||||||||||||||
Sbjct: 536362 cagagaatgcagcagcagca 536343



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>gb|U63919.1|XLU63919 Xenopus laevis An4a mRNA, complete cds
          Length = 3112

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 cagacagaagagcattgtcc 515
           ||||||||||||||||||||
Sbjct: 409 cagacagaagagcattgtcc 390


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,862,785
Number of Sequences: 3902068
Number of extensions: 5862785
Number of successful extensions: 140455
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139988
Number of HSP's gapped (non-prelim): 467
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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