ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal26i05 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 243 bits (619), Expect(2) = 8e-66 Identities = 118/129 (91%), Positives = 123/129 (95%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG Sbjct: 204 PGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 263 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 RGDEEEL KENVKN SSSTG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKI Sbjct: 264 RGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKI 323 Query: 196 QGVWYAQLE 170 QG+WYAQLE Sbjct: 324 QGIWYAQLE 332 Score = 27.7 bits (60), Expect(2) = 8e-66 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAAVTVQLP Sbjct: 193 GIDYAAVTVQLP 204
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 241 bits (616), Expect(2) = 2e-65 Identities = 117/129 (90%), Positives = 123/129 (95%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERVPFLFTVKQLVATGKPESFSG +LVPSYRGSSFLDPKGRGGS GYDNAVALPAGG Sbjct: 201 PGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGG 260 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 RGDEEEL KEN+K+ SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDLG+KAPKDVKI Sbjct: 261 RGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKI 320 Query: 196 QGVWYAQLE 170 QG+WYAQLE Sbjct: 321 QGIWYAQLE 329 Score = 27.7 bits (60), Expect(2) = 2e-65 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAAVTVQLP Sbjct: 190 GIDYAAVTVQLP 201
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 239 bits (610), Expect(2) = 8e-65 Identities = 116/129 (89%), Positives = 122/129 (94%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG Sbjct: 201 PGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 260 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 RGDEEEL KENVKN +S TG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKI Sbjct: 261 RGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKI 320 Query: 196 QGVWYAQLE 170 QG+WYAQLE Sbjct: 321 QGIWYAQLE 329 Score = 27.7 bits (60), Expect(2) = 8e-65 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAAVTVQLP Sbjct: 190 GIDYAAVTVQLP 201
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 235 bits (600), Expect(2) = 1e-63 Identities = 115/130 (88%), Positives = 123/130 (94%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERVPFLFT+KQLVA+GKP+SFSG FLVPSYRGSSFLDPKGRG STGYDNAVALPAGG Sbjct: 200 PGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGG 259 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 RGDEEEL KEN K+A+SS G ITLSVT++KPETGEVIGVFES+QPSDTDLGAKAPKDVKI Sbjct: 260 RGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKI 319 Query: 196 QGVWYAQLES 167 QGVWYAQLES Sbjct: 320 QGVWYAQLES 329 Score = 27.7 bits (60), Expect(2) = 1e-63 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAAVTVQLP Sbjct: 189 GIDYAAVTVQLP 200
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 234 bits (597), Expect(2) = 3e-63 Identities = 113/129 (87%), Positives = 120/129 (93%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERVPFLFTVKQL A+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG Sbjct: 203 PGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 262 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 RGDEEEL+KENVKN ++S G ITL +TKSKPETGEVIGVFES+QPSDTDLGAK PKDVKI Sbjct: 263 RGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKI 322 Query: 196 QGVWYAQLE 170 QGVWY Q+E Sbjct: 323 QGVWYGQIE 331 Score = 27.7 bits (60), Expect(2) = 3e-63 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAAVTVQLP Sbjct: 192 GIDYAAVTVQLP 203
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 234 bits (597), Expect(2) = 3e-63 Identities = 122/131 (93%), Positives = 123/131 (93%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERV FLFTVKQLVATGKPESF PFLVPSYRGSSFLDPKGRGGSTGYDNA ALP GG Sbjct: 198 PGGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGG 256 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL +APKDVKI Sbjct: 257 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPKDVKI 314 Query: 196 QGVWYAQLESN 164 QGVWYAQLESN Sbjct: 315 QGVWYAQLESN 325 Score = 27.7 bits (60), Expect(2) = 3e-63 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAAVTVQLP Sbjct: 187 GIDYAAVTVQLP 198
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 233 bits (595), Expect(2) = 4e-63 Identities = 114/129 (88%), Positives = 120/129 (93%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG Sbjct: 202 PGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 261 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 RGDEEEL KEN KN +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAK PKDVKI Sbjct: 262 RGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKI 321 Query: 196 QGVWYAQLE 170 +GVWYAQLE Sbjct: 322 EGVWYAQLE 330 Score = 27.7 bits (60), Expect(2) = 4e-63 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAAVTVQLP Sbjct: 191 GIDYAAVTVQLP 202
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 233 bits (594), Expect(2) = 6e-63 Identities = 113/130 (86%), Positives = 120/130 (92%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERVPFLFT+KQLVA+GKPESFS FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG Sbjct: 204 PGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 263 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 RGDEEEL KENVKN +S TG IT +VTKS P+TGEVIGVFES+QPSDTDLGAK PKDVKI Sbjct: 264 RGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKI 323 Query: 196 QGVWYAQLES 167 QG+WYAQLES Sbjct: 324 QGIWYAQLES 333 Score = 27.7 bits (60), Expect(2) = 6e-63 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAAVTVQLP Sbjct: 193 GIDYAAVTVQLP 204
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 232 bits (592), Expect(2) = 1e-62 Identities = 113/129 (87%), Positives = 119/129 (92%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERVPFLFTVKQL A+GKP+SF+G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG Sbjct: 204 PGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 263 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 RGDEEEL KENVKN ++S G ITL VTKSKPETGEVIGVFES+QPSDTDLGAK PKDVKI Sbjct: 264 RGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKI 323 Query: 196 QGVWYAQLE 170 QGVWY QLE Sbjct: 324 QGVWYGQLE 332 Score = 27.7 bits (60), Expect(2) = 1e-62 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAAVTVQLP Sbjct: 193 GIDYAAVTVQLP 204
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 174 bits (442), Expect(2) = 5e-45 Identities = 87/129 (67%), Positives = 97/129 (75%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERV FLFT+KQ G + G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPA Sbjct: 165 PGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA-- 222 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 R D EEL KENVK + G+ SV K P TGE+ GVFES+QPSDTDLGAK PKD+K+ Sbjct: 223 RADAEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKV 282 Query: 196 QGVWYAQLE 170 G+WYAQL+ Sbjct: 283 TGLWYAQLK 291 Score = 26.2 bits (56), Expect(2) = 5e-45 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAA TVQLP Sbjct: 154 GIDYAATTVQLP 165
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 171 bits (434), Expect(2) = 4e-44 Identities = 85/128 (66%), Positives = 96/128 (75%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 377 P GERV FLFT+KQ G ++ G F+VPSYRGSSFLDPKGRGGSTGYDNAVALPA Sbjct: 166 PGGERVAFLFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA-- 223 Query: 376 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 R D EEL KENVK+ + G+ SV K TGE+ GVFES+QPSDTDLGAK PKD+KI Sbjct: 224 RADAEELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKI 283 Query: 196 QGVWYAQL 173 G+WY QL Sbjct: 284 TGLWYGQL 291 Score = 26.2 bits (56), Expect(2) = 4e-44 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GIDYAA TVQLP Sbjct: 155 GIDYAATTVQLP 166
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 171 bits (434), Expect(2) = 5e-43 Identities = 83/126 (65%), Positives = 97/126 (76%) Frame = -2 Query: 550 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 371 GERVPFLFT+K L+A G F G F VPSYRG++FLDPKGRGG++GYD AVALPA G Sbjct: 211 GERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPASG-- 268 Query: 370 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQG 191 D+EE AKEN K+ ++S G I V K ETGE+ GVFES+QPSDTDLGAK PKD+K G Sbjct: 269 DDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSG 328 Query: 190 VWYAQL 173 VWYAQ+ Sbjct: 329 VWYAQI 334 Score = 22.7 bits (47), Expect(2) = 5e-43 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = -1 Query: 590 GIDYAAVTVQL 558 G+DYAA TVQL Sbjct: 198 GLDYAATTVQL 208
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 150 bits (378), Expect(2) = 1e-36 Identities = 77/137 (56%), Positives = 96/137 (70%), Gaps = 8/137 (5%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDN 401 P GERVPFLFT+K LVA +P F G F VPSYRG++FLDPKGRG +GYDN Sbjct: 139 PGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDN 198 Query: 400 AVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGA 221 AVALPA + D+E+L + NVK A G I+L + K +GE+ G FES QPSDTDLGA Sbjct: 199 AVALPA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGTFESEQPSDTDLGA 256 Query: 220 KAPKDVKIQGVWYAQLE 170 PK+VKI+G++YA++E Sbjct: 257 DEPKEVKIRGIFYARVE 273 Score = 23.1 bits (48), Expect(2) = 1e-36 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 G+D+ A+TVQLP Sbjct: 128 GLDFQAITVQLP 139
>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 275 Score = 141 bits (356), Expect = 1e-33 Identities = 77/143 (53%), Positives = 96/143 (67%), Gaps = 8/143 (5%) Frame = -2 Query: 577 RPSQCSSPXGERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRG 422 +P P GE+VPF FT+K LV +P F G F VPSYRG++FLDPKGRG Sbjct: 133 QPVTVQLPGGEQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDPKGRG 192 Query: 421 GSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQP 242 +TGYDNAVALPA D+E+ A NVK G+I+L VTK TGE+ GVF+S QP Sbjct: 193 LATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFDSEQP 248 Query: 241 SDTDLGAKAPKDVKIQGVWYAQL 173 SDTDLGAK P +VKI+G++YA++ Sbjct: 249 SDTDLGAKEPVEVKIRGIFYARV 271
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 135 bits (341), Expect = 7e-32 Identities = 74/144 (51%), Positives = 94/144 (65%), Gaps = 8/144 (5%) Frame = -2 Query: 577 RPSQCSSPXGERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRG 422 +P GER+P LFTVK LVA+ +P F G F VPSYR ++FLDPKGRG Sbjct: 130 QPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRG 189 Query: 421 GSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQP 242 ++GYD+A+ALP + EEELA+ NVK S + G I+L+V K TGE+ G FES Q Sbjct: 190 LASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQL 246 Query: 241 SDTDLGAKAPKDVKIQGVWYAQLE 170 SD D+GA P +VKIQGV+YA +E Sbjct: 247 SDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 135 bits (341), Expect = 7e-32 Identities = 74/144 (51%), Positives = 94/144 (65%), Gaps = 8/144 (5%) Frame = -2 Query: 577 RPSQCSSPXGERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRG 422 +P GER+P LFTVK LVA+ +P F G F VPSYR ++FLDPKGRG Sbjct: 130 QPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRG 189 Query: 421 GSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQP 242 ++GYD+A+ALP + EEELA+ NVK S + G I+L+V K TGE+ G FES Q Sbjct: 190 LASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQL 246 Query: 241 SDTDLGAKAPKDVKIQGVWYAQLE 170 SD D+GA P +VKIQGV+YA +E Sbjct: 247 SDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 277 Score = 131 bits (329), Expect(2) = 2e-30 Identities = 72/137 (52%), Positives = 93/137 (67%), Gaps = 8/137 (5%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVA-TGKPES-------FSGPFLVPSYRGSSFLDPKGRGGSTGYDN 401 P GE VPFLFTVK LVA T +P + G + VPSYR S+FLDPK RG +TGY++ Sbjct: 139 PGGEEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTTGYES 198 Query: 400 AVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGA 221 AVA+P+ G D E+L KENVK + G I+L+V+K TGEV GVF ++QPSDTD+G Sbjct: 199 AVAIPSAG--DAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGVFTAIQPSDTDMGG 256 Query: 220 KAPKDVKIQGVWYAQLE 170 K DVK+ G +Y ++E Sbjct: 257 KEAVDVKLVGQFYGRIE 273 Score = 21.2 bits (43), Expect(2) = 2e-30 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -1 Query: 590 GIDYAAVTVQLP 555 GID+ A+TV LP Sbjct: 128 GIDFQAITVLLP 139
>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 274 Score = 128 bits (322), Expect = 1e-29 Identities = 67/139 (48%), Positives = 86/139 (61%), Gaps = 8/139 (5%) Frame = -2 Query: 556 PXGERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDN 401 P GE VPF FTVK T +P F G F VPSYRG+ FLDPK RG TGYDN Sbjct: 140 PGGEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDN 199 Query: 400 AVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGA 221 AVALP+ + + N K G ++L VT+ TGE+ G+FES QPSDTDLGA Sbjct: 200 AVALPSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDTDLGA 254 Query: 220 KAPKDVKIQGVWYAQLESN 164 K P DVK++G++Y +++++ Sbjct: 255 KEPLDVKVRGIFYGRVDTD 273
>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit| of oxygen evolving system of photosystem II) (33 kDa thylakoid membrane protein) (Fragments) Length = 26 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 433 KGRGGSTGYDNAVALPAGGR 374 + +GGSTGYDNAVALPAGGR Sbjct: 7 QSKGGSTGYDNAVALPAGGR 26
>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 34.3 bits (77), Expect = 0.28 Identities = 23/54 (42%), Positives = 28/54 (51%) Frame = -2 Query: 358 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 197 +AKE K G + SV K KP+TGEVI V E + G K P +VKI Sbjct: 13 VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 31.2 bits (69), Expect = 2.3 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 397 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 221 V A G EEE A+ K G + L T SKP+ EVIG FES VQ GA Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129 Query: 220 KAP 212 AP Sbjct: 130 VAP 132
>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 2) Length = 662 Score = 30.8 bits (68), Expect = 3.1 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -2 Query: 379 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 245 G+ E + +N+KN+ NI T S PET E+I +Q Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449
>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)| Length = 560 Score = 30.4 bits (67), Expect = 4.0 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = -2 Query: 475 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 311 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 310 TLSVTKSKP 284 T + + P Sbjct: 489 TGHLEEPMP 497
>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)| Length = 536 Score = 30.4 bits (67), Expect = 4.0 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = -2 Query: 475 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 311 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 310 TLSVTKSKP 284 T + + P Sbjct: 489 TGHLEEPMP 497
>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1) Length = 373 Score = 30.0 bits (66), Expect = 5.2 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 247 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 116 QP + KD+K++G W +Q + N S E K ILI C IR Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336
>DIAC_RAT (Q01460) Di-N-acetylchitobiase precursor (EC 3.2.1.-)| Length = 367 Score = 30.0 bits (66), Expect = 5.2 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -2 Query: 577 RPSQCSSPXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDN 401 R + CS G +VP+ +KQ+ ++ ++ P Y ++ DP GR YDN Sbjct: 262 RGAPCSDAAGHQVPYRVIMKQVNSSVSGSQWNQDQQAPYY---NYKDPTGRLHQVWYDN 317
>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) (Fragment) Length = 319 Score = 30.0 bits (66), Expect = 5.2 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -2 Query: 529 FTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYD 404 F + + A PES +G +VP Y+ S++ +G G TGY+ Sbjct: 5 FATRAIHAGQDPESVTGAVIVPIYQTSTYAQ-RGVGDHTGYE 45
>DIAC_MOUSE (Q8R242) Di-N-acetylchitobiase precursor (EC 3.2.1.-)| Length = 366 Score = 30.0 bits (66), Expect = 5.2 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = -2 Query: 577 RPSQCSSPXGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDN 401 R + CS G +VP+ +KQ+ + ++ P Y ++ DP GR YDN Sbjct: 261 RGAPCSDAAGHQVPYKVIMKQVNGSVSGSQWNKDQQAPYY---NYKDPAGRFHQVWYDN 316
>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA| Length = 598 Score = 29.6 bits (65), Expect = 6.8 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = +3 Query: 123 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 302 +A ++ IFT + D W++ ++ + V D TL++ P P+ G V Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292 Query: 303 LRV---MLPVEEDAFFTF 347 +V + PV D + F Sbjct: 293 PQVYAGLFPVSSDDYEAF 310
>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) Length = 373 Score = 29.3 bits (64), Expect = 8.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 247 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 122 QP + KD+K++G W +Q + N S E K LI C Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332
>PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 687 Score = 29.3 bits (64), Expect = 8.9 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = -2 Query: 457 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 278 RGS+F GG G A AGG G + A + K+A S S ++ P Sbjct: 460 RGSAFTSVSQLGGGGGAGTAGT--AGGSGGGQTAASDERKSAFSQPAR---SFSQLSPLV 514 Query: 277 -GEVIGVFESVQPSD----TDL--GAKAPKDVKIQG 191 G+ +G E P D T L A P VK+QG Sbjct: 515 LGQKLGALEPCHPGDGVGPTRLYPAAADPLAVKLQG 550
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 29.3 bits (64), Expect = 8.9 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = +3 Query: 63 YTHKHIVASILSSPPTNPRMHAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSD 242 Y H S ++ PP P + Q+M+ TS+ ++ PW +S A+ P + S Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528 Query: 243 GCTLSKTPITSPVSGLL 293 + S + +SP + ++ Sbjct: 529 ASSSSSSSASSPAAAVV 545 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,056,713 Number of Sequences: 219361 Number of extensions: 1205246 Number of successful extensions: 4886 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4721 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4867 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
