| Clone Name | rbaal7k14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 93.7 bits (47), Expect = 2e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 123 taccttatttcaattcaggagcatatagtgcagggcaaggtgacacggtatgatcaggca 182 ||||||||||||||||||||||| || | ||||||||||||||||| || || ||||||| Sbjct: 7550074 taccttatttcaattcaggagcaaatggagcagggcaaggtgacacagtgtggtcaggca 7550015 Query: 183 agccacttatgaactcgttagcagcct 209 | || |||||||||| |||||||||| Sbjct: 7550014 aatcatttatgaactcattagcagcct 7549988
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 93.7 bits (47), Expect = 2e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 123 taccttatttcaattcaggagcatatagtgcagggcaaggtgacacggtatgatcaggca 182 ||||||||||||||||||||||| || | ||||||||||||||||| || || ||||||| Sbjct: 7549953 taccttatttcaattcaggagcaaatggagcagggcaaggtgacacagtgtggtcaggca 7549894 Query: 183 agccacttatgaactcgttagcagcct 209 | || |||||||||| |||||||||| Sbjct: 7549893 aatcatttatgaactcattagcagcct 7549867
>emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003_E07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113215 Score = 93.7 bits (47), Expect = 2e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 123 taccttatttcaattcaggagcatatagtgcagggcaaggtgacacggtatgatcaggca 182 ||||||||||||||||||||||| || | ||||||||||||||||| || || ||||||| Sbjct: 38141 taccttatttcaattcaggagcaaatggagcagggcaaggtgacacagtgtggtcaggca 38082 Query: 183 agccacttatgaactcgttagcagcct 209 | || |||||||||| |||||||||| Sbjct: 38081 aatcatttatgaactcattagcagcct 38055
>dbj|AK068145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134J07, full insert sequence Length = 1886 Score = 87.7 bits (44), Expect = 1e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 126 cttatttcaattcaggagcatatagtgcagggcaaggtgacacggtatgatcaggcaagc 185 |||||||||||||||||||| || | ||||||||||||||||| || || |||||||| Sbjct: 1590 cttatttcaattcaggagcaaatggagcagggcaaggtgacacagtgtggtcaggcaaat 1531 Query: 186 cacttatgaactcgttagcagcct 209 || |||||||||| |||||||||| Sbjct: 1530 catttatgaactcattagcagcct 1507
>gb|AY604046.1| Homo sapiens fibroblast growth factor 10 (FGF10) gene, complete cds Length = 87633 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaacaaatcaatgcacactt 56 |||||||||||||||||||| Sbjct: 48463 aaacaaatcaatgcacactt 48444
>gb|AC144481.6| Medicago truncatula clone mth2-35e10, complete sequence Length = 127189 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aatctacatggcctgaaaaa 38 |||||||||||||||||||| Sbjct: 15239 aatctacatggcctgaaaaa 15258
>gb|AC026418.4| Homo sapiens chromosome 5 clone CTD-2100N14, complete sequence Length = 153198 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tttcaattcaggagcatata 149 |||||||||||||||||||| Sbjct: 19818 tttcaattcaggagcatata 19799
>gb|AC093537.2| Homo sapiens chromosome 5 clone RP11-8L21, complete sequence Length = 169812 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaacaaatcaatgcacactt 56 |||||||||||||||||||| Sbjct: 144880 aaacaaatcaatgcacactt 144899
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 acatggcctgaaaaaacaaatcaa 47 |||||||||| ||||||||||||| Sbjct: 21982537 acatggcctggaaaaacaaatcaa 21982514
>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0013G11 Length = 151405 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 acatggcctgaaaaaacaaatcaa 47 |||||||||| ||||||||||||| Sbjct: 74581 acatggcctggaaaaacaaatcaa 74558
>gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosome 16, complete sequence Length = 194274 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 atacagattcgaatctacatggcc 31 ||||||||||||| |||||||||| Sbjct: 92282 atacagattcgaagctacatggcc 92259
>gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome 16, complete sequence Length = 203314 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 atacagattcgaatctacatggcc 31 ||||||||||||| |||||||||| Sbjct: 166416 atacagattcgaagctacatggcc 166439 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,551,145 Number of Sequences: 3902068 Number of extensions: 1551145 Number of successful extensions: 106070 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105954 Number of HSP's gapped (non-prelim): 116 length of query: 209 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 187 effective length of database: 17,147,199,772 effective search space: 3206526357364 effective search space used: 3206526357364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)