>CTR1_RAT (P30823) High-affinity cationic amino acid transporter 1 (CAT-1)|
           (CAT1) (System Y+ basic amino acid transporter)
           (Ecotropic retroviral leukemia receptor) (ERR)
           (Ecotropic retrovirus receptor)
          Length = 624

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
 Frame = -2

Query: 657 PSKKKQKGKTINERDMY-QNNYFHASEAFFSIL--LDKDNSSTILSLKKAGP-EITELLT 490
           P+   Q  +T +E D   QN    ASE+    L   +K +  TILS K   P + + L+ 
Sbjct: 432 PNLVYQMARTTDELDQVDQNEMVSASESQTGFLPAAEKFSLKTILSPKNMEPSKFSGLIV 491

Query: 489 QCSIGIAGTGLAVLLSVVCKIAIGGRTPFAATRLLHTGVGFGLFWLSHAVNGL 331
             S G+    LAVL+  VC +A+ GR   A   L    V  G   L   V G+
Sbjct: 492 NISAGL----LAVLIITVCIVAVLGREALAEGTLWAVFVMTGSVLLCMLVTGI 540

>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)|
          Length = 1075

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 20/80 (25%), Positives = 38/80 (47%)
 Frame = +2

Query: 302 PLNTVVIVFRSPFTAWESQKSPNPTPVCSSRVAAKGVLPPMAILHTTDRRTARPVPAIPI 481
           P +  VIV R+P TA  S  S +   + SS  +++ ++ P    + T       + +  I
Sbjct: 619 PTDETVIVIRTPTTAISSSLSSSSGQITSSITSSRPIITPFYPSNGTS-----VISSSVI 673

Query: 482 EHCVNSSVISGPAFFSERIV 541
              V SS+++  +F S  ++
Sbjct: 674 SSSVTSSLVTSSSFISSSVI 693

>PURA_PASMU (P57889) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 432

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = -2

Query: 381 TGVGFGLFWLSHAVNGLRNTITTVFRGPVDAKLEDEVAVKIQRSMNDILFRAVT 220
           TG GFG   L + +  ++   T V  GP   +L DEV  +I R  N+  F AVT
Sbjct: 251 TGAGFGPRNLDYVLGIIKAYCTRVGGGPFTTELFDEVGSEIARKGNE--FGAVT 302

>ESXA_MYCLE (Q50206) 6 kDa early secretory antigenic target homolog|
           (ESAT-6-like protein) (L-ESAT)
          Length = 95

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 97  WHFSPTETALLNQKGNHTSRCVKLQQCRNSLCKPQSS 207
           WHF   + A+   +G+ +     L+QC+ SL K QSS
Sbjct: 5   WHFPALQGAVNELQGSQSRIDALLEQCQESLTKLQSS 41

>PURA_HAEIN (P45283) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 431

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 381 TGVGFGLFWLSHAVNGLRNTITTVFRGPVDAKLEDEVAVKIQRSMNDILFRAVT 220
           TG GFG   L + +  ++   T V  GP   +L D+V  +I R  N+  F AVT
Sbjct: 250 TGSGFGPRNLDYVLGIIKAYCTRVGGGPFTTELFDDVGAEIARKGNE--FGAVT 301

>PURA_HAEI8 (Q4QL68) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 431

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 381 TGVGFGLFWLSHAVNGLRNTITTVFRGPVDAKLEDEVAVKIQRSMNDILFRAVT 220
           TG GFG   L + +  ++   T V  GP   +L D+V  +I R  N+  F AVT
Sbjct: 250 TGSGFGPRNLDYVLGIIKAYCTRVGGGPFTTELFDDVGAEIARKGNE--FGAVT 301

>VL1_HPV18 (P06794) Major capsid protein L1|
          Length = 568

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 316 GDCVPQSIYRVGEPEEPKPNACVQQPS 396
           GD VPQS+Y  G      P +CV  PS
Sbjct: 329 GDTVPQSLYIKGTGMPASPGSCVYSPS 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,861,817
Number of Sequences: 219361
Number of extensions: 2217494
Number of successful extensions: 6654
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6647
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)