ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal26f19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009431.1| Triticum aestivum clone wlmk1.pk0035.e4:fis, full... 731 0.0
2ref|XM_475647.1| Oryza sativa (japonica cultivar-group), predic... 351 1e-93
3dbj|AK071561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 351 1e-93
4ref|XM_550215.1| Oryza sativa (japonica cultivar-group), mRNA 276 6e-71
5dbj|AK100550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 6e-71
6gb|AY107473.1| Zea mays PCO132850 mRNA sequence 242 8e-61
7gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 174 2e-40
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
10dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
11dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
12gb|AY110040.1| Zea mays CL716_1 mRNA sequence 111 2e-21
13gb|AY600434.1| Tropaeolum majus putative short-chain acyl-CoA ox... 52 0.002
14ref|NM_115043.2| Arabidopsis thaliana ACX4 (ACYL-COA OXIDASE 4);... 48 0.025
15gb|AY125536.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complet... 48 0.025
16gb|AY094441.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complet... 48 0.025
17dbj|AK222131.1| Arabidopsis thaliana mRNA for Short-chain acyl C... 48 0.025
18gb|AY087793.1| Arabidopsis thaliana clone 3844 mRNA, complete se... 48 0.025
19dbj|AB017643.1| Arabidopsis thaliana mRNA for Short-chain acyl C... 48 0.025
20gb|U72505.1|ATU72505 Arabidopsis thaliana putative acyl-coA dehy... 48 0.025
21emb|Z81042.1|CEC27H6 Caenorhabditis elegans Cosmid C27H6, comple... 40 6.0
22gb|AC123834.4| Mus musculus BAC clone RP24-132N9 from chromosome... 40 6.0
23emb|AL356742.12| Human DNA sequence from clone RP11-216C10 on ch... 40 6.0
24emb|CR857871.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0226 (from cl... 40 6.0

>gb|BT009431.1| Triticum aestivum clone wlmk1.pk0035.e4:fis, full insert mRNA
            sequence
          Length = 1652

 Score =  731 bits (369), Expect = 0.0
 Identities = 430/448 (95%), Gaps = 2/448 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttgcacttattccgatcttactcgtacccaccagaatacaaggtggggggtcatactttg 60
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1520 ttgcacttattccgatcttactcgtacccaccagaatacaagg-ggggggtcatactttg 1462

                                                                        
Query: 61   ctgttcatcgtagctggaggcagaagaagaattacagccgagattttgctactgangcgg 120
            |||||||||  ||||||||||||||||||||||||||||||||||| ||||| |  || |
Sbjct: 1461 ctgttcatcaaagctggaggcagaagaagaattacagccgagatttcgctaccgcagcag 1402

                                                                        
Query: 121  gtttgaagctcgcgatcccagtgatttctcttccggtcacaaggctgttgatgtcatagg 180
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1401 gtttgaagctcgcgatcccggtgatttctcttccggtcacaaggctgttgatgtcgtagg 1342

                                                                        
Query: 181  tgccctcgtatgagtaaatcggctccagatcacagaacgcctttgctactagaaaatcag 240
            ||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||||||||
Sbjct: 1341 tgccctcatatgagtaaatcggttccagatcgcagaacgcctttgctactaaaaaatcag 1282

                                                                        
Query: 241  ccaaaattccattgccgcccaatagctctcgacccagagaaactacctcccttgacttgc 300
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1281 ccaaaattccattgccgcccaatagctctcggcccagagaaactacctcccttgacttgc 1222

                                                                        
Query: 301  tggacgtccatgccttgcccaaactagcatggcctggtgtcattttgcctgactcataga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 tggacgtccatgccttgcccaaactagcatggcctggtgtcattttgcctgactcataga 1162

                                                                        
Query: 361  gcttgcacaagcgccagccgacaagaagcatggccctggatgttaccaagcatccgaaca 420
            ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 1161 gcttgcacaagcgccagccgacaaggagcatgg-cctggatgttaccaagcatccgaaca 1103

                                        
Query: 421  agcttttcttggttgatctgaaaggctg 448
            |||||||||||||||| |||||||||||
Sbjct: 1102 agcttttcttggttgagctgaaaggctg 1075



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>ref|XM_475647.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score =  351 bits (177), Expect = 1e-93
 Identities = 292/329 (88%), Gaps = 1/329 (0%)
 Strand = Plus / Minus

                                                                        
Query: 120  ggtttgaagctcgcgatcccagtgatttctcttccggtcacaaggctgttgatgtcatag 179
            ||||||||||| ||||| || ||||| |||||||||||||| | ||||||||||||||||
Sbjct: 1265 ggtttgaagctggcgattccggtgatctctcttccggtcaccaagctgttgatgtcatag 1206

                                                                        
Query: 180  gtgccctcgtatgagtaaatcggctccagatcacagaacgcctttgctactagaaaatca 239
            ||||| ||||| ||| | || ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 1205 gtgccttcgtacgagaagattggctccagatcacagaacgcctttgctaccagaaagtca 1146

                                                                        
Query: 240  gccaaaattccattgccgcccaatagctctcgacccagagaaactacctcccttgacttg 299
            ||||||||||| || || |||| |||||| || || |||||||| |||||||| | ||| 
Sbjct: 1145 gccaaaattccgtttccacccagtagctcacggccaagagaaaccacctccctagccttc 1086

                                                                        
Query: 300  ctggacgtccatgccttgcccaaactagcatggcctggtgtcattttgcctgactcatag 359
             |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 1085 ttggatgtccatgccttgcctaaactagcatggcctggtgtcattttgcctgattcatac 1026

                                                                        
Query: 360  agcttgcacaagcgccagccgacaagaagcatggccctggatgttaccaagcatccgaac 419
            |||||||||| ||||||||||||||||||||||| | |||||||| || ||||| |||||
Sbjct: 1025 agcttgcacaggcgccagccgacaagaagcatgg-cttggatgtttcctagcatgcgaac 967

                                         
Query: 420  aagcttttcttggttgatctgaaaggctg 448
            ||||||||||||||||| |||||| ||||
Sbjct: 966  aagcttttcttggttgagctgaaaagctg 938



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>dbj|AK071561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099O18, full
            insert sequence
          Length = 1568

 Score =  351 bits (177), Expect = 1e-93
 Identities = 292/329 (88%), Gaps = 1/329 (0%)
 Strand = Plus / Minus

                                                                        
Query: 120  ggtttgaagctcgcgatcccagtgatttctcttccggtcacaaggctgttgatgtcatag 179
            ||||||||||| ||||| || ||||| |||||||||||||| | ||||||||||||||||
Sbjct: 1387 ggtttgaagctggcgattccggtgatctctcttccggtcaccaagctgttgatgtcatag 1328

                                                                        
Query: 180  gtgccctcgtatgagtaaatcggctccagatcacagaacgcctttgctactagaaaatca 239
            ||||| ||||| ||| | || ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 1327 gtgccttcgtacgagaagattggctccagatcacagaacgcctttgctaccagaaagtca 1268

                                                                        
Query: 240  gccaaaattccattgccgcccaatagctctcgacccagagaaactacctcccttgacttg 299
            ||||||||||| || || |||| |||||| || || |||||||| |||||||| | ||| 
Sbjct: 1267 gccaaaattccgtttccacccagtagctcacggccaagagaaaccacctccctagccttc 1208

                                                                        
Query: 300  ctggacgtccatgccttgcccaaactagcatggcctggtgtcattttgcctgactcatag 359
             |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 1207 ttggatgtccatgccttgcctaaactagcatggcctggtgtcattttgcctgattcatac 1148

                                                                        
Query: 360  agcttgcacaagcgccagccgacaagaagcatggccctggatgttaccaagcatccgaac 419
            |||||||||| ||||||||||||||||||||||| | |||||||| || ||||| |||||
Sbjct: 1147 agcttgcacaggcgccagccgacaagaagcatgg-cttggatgtttcctagcatgcgaac 1089

                                         
Query: 420  aagcttttcttggttgatctgaaaggctg 448
            ||||||||||||||||| |||||| ||||
Sbjct: 1088 aagcttttcttggttgagctgaaaagctg 1060



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>ref|XM_550215.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1979

 Score =  276 bits (139), Expect = 6e-71
 Identities = 295/346 (85%), Gaps = 1/346 (0%)
 Strand = Plus / Minus

                                                                        
Query: 98   ccgagattttgctactgangcgggtttgaagctcgcgatcccagtgatttctcttccggt 157
            ||||| |||||||| ||  || ||||||||||| ||||||||||| |||||||| || ||
Sbjct: 1422 ccgagcttttgctaatgcggcaggtttgaagcttgcgatcccagttatttctctaccagt 1363

                                                                        
Query: 158  cacaaggctgttgatgtcataggtgccctcgtatgagtaaatcggctccagatcacagaa 217
            ||| |||||||||||||| || ||||| ||||||||||| || |||||||| ||||||||
Sbjct: 1362 caccaggctgttgatgtcgtatgtgccttcgtatgagtatataggctccaggtcacagaa 1303

                                                                        
Query: 218  cgcctttgctactagaaaatcagccaaaattccattgccgcccaatagctctcgacccag 277
             |||||||| |||||||||||||||||||||||||| || ||||| |  |||||||| ||
Sbjct: 1302 tgcctttgcaactagaaaatcagccaaaattccatttccacccaacaattctcgaccgag 1243

                                                                        
Query: 278  agaaactacctcccttgacttgctggacgtccatgccttgcccaaactagcatggcctgg 337
            |||||| ||||| |  | | | ||||| |||||  |||| || ||||||||||| |||||
Sbjct: 1242 agaaaccacctcacgagccattctggaagtccaacccttccctaaactagcatgccctgg 1183

                                                                        
Query: 338  tgtcattttgcctgactcatagagcttgcacaagcgccagccgacaagaagcatggccct 397
            ||||||||| ||||||||||| |||||||| |  |||||||| ||||||||||| | | |
Sbjct: 1182 tgtcattttccctgactcataaagcttgcatagtcgccagccaacaagaagcatcg-ctt 1124

                                                          
Query: 398  ggatgttaccaagcatccgaacaagcttttcttggttgatctgaaa 443
            |||||||||||||||| || ||||| ||||||||||| | ||||||
Sbjct: 1123 ggatgttaccaagcattcgcacaagtttttcttggttcagctgaaa 1078



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>dbj|AK100550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103E08, full
            insert sequence
          Length = 1979

 Score =  276 bits (139), Expect = 6e-71
 Identities = 295/346 (85%), Gaps = 1/346 (0%)
 Strand = Plus / Minus

                                                                        
Query: 98   ccgagattttgctactgangcgggtttgaagctcgcgatcccagtgatttctcttccggt 157
            ||||| |||||||| ||  || ||||||||||| ||||||||||| |||||||| || ||
Sbjct: 1422 ccgagcttttgctaatgcggcaggtttgaagcttgcgatcccagttatttctctaccagt 1363

                                                                        
Query: 158  cacaaggctgttgatgtcataggtgccctcgtatgagtaaatcggctccagatcacagaa 217
            ||| |||||||||||||| || ||||| ||||||||||| || |||||||| ||||||||
Sbjct: 1362 caccaggctgttgatgtcgtatgtgccttcgtatgagtatataggctccaggtcacagaa 1303

                                                                        
Query: 218  cgcctttgctactagaaaatcagccaaaattccattgccgcccaatagctctcgacccag 277
             |||||||| |||||||||||||||||||||||||| || ||||| |  |||||||| ||
Sbjct: 1302 tgcctttgcaactagaaaatcagccaaaattccatttccacccaacaattctcgaccgag 1243

                                                                        
Query: 278  agaaactacctcccttgacttgctggacgtccatgccttgcccaaactagcatggcctgg 337
            |||||| ||||| |  | | | ||||| |||||  |||| || ||||||||||| |||||
Sbjct: 1242 agaaaccacctcacgagccattctggaagtccaacccttccctaaactagcatgccctgg 1183

                                                                        
Query: 338  tgtcattttgcctgactcatagagcttgcacaagcgccagccgacaagaagcatggccct 397
            ||||||||| ||||||||||| |||||||| |  |||||||| ||||||||||| | | |
Sbjct: 1182 tgtcattttccctgactcataaagcttgcatagtcgccagccaacaagaagcatcg-ctt 1124

                                                          
Query: 398  ggatgttaccaagcatccgaacaagcttttcttggttgatctgaaa 443
            |||||||||||||||| || ||||| ||||||||||| | ||||||
Sbjct: 1123 ggatgttaccaagcattcgcacaagtttttcttggttcagctgaaa 1078



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>gb|AY107473.1| Zea mays PCO132850 mRNA sequence
          Length = 1709

 Score =  242 bits (122), Expect = 8e-61
 Identities = 276/326 (84%), Gaps = 1/326 (0%)
 Strand = Plus / Minus

                                                                        
Query: 123  ttgaagctcgcgatcccagtgatttctcttccggtcacaaggctgttgatgtcataggtg 182
            ||||||||||||||||| ||||| ||||| || | ||| ||||| || ||||||||||||
Sbjct: 1421 ttgaagctcgcgatcccggtgatctctctgccagccaccaggctattaatgtcataggtg 1362

                                                                        
Query: 183  ccctcgtatgagtaaatcggctccagatcacagaacgcctttgctactagaaaatcagcc 242
            |||||||| ||| |||| || ||||  ||||| || ||||| || || ||||||||| ||
Sbjct: 1361 ccctcgtacgagaaaatgggttccacgtcacaaaatgccttggcgacaagaaaatcaacc 1302

                                                                        
Query: 243  aaaattccattgccgcccaatagctctcgacccagagaaactacctcccttgacttgctg 302
            ||||| |||||||| |||| ||||||||| || |||||||| |||||||| | |||  ||
Sbjct: 1301 aaaatgccattgccacccagtagctctcgcccaagagaaaccacctccctggccttcttg 1242

                                                                        
Query: 303  gacgtccatgccttgcccaaactagcatggcctggtgtcattttgcctgactcatagagc 362
            |||||||||||||| || |||||||   |||||||||||||||||||||||||||| |||
Sbjct: 1241 gacgtccatgccttacctaaactagaccggcctggtgtcattttgcctgactcatacagc 1182

                                                                        
Query: 363  ttgcacaagcgccagccgacaagaagcatggccctggatgttaccaagcatccgaacaag 422
            |||||||  ||||| || || |||||||| | |||| ||||| |||||||| || |||||
Sbjct: 1181 ttgcacagtcgccatccaacgagaagcatag-cctgaatgttgccaagcatgcggacaag 1123

                                      
Query: 423  cttttcttggttgatctgaaaggctg 448
            ||||||||| |||| |||||| ||||
Sbjct: 1122 cttttcttgattgagctgaaaagctg 1097



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>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score =  174 bits (88), Expect = 2e-40
 Identities = 125/136 (91%), Gaps = 1/136 (0%)
 Strand = Plus / Plus

                                                                         
Query: 313   ccttgcccaaactagcatggcctggtgtcattttgcctgactcatagagcttgcacaagc 372
             ||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| ||
Sbjct: 93712 ccttgcctaaactagcatggcctggtgtcattttgcctgattcatacagcttgcacaggc 93771

                                                                         
Query: 373   gccagccgacaagaagcatggccctggatgttaccaagcatccgaacaagcttttcttgg 432
             ||||||||||||||||||||| | |||||||| || ||||| ||||||||||||||||||
Sbjct: 93772 gccagccgacaagaagcatgg-cttggatgtttcctagcatgcgaacaagcttttcttgg 93830

                             
Query: 433   ttgatctgaaaggctg 448
             |||| |||||| ||||
Sbjct: 93831 ttgagctgaaaagctg 93846



 Score =  117 bits (59), Expect = 3e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                         
Query: 120   ggtttgaagctcgcgatcccagtgatttctcttccggtcacaaggctgttgatgtcatag 179
             ||||||||||| ||||| || ||||| |||||||||||||| | ||||||||||||||||
Sbjct: 92772 ggtttgaagctggcgattccggtgatctctcttccggtcaccaagctgttgatgtcatag 92831

                                                        
Query: 180   gtgccctcgtatgagtaaatcggctccagatcacagaacgcct 222
             ||||| ||||| ||| | || ||||||||||||||||||||||
Sbjct: 92832 gtgccttcgtacgagaagattggctccagatcacagaacgcct 92874



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                         
Query: 220   cctttgctactagaaaatcagccaaaattccattgccgcccaatagctctcgacccagag 279
             |||||||||| ||||| |||||||||||||| || || |||| |||||| || || ||||
Sbjct: 93498 cctttgctaccagaaagtcagccaaaattccgtttccacccagtagctcacggccaagag 93557

                                                 
Query: 280   aaactacctcccttgacttgctggacgtccatgcct 315
             |||| |||||||| | |||  |||| ||||||||||
Sbjct: 93558 aaaccacctccctagccttcttggatgtccatgcct 93593



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  174 bits (88), Expect = 2e-40
 Identities = 125/136 (91%), Gaps = 1/136 (0%)
 Strand = Plus / Plus

                                                                           
Query: 313     ccttgcccaaactagcatggcctggtgtcattttgcctgactcatagagcttgcacaagc 372
               ||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| ||
Sbjct: 3671365 ccttgcctaaactagcatggcctggtgtcattttgcctgattcatacagcttgcacaggc 3671424

                                                                           
Query: 373     gccagccgacaagaagcatggccctggatgttaccaagcatccgaacaagcttttcttgg 432
               ||||||||||||||||||||| | |||||||| || ||||| ||||||||||||||||||
Sbjct: 3671425 gccagccgacaagaagcatgg-cttggatgtttcctagcatgcgaacaagcttttcttgg 3671483

                               
Query: 433     ttgatctgaaaggctg 448
               |||| |||||| ||||
Sbjct: 3671484 ttgagctgaaaagctg 3671499



 Score =  117 bits (59), Expect = 3e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                           
Query: 120     ggtttgaagctcgcgatcccagtgatttctcttccggtcacaaggctgttgatgtcatag 179
               ||||||||||| ||||| || ||||| |||||||||||||| | ||||||||||||||||
Sbjct: 3670425 ggtttgaagctggcgattccggtgatctctcttccggtcaccaagctgttgatgtcatag 3670484

                                                          
Query: 180     gtgccctcgtatgagtaaatcggctccagatcacagaacgcct 222
               ||||| ||||| ||| | || ||||||||||||||||||||||
Sbjct: 3670485 gtgccttcgtacgagaagattggctccagatcacagaacgcct 3670527



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                           
Query: 220     cctttgctactagaaaatcagccaaaattccattgccgcccaatagctctcgacccagag 279
               |||||||||| ||||| |||||||||||||| || || |||| |||||| || || ||||
Sbjct: 3671151 cctttgctaccagaaagtcagccaaaattccgtttccacccagtagctcacggccaagag 3671210

                                                   
Query: 280     aaactacctcccttgacttgctggacgtccatgcct 315
               |||| |||||||| | |||  |||| ||||||||||
Sbjct: 3671211 aaaccacctccctagccttcttggatgtccatgcct 3671246



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  117 bits (59), Expect = 3e-23
 Identities = 108/123 (87%), Gaps = 1/123 (0%)
 Strand = Plus / Plus

                                                                           
Query: 321     aaactagcatggcctggtgtcattttgcctgactcatagagcttgcacaagcgccagccg 380
               ||||||||||| |||||||||||||| ||||||||||| |||||||| |  |||||||| 
Sbjct: 3108089 aaactagcatgccctggtgtcattttccctgactcataaagcttgcatagtcgccagcca 3108148

                                                                           
Query: 381     acaagaagcatggccctggatgttaccaagcatccgaacaagcttttcttggttgatctg 440
               ||||||||||| | | ||||||||||||||||| || ||||| ||||||||||| | |||
Sbjct: 3108149 acaagaagcatcg-cttggatgttaccaagcattcgcacaagtttttcttggttcagctg 3108207

                  
Query: 441     aaa 443
               |||
Sbjct: 3108208 aaa 3108210



 Score =  115 bits (58), Expect = 1e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                           
Query: 98      ccgagattttgctactgangcgggtttgaagctcgcgatcccagtgatttctcttccggt 157
               ||||| |||||||| ||  || ||||||||||| ||||||||||| |||||||| || ||
Sbjct: 3107674 ccgagcttttgctaatgcggcaggtttgaagcttgcgatcccagttatttctctaccagt 3107733

                                                                           
Query: 158     cacaaggctgttgatgtcataggtgccctcgtatgagtaaatcggctccagatcacagaa 217
               ||| |||||||||||||| || ||||| ||||||||||| || |||||||| ||||||||
Sbjct: 3107734 caccaggctgttgatgtcgtatgtgccttcgtatgagtatataggctccaggtcacagaa 3107793

                    
Query: 218     cgcct 222
                ||||
Sbjct: 3107794 tgcct 3107798



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                           
Query: 220     cctttgctactagaaaatcagccaaaattccattgccgcccaatagctctcgacccagag 279
               ||||||| |||||||||||||||||||||||||| || ||||| |  |||||||| ||||
Sbjct: 3107878 cctttgcaactagaaaatcagccaaaattccatttccacccaacaattctcgaccgagag 3107937

                         
Query: 280     aaactacctc 289
               |||| |||||
Sbjct: 3107938 aaaccacctc 3107947



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>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0041E11
          Length = 146335

 Score =  117 bits (59), Expect = 3e-23
 Identities = 108/123 (87%), Gaps = 1/123 (0%)
 Strand = Plus / Plus

                                                                         
Query: 321   aaactagcatggcctggtgtcattttgcctgactcatagagcttgcacaagcgccagccg 380
             ||||||||||| |||||||||||||| ||||||||||| |||||||| |  |||||||| 
Sbjct: 51877 aaactagcatgccctggtgtcattttccctgactcataaagcttgcatagtcgccagcca 51936

                                                                         
Query: 381   acaagaagcatggccctggatgttaccaagcatccgaacaagcttttcttggttgatctg 440
             ||||||||||| | | ||||||||||||||||| || ||||| ||||||||||| | |||
Sbjct: 51937 acaagaagcatcg-cttggatgttaccaagcattcgcacaagtttttcttggttcagctg 51995

                
Query: 441   aaa 443
             |||
Sbjct: 51996 aaa 51998



 Score =  115 bits (58), Expect = 1e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                         
Query: 98    ccgagattttgctactgangcgggtttgaagctcgcgatcccagtgatttctcttccggt 157
             ||||| |||||||| ||  || ||||||||||| ||||||||||| |||||||| || ||
Sbjct: 51462 ccgagcttttgctaatgcggcaggtttgaagcttgcgatcccagttatttctctaccagt 51521

                                                                         
Query: 158   cacaaggctgttgatgtcataggtgccctcgtatgagtaaatcggctccagatcacagaa 217
             ||| |||||||||||||| || ||||| ||||||||||| || |||||||| ||||||||
Sbjct: 51522 caccaggctgttgatgtcgtatgtgccttcgtatgagtatataggctccaggtcacagaa 51581

                  
Query: 218   cgcct 222
              ||||
Sbjct: 51582 tgcct 51586



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                         
Query: 220   cctttgctactagaaaatcagccaaaattccattgccgcccaatagctctcgacccagag 279
             ||||||| |||||||||||||||||||||||||| || ||||| |  |||||||| ||||
Sbjct: 51666 cctttgcaactagaaaatcagccaaaattccatttccacccaacaattctcgaccgagag 51725

                       
Query: 280   aaactacctc 289
             |||| |||||
Sbjct: 51726 aaaccacctc 51735



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>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score =  117 bits (59), Expect = 3e-23
 Identities = 108/123 (87%), Gaps = 1/123 (0%)
 Strand = Plus / Plus

                                                                         
Query: 321   aaactagcatggcctggtgtcattttgcctgactcatagagcttgcacaagcgccagccg 380
             ||||||||||| |||||||||||||| ||||||||||| |||||||| |  |||||||| 
Sbjct: 76129 aaactagcatgccctggtgtcattttccctgactcataaagcttgcatagtcgccagcca 76188

                                                                         
Query: 381   acaagaagcatggccctggatgttaccaagcatccgaacaagcttttcttggttgatctg 440
             ||||||||||| | | ||||||||||||||||| || ||||| ||||||||||| | |||
Sbjct: 76189 acaagaagcatcg-cttggatgttaccaagcattcgcacaagtttttcttggttcagctg 76247

                
Query: 441   aaa 443
             |||
Sbjct: 76248 aaa 76250



 Score =  115 bits (58), Expect = 1e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                         
Query: 98    ccgagattttgctactgangcgggtttgaagctcgcgatcccagtgatttctcttccggt 157
             ||||| |||||||| ||  || ||||||||||| ||||||||||| |||||||| || ||
Sbjct: 75714 ccgagcttttgctaatgcggcaggtttgaagcttgcgatcccagttatttctctaccagt 75773

                                                                         
Query: 158   cacaaggctgttgatgtcataggtgccctcgtatgagtaaatcggctccagatcacagaa 217
             ||| |||||||||||||| || ||||| ||||||||||| || |||||||| ||||||||
Sbjct: 75774 caccaggctgttgatgtcgtatgtgccttcgtatgagtatataggctccaggtcacagaa 75833

                  
Query: 218   cgcct 222
              ||||
Sbjct: 75834 tgcct 75838



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                         
Query: 220   cctttgctactagaaaatcagccaaaattccattgccgcccaatagctctcgacccagag 279
             ||||||| |||||||||||||||||||||||||| || ||||| |  |||||||| ||||
Sbjct: 75918 cctttgcaactagaaaatcagccaaaattccatttccacccaacaattctcgaccgagag 75977

                       
Query: 280   aaactacctc 289
             |||| |||||
Sbjct: 75978 aaaccacctc 75987



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>gb|AY110040.1| Zea mays CL716_1 mRNA sequence
          Length = 1802

 Score =  111 bits (56), Expect = 2e-21
 Identities = 255/320 (79%), Gaps = 1/320 (0%)
 Strand = Plus / Minus

                                                                        
Query: 124  tgaagctcgcgatcccagtgatttctcttccggtcacaaggctgttgatgtcataggtgc 183
            |||||||||||||||| ||||  || || |||||||| |||||||||||||| || ||||
Sbjct: 1385 tgaagctcgcgatcccggtgacctccctgccggtcaccaggctgttgatgtcgtacgtgc 1326

                                                                        
Query: 184  cctcgtatgagtaaatcggctccagatcacagaacgcctttgctactagaaaatcagcca 243
            ||||||| ||||| || |||||||| || ||||||||||| ||||| || || || ||||
Sbjct: 1325 cctcgtacgagtagatgggctccaggtcgcagaacgccttggctacaaggaagtcggcca 1266

                                                                        
Query: 244  aaattccattgccgcccaatagctctcgacccagagaaactacctcccttgacttgctgg 303
            |||| || || || ||||  |||||||| || || || || ||||| |  | | | ||||
Sbjct: 1265 aaatcccgttcccacccagcagctctcggccaagggagaccacctcgcgggccgtcctgg 1206

                                                                        
Query: 304  acgtccatgccttgcccaaactagcatggcctggtgtcattttgcctgactcatagagct 363
            |  |||| ||||| || |  ||||| ||||| || |||||||| || ||||| |||||||
Sbjct: 1205 agttccaagccttccctaggctagcgtggcccggcgtcattttccccgactcgtagagct 1146

                                                                        
Query: 364  tgcacaagcgccagccgacaagaagcatggccctggatgttaccaagcatccgaacaagc 423
            |||| |  ||||||||||| || | ||| |  ||||| |||||| ||||||||  | |||
Sbjct: 1145 tgcagagacgccagccgacgaggaccatcg-actggacgttaccgagcatccgggcgagc 1087

                                
Query: 424  ttttcttggttgatctgaaa 443
            || |||||||| | ||||||
Sbjct: 1086 ttctcttggttcagctgaaa 1067



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>gb|AY600434.1| Tropaeolum majus putative short-chain acyl-CoA oxidase mRNA, complete
            cds
          Length = 1553

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 180  gtgccctcgtatgagtaaatcggctccagatcacagaacgcctttgctactagaaaatca 239
            ||||| |||||||  || || ||||||| |||||| || ||||| || ||||||||||||
Sbjct: 1291 gtgccttcgtatgtatagatgggctccaaatcacaaaatgccttggcaactagaaaatca 1232

                          
Query: 240  gccaaaattccatt 253
            |  |||||||||||
Sbjct: 1231 gataaaattccatt 1218



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>ref|NM_115043.2| Arabidopsis thaliana ACX4 (ACYL-COA OXIDASE 4); oxidoreductase
            AT3G51840 (ACX4) mRNA, complete cds
          Length = 1759

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 210  tcacagaacgcctttgctactagaaaatcagccaaaattccatt 253
            |||||||| ||||||||||| |||||||| || | |||||||||
Sbjct: 1354 tcacagaaagcctttgctaccagaaaatctgctagaattccatt 1311



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>gb|AY125536.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complete cds
          Length = 1311

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 210  tcacagaacgcctttgctactagaaaatcagccaaaattccatt 253
            |||||||| ||||||||||| |||||||| || | |||||||||
Sbjct: 1199 tcacagaaagcctttgctaccagaaaatctgctagaattccatt 1156



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>gb|AY094441.1| Arabidopsis thaliana At3g51840/AtG6 mRNA, complete cds
          Length = 1718

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 210  tcacagaacgcctttgctactagaaaatcagccaaaattccatt 253
            |||||||| ||||||||||| |||||||| || | |||||||||
Sbjct: 1354 tcacagaaagcctttgctaccagaaaatctgctagaattccatt 1311



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>dbj|AK222131.1| Arabidopsis thaliana mRNA for Short-chain acyl CoA oxidase,
           complete cds, clone: RAFL22-95-I12
          Length = 853

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 210 tcacagaacgcctttgctactagaaaatcagccaaaattccatt 253
           |||||||| ||||||||||| |||||||| || | |||||||||
Sbjct: 507 tcacagaaagcctttgctaccagaaaatctgctagaattccatt 464



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>gb|AY087793.1| Arabidopsis thaliana clone 3844 mRNA, complete sequence
          Length = 1626

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 210  tcacagaacgcctttgctactagaaaatcagccaaaattccatt 253
            |||||||| ||||||||||| |||||||| || | |||||||||
Sbjct: 1257 tcacagaaagcctttgctaccagaaaatctgctagaattccatt 1214



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>dbj|AB017643.1| Arabidopsis thaliana mRNA for Short-chain acyl CoA oxidase, complete
            cds
          Length = 1593

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 210  tcacagaacgcctttgctactagaaaatcagccaaaattccatt 253
            |||||||| ||||||||||| |||||||| || | |||||||||
Sbjct: 1238 tcacagaaagcctttgctaccagaaaatctgctagaattccatt 1195



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>gb|U72505.1|ATU72505 Arabidopsis thaliana putative acyl-coA dehydrogenase G6p (AtG6) mRNA,
            complete cds
          Length = 1579

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 210  tcacagaacgcctttgctactagaaaatcagccaaaattccatt 253
            |||||||| ||||||||||| |||||||| || | |||||||||
Sbjct: 1224 tcacagaaagcctttgctaccagaaaatctgctagaattccatt 1181



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>emb|Z81042.1|CEC27H6 Caenorhabditis elegans Cosmid C27H6, complete sequence
          Length = 24775

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   aaaattccattgccgcccaa 262
             ||||||||||||||||||||
Sbjct: 13010 aaaattccattgccgcccaa 12991



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>gb|AC123834.4| Mus musculus BAC clone RP24-132N9 from chromosome 13, complete sequence
          Length = 153028

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   cacaaggctgttgatgtcat 177
             ||||||||||||||||||||
Sbjct: 94000 cacaaggctgttgatgtcat 93981



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>emb|AL356742.12| Human DNA sequence from clone RP11-216C10 on chromosome 20 Contains the
             3' end of a novel gene, complete sequence
          Length = 75588

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   cctgactcatagagcttgca 367
             ||||||||||||||||||||
Sbjct: 51187 cctgactcatagagcttgca 51168



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>emb|CR857871.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0226 (from clone DKFZp459M0226)
          Length = 4240

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 219  gcctttgctactagaaaatc 238
            ||||||||||||||||||||
Sbjct: 2882 gcctttgctactagaaaatc 2863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,381,566
Number of Sequences: 3902068
Number of extensions: 3381566
Number of successful extensions: 53545
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53467
Number of HSP's gapped (non-prelim): 64
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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