Clone Information

BLAST Search Result

Clone Name	rbaal26f07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MYO1_YEAST (P08964) Myosin-1 (Type II myosin)	37	0.028
2	Y1714_ARATH (Q8LE98) Hypothetical protein At1g17140	36	0.047
3	Y1843_ARATH (Q9M9F9) Hypothetical protein At1g78430	35	0.081
4	KTN1_CHICK (Q90631) Kinectin	35	0.081
5	SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-b...	35	0.081
6	CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere prot...	35	0.081
7	EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associate...	35	0.11
8	MAD1_KLUDE (Q874L7) Spindle assembly checkpoint component MAD1 (...	34	0.14
9	RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase	34	0.14
10	EEA1_MOUSE (Q8BL66) Early endosome antigen 1	33	0.31
11	TPM_MIMNO (Q9GZ69) Tropomyosin	33	0.31
12	CYTSA_BRARE (Q2KN93) Cytospin-A	33	0.40
13	MYOJ_DICDI (P54697) Myosin IJ heavy chain	32	0.68
14	SBCC_CLOAB (Q97FK1) Nuclease sbcCD subunit C	32	0.68
15	EXO2_BPR69 (O64299) Exonuclease subunit 2 (EC 3.1.11.-) (Protein...	32	0.68
16	YAK1_SCHPO (Q09915) Hypothetical protein C1F7.01c in chromosome I	32	0.89
17	MYO2_SACKL (Q875Q8) Myosin-2 (Class V unconventional myosin MYO2...	32	0.89
18	ROSR_RHIET (Q52741) Transcriptional regulatory protein rosR (Nod...	31	1.2
19	TPM2_BIOGL (P43689) Tropomyosin 2 (TMII)	31	1.2
20	TPM_HALDV (Q9GZ71) Tropomyosin	31	1.5
21	TPM_CHLNI (O02389) Tropomyosin	31	1.5
22	LIPA_CAEEL (Q21049) Liprin-alpha (LAR-interacting protein alpha)...	30	2.0
23	SYA_THEMA (Q9X1B6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	30	2.0
24	RPGR1_BOVIN (Q9GLM3) X-linked retinitis pigmentosa GTPase regula...	30	2.0
25	MYH10_HUMAN (P35580) Myosin-10 (Myosin heavy chain, nonmuscle II...	30	2.0
26	MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)	30	2.0
27	Y328_MYCGE (Q49419) Hypothetical protein MG328	30	2.6
28	AL2SB_RAT (Q6AY08) Amyotrophic lateral sclerosis 2 chromosomal r...	30	3.4
29	GOGA1_HUMAN (Q92805) Golgin subfamily A member 1 (Golgin-97)	30	3.4
30	TPM_HALRU (Q25145) Tropomyosin	30	3.4
31	RAD50_AQUAE (O67124) Probable DNA double-strand break repair rad...	29	4.4
32	NEK11_HUMAN (Q8NG66) Serine/threonine-protein kinase Nek11 (EC 2...	29	4.4
33	Y864_MYCCT (P43047) Hypothetical protein MCAP_0864 precursor (OR...	29	4.4
34	M12_STRPY (P19401) M protein, serotype 12 precursor (Fragment)	29	4.4
35	PCDC2_PANTR (Q5DRE1) Protocadherin alpha C2 precursor (PCDH-alph...	29	4.4
36	PCDC2_HUMAN (Q9Y5I4) Protocadherin alpha C2 precursor (PCDH-alph...	29	4.4
37	CNN_DROME (P54623) Centrosomin (Protein arrow)	29	4.4
38	MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha iso...	29	5.8
39	IFA3_CAEEL (Q21065) Intermediate filament protein ifa-3 (Interme...	29	5.8
40	ITPR_DROME (P29993) Inositol 1,4,5-trisphosphate receptor (InsP3...	29	5.8
41	MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isofo...	29	5.8
42	MYH11_CHICK (P10587) Myosin-11 (Myosin heavy chain, gizzard smoo...	29	5.8
43	AL2S3_HUMAN (O60296) Amyotrophic lateral sclerosis 2 chromosomal...	28	7.6
44	LIP_STAEQ (Q5HKP6) Lipase precursor (EC 3.1.1.3) (Glycerol ester...	28	7.6
45	TPM1_BIOGL (P42636) Tropomyosin 1 (TMI) (Bg 39)	28	7.6
46	MUTS2_THETN (Q8R9D0) MutS2 protein	28	7.6
47	IF3A_SCHPO (O74760) Probable eukaryotic translation initiation f...	28	7.6
48	MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa)...	28	9.9
49	NEK11_MACFA (Q8WNU8) Serine/threonine-protein kinase Nek11 (EC 2...	28	9.9
50	MYH4_RABIT (Q28641) Myosin-4 (Myosin heavy chain, skeletal muscl...	28	9.9
51	MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)	28	9.9
52	RPOD_BORBU (P52323) RNA polymerase sigma factor rpoD (Sigma-70)	28	9.9
53	MYSC_CHICK (P29616) Myosin heavy chain, cardiac muscle isoform (...	28	9.9
54	MYH3_RAT (P12847) Myosin heavy chain, fast skeletal muscle, embr...	28	9.9

>MYO1_YEAST (P08964) Myosin-1 (Type II myosin)|
          Length = 1928

 Score = 36.6 bits (83), Expect = 0.028
 Identities = 28/132 (21%), Positives = 60/132 (45%)
 Frame = -1

Query: 420  VSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIG 241
            ++KLKN L E+ES        L  +      E    Q++L+    ++KE L++NE L   
Sbjct: 870  INKLKNDLQEMESKKK----FLEEKNQKTVNELENTQDLLN----QEKENLRKNESLLNR 921

Query: 240  LRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNN 61
            ++                 ++I R +  + +  +E   ++Q  +E I++   T++   + 
Sbjct: 922  VKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSK 981

Query: 60   SDDLVRYIRTHN 25
            +++L++ I   N
Sbjct: 982  NNELIKQISDLN 993

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>Y1714_ARATH (Q8LE98) Hypothetical protein At1g17140|
          Length = 344

 Score = 35.8 bits (81), Expect = 0.047
 Identities = 28/115 (24%), Positives = 54/115 (46%)
 Frame = -1

Query: 420 VSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIG 241
           V K+  + +EL S + ++      +L A   E  +L+  L++   E + L KENE L   
Sbjct: 145 VEKIAVEEEELRSGNDEA-----EKLVAKEDEIKMLKARLYDMEKEHESLGKENESLKNQ 199

Query: 240 LRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTID 76
           L            +  E   K+ R+ + +EE   +  A ++EK E++++  D ++
Sbjct: 200 LSDSASEISNVKANEDEMVSKVSRIGEELEESRAK-TAHLKEKLESMEEAKDALE 253

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>Y1843_ARATH (Q9M9F9) Hypothetical protein At1g78430|
          Length = 326

 Score = 35.0 bits (79), Expect = 0.081
 Identities = 23/105 (21%), Positives = 53/105 (50%)
 Frame = -1

Query: 390 LESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXX 211
           L+  + +S       L++   + +VL+  L++   E+  L +ENE L   L+        
Sbjct: 139 LDEKAKESEKTKNDELASKEDQINVLKARLYDLEKERVSLSEENETLKDQLKKTDTEMSC 198

Query: 210 XXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTID 76
                 E A K+ ++ + +EE  +E  A++++K E++++  +T++
Sbjct: 199 AKAKEDEIASKVSQIGEELEE-SNETTAKLKKKLESVEEAKETLE 242

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>KTN1_CHICK (Q90631) Kinectin|
          Length = 1364

 Score = 35.0 bits (79), Expect = 0.081
 Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 21/145 (14%)
 Frame = -1

Query: 438 DSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKEN 259
           DS    V +L  Q D L +   +     +H   A     SVL   LH  +AE+ + LK+ 
Sbjct: 559 DSMQLRVQELVEQNDALNAQLQK-----LHSQMAAQTSASVLAEELHKVIAEKDKQLKQM 613

Query: 258 ED---------------------LAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKD 142
           ED                     + + L+               +A ++ R++K I  KD
Sbjct: 614 EDSLGNEHANLTSKEEELKVLQNMNLSLKSEIQKLQALTNEQAAAAHELERMQKSIHIKD 673

Query: 141 DELAARVQEKREAIKQLSDTIDYHK 67
           D++    ++ RE + Q  +T +  K
Sbjct: 674 DKIRTLEEQLREELAQTVNTKEEFK 698

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>SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-box protein SMC2)|
          Length = 1170

 Score = 35.0 bits (79), Expect = 0.081
 Identities = 28/134 (20%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
 Frame = -1

Query: 411  LKNQLDELESHSS------QSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDL 250
            L  +L+E ES S       Q++     +LS+   E    + +LHN+L   + L  EN DL
Sbjct: 803  LAKELEEQESESERKYDLFQNLELETEQLSS---ELDSNKTLLHNHLKSIESLKLENSDL 859

Query: 249  AIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREA---IKQLSDTI 79
               +R              E  ++++ ++  + E +  +  +  EK+ +   +++L   +
Sbjct: 860  EGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDL 919

Query: 78   DYHKNNSDDLVRYI 37
            + +K+N++++ + I
Sbjct: 920  NKYKSNTNNMEKII 933

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>CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F) (Mitosin)|
            (AH antigen)
          Length = 3210

 Score = 35.0 bits (79), Expect = 0.081
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
 Frame = -1

Query: 414  KLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLR 235
            K+K +  ELESH S+ + C    +     E      +L    ++  ELLK+   L   L+
Sbjct: 2079 KMKEKTQELESHQSECLHC----IQVAEAEVKEKTELLQTLSSDVSELLKDKTHLQEKLQ 2134

Query: 234  XXXXXXXXXXXSATESAEKIVRLEK---IIEEKDDELAARVQE 115
                       +  E   +I +L K   ++ ++ + L AR+ E
Sbjct: 2135 SLEKDSQALSLTKCELENQIAQLNKEKELLVKESESLQARLSE 2177

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>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein|
           p162) (Zinc finger FYVE domain-containing protein 2)
          Length = 1411

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 29/118 (24%), Positives = 46/118 (38%)
 Frame = -1

Query: 405 NQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXX 226
           NQL E      + +T L  +L          Q  LH+ + EQK  L+  +D  + L    
Sbjct: 564 NQLQEKNHTLQEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLE--- 620

Query: 225 XXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDD 52
                      ES EK+ +L+  I+ K + L +    K      L + +D  +N   D
Sbjct: 621 TSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQD 678

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>MAD1_KLUDE (Q874L7) Spindle assembly checkpoint component MAD1 (Mitotic arrest|
           deficient protein 1)
          Length = 674

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 22/103 (21%), Positives = 49/103 (47%)
 Frame = -1

Query: 330 GEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIE 151
           G+   ++ +   Y A++ E   +NE+L + L+              E +EKI  L   ++
Sbjct: 119 GKKQEIEELSRRYEADRFEWKTQNEELDLELKSCKSLISKYEQLLMEQSEKINSLRSEVK 178

Query: 150 EKDDELAARVQEKREAIKQLSDTIDYHKNNSDDLVRYIRTHNR 22
            K+D++A     +++    +++T ++   N   L   I+TH++
Sbjct: 179 NKEDQIAELEVVRQKKDHNITNTEEF--RNLTTLKDIIKTHDQ 219

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>RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase|
          Length = 993

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 14/144 (9%)
 Frame = -1

Query: 438 DSAASVVSKLKNQLDELESHSSQSITCLIHRLSA------------CGGEFSVLQNMLHN 295
           D    ++ K+K ++ ELE    Q     IH+ +                 F  L+   ++
Sbjct: 351 DEKILILDKIKEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNS 410

Query: 294 YLAEQKELLKENEDLAIGLRXXXXXXXXXXXSAT--ESAEKIVRLEKIIEEKDDELAARV 121
           Y    + LLKE  DL   L+             T  E  E+ + LE  ++EK ++L+ ++
Sbjct: 411 Y----ENLLKEKFDLEKKLQNETDEKTKLISELTDFEKIEEKINLENELKEKYEDLSEKI 466

Query: 120 QEKREAIKQLSDTIDYHKNNSDDL 49
            +  E + +    I  +KN+  +L
Sbjct: 467 DKLNEIVLKKESKISEYKNSKAEL 490

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>EEA1_MOUSE (Q8BL66) Early endosome antigen 1|
          Length = 1411

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 27/110 (24%), Positives = 43/110 (39%)
 Frame = -1

Query: 405 NQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXX 226
           NQL E      Q +T L  +L          +  LH+ + EQK  L+  +D  + L    
Sbjct: 564 NQLQEKNHALQQQLTQLTEKLKNQSESHKQAEENLHDQVQEQKAHLRAAQDRVLSLE--- 620

Query: 225 XXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTID 76
                      ES EK+ +L+  I+ K + L +    K      L + +D
Sbjct: 621 TSVSELSSQLNESKEKVSQLDIQIKAKTELLLSAEAAKAAQRADLQNHLD 670



 Score = 28.1 bits (61), Expect = 9.9
 Identities = 23/130 (17%), Positives = 47/130 (36%)
 Frame = -1

Query: 438  DSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKEN 259
            +  + V   LKN   E E  + +    ++    AC       + + H    + +  LKE 
Sbjct: 860  EKLSKVSDSLKNSKSEFEKENQKGKAAVLDLEKAC-------KELKHQLQVQAESALKEQ 912

Query: 258  EDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTI 79
            EDL   L                   ++ + +  +++K+ +     Q+ +  I QL  + 
Sbjct: 913  EDLKKSLEKEKETSQQLKIELNSVKGEVSQAQNTLKQKEKD----EQQLQGTINQLKQSA 968

Query: 78   DYHKNNSDDL 49
            +  K   + L
Sbjct: 969  EQKKKQIEAL 978

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>TPM_MIMNO (Q9GZ69) Tropomyosin|
          Length = 284

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
 Frame = -1

Query: 438 DSAASVVSKLKNQLDELESH---SSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELL 268
           D AA  ++  +  L+  E+    +   +  L   L+  G     LQ  + N  A Q+E  
Sbjct: 163 DEAARKLAITEVDLERAETRLEAADAKVLELEEELTVVGANIKTLQ--VQNDQASQREDS 220

Query: 267 KENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLS 88
            E       +R            ATE+  ++V+L+K ++  +DEL A    ++E  K +S
Sbjct: 221 YEET-----IRDLTKSLKDAENRATEAERQVVKLQKEVDRLEDELLA----EKERYKAIS 271

Query: 87  DTID 76
           D +D
Sbjct: 272 DDLD 275

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>CYTSA_BRARE (Q2KN93) Cytospin-A|
          Length = 1132

 Score = 32.7 bits (73), Expect = 0.40
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = -1

Query: 438 DSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELL-KE 262
           + A +  SKL++ L     H+   + CL   L+    E+   Q+++   LAEQK  + K+
Sbjct: 608 EEAEAKASKLQDDL----GHARSEVACLQDTLNKLDAEYRDFQSVVQKELAEQKRAIEKQ 663

Query: 261 NEDL 250
            EDL
Sbjct: 664 REDL 667

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>MYOJ_DICDI (P54697) Myosin IJ heavy chain|
          Length = 2245

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 21/77 (27%), Positives = 37/77 (48%)
 Frame = -1

Query: 291  LAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEK 112
            L  ++E  K+   L + L               +S EKI +L+  +EE  DE   ++Q++
Sbjct: 1227 LGSEEEAKKQINQLELELTDHKSKLQIQLQLTEQSNEKIKKLKGKLEEYQDE-KKQLQQE 1285

Query: 111  REAIKQLSDTIDYHKNN 61
             E IKQ   +++  KN+
Sbjct: 1286 LERIKQSKQSVEDEKNS 1302



 Score = 28.5 bits (62), Expect = 7.6
 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
 Frame = -1

Query: 417  SKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGL 238
            SKL+ QL +L   S++ I  L  +L     E   LQ  L      ++ +  E   L   L
Sbjct: 1249 SKLQIQL-QLTEQSNEKIKKLKGKLEEYQDEKKQLQQELERIKQSKQSVEDEKNSLITQL 1307

Query: 237  RXXXXXXXXXXXSATESAEKIVRLEKIIEEKD---DELAARVQEKREAIKQLSDTIDYHK 67
                        + +   EKI  L+  IEE +    +L A  + K + I+++   ++  K
Sbjct: 1308 TTVKFESTQVSTNVSHQKEKITTLKSTIEELNKSIGKLQAEQKNKDDEIRKIQFELNDQK 1367

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>SBCC_CLOAB (Q97FK1) Nuclease sbcCD subunit C|
          Length = 1163

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
 Frame = -1

Query: 396 DELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXX 217
           DEL    ++ I     + +   GE    +N+  + L E++ELLKEN D            
Sbjct: 179 DELSFKLARKIRKEREKENVLVGELKGYENINEDVLKERRELLKENNDFFNEASKEYLKA 238

Query: 216 XXXXXSATE------SAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSD 55
                   E        E+  R+ K + EK DE+   ++EKR  + + S  +  + +N +
Sbjct: 239 EEEYNEGKEVWGLQIEIEEKNRVRKDLMEKKDEI--DLKEKRARLGESSSKVKPYIDNYE 296

Query: 54  DLVRYI 37
           + ++ I
Sbjct: 297 NTLKQI 302

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>EXO2_BPR69 (O64299) Exonuclease subunit 2 (EC 3.1.11.-) (Protein Gp46)|
           (Fragment)
          Length = 558

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
 Frame = -1

Query: 423 VVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAI 244
           +VSK+ ++L E  +HS + +TC  HR        SVL +       E +  +K  +DLA 
Sbjct: 297 IVSKITDKLHEC-NHSFEQLTC--HR-----DNLSVLVD-------EYRANVKTKQDLAS 341

Query: 243 GLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTI--DYH 70
            +R            A +    I +      +  DE+A   +E  + IK  SD +   YH
Sbjct: 342 DIRTKKQAMIATIDKAKKVKAAIEQASAEFIDHADEIALLQKELDKIIKTKSDIVLEKYH 401

Query: 69  KNNSDDLVR 43
           +    D+++
Sbjct: 402 RGIITDMLK 410

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>YAK1_SCHPO (Q09915) Hypothetical protein C1F7.01c in chromosome I|
          Length = 1365

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -1

Query: 192 ESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDDL 49
           E AE+ VR   I+E+++DE+   ++ K++  K    T D    + +DL
Sbjct: 62  EEAERQVREGFIVEDEEDEVPQEIRRKKKRKKHAESTADQDMLDEEDL 109

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>MYO2_SACKL (Q875Q8) Myosin-2 (Class V unconventional myosin MYO2) (Type V myosin|
            heavy chain MYO2) (Myosin V MYO2)
          Length = 1554

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
 Frame = -1

Query: 414  KLKNQLDELESHSSQSI------TCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENED 253
            KL+N++ +L    ++ +      T  I  L     E + ++ +L++   E  ++L++ +D
Sbjct: 935  KLENKVIQLTESLAEKVKENKGMTARIQELQQSLNESANIKELLNSQKDEHSKVLQQQKD 994

Query: 252  LAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEE----------KDDELAARVQEKREA 103
                                E  EK+V  +K +EE          K DEL A V+ K E 
Sbjct: 995  -------------AHDVQFNEVQEKLVNAKKEVEEAKEEIEQLIAKQDELKAEVRTKIEE 1041

Query: 102  IKQLSDTIDYHKNNSDDLVRYIRT 31
            + +   T    +  + DL   +++
Sbjct: 1042 LNKAKKTFTEFQTQNSDLKNEVKS 1065

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>ROSR_RHIET (Q52741) Transcriptional regulatory protein rosR (Nodulation|
           competitiveness determinant)
          Length = 143

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -1

Query: 432 AASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENED 253
           AA+VV K K  +   +S   + ITCL      CGG F  L+  L  + +   E  +E  D
Sbjct: 55  AAAVVEKQKPAVSVRKSVQDEQITCL-----ECGGNFKSLKRHLMTHHSLSPEEYREKWD 109

Query: 252 L 250
           L
Sbjct: 110 L 110

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>TPM2_BIOGL (P43689) Tropomyosin 2 (TMII)|
          Length = 284

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 19/84 (22%), Positives = 38/84 (45%)
 Frame = -1

Query: 327 EFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEE 148
           E  V+ N + +    ++E  +  +     +R            ATE+   + +L+K ++ 
Sbjct: 196 ELKVVGNNMKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKLQKEVDR 255

Query: 147 KDDELAARVQEKREAIKQLSDTID 76
            +DEL A    ++E  K +SD +D
Sbjct: 256 LEDELLA----EKERYKSISDELD 275

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>TPM_HALDV (Q9GZ71) Tropomyosin|
          Length = 284

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/84 (22%), Positives = 38/84 (45%)
 Frame = -1

Query: 327 EFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEE 148
           E  V+ N + +    ++E  +  +     +R            ATE+   + +L+K ++ 
Sbjct: 196 ELKVVGNNMKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKLQKEVDR 255

Query: 147 KDDELAARVQEKREAIKQLSDTID 76
            +DEL A    ++E  K +SD +D
Sbjct: 256 LEDELLA----EKEKYKAISDELD 275

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>TPM_CHLNI (O02389) Tropomyosin|
          Length = 284

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
 Frame = -1

Query: 438 DSAASVVSKLKNQLDELESH---SSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELL 268
           D AA  ++  +  L+  E+    +   +  L   L+  G     LQ  + N  A Q+E  
Sbjct: 163 DEAARKLAITEVDLERAETRLEAADAKVHELEEELTVVGANIKTLQ--VQNDQASQREDS 220

Query: 267 KENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLS 88
            E       +R            ATE+  ++ +L+K ++  +DEL A    ++E  K +S
Sbjct: 221 YEET-----IRDLSKNLKDAETRATEAERQLTKLQKEVDRLEDELLA----EKERYKAIS 271

Query: 87  DTID 76
           D +D
Sbjct: 272 DELD 275

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>LIPA_CAEEL (Q21049) Liprin-alpha (LAR-interacting protein alpha) (Synapse|
           defective protein 2)
          Length = 1139

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/89 (22%), Positives = 39/89 (43%)
 Frame = -1

Query: 372 QSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSAT 193
           + +  L   LS  G E S L+  +  Y AE +E +  N  +                 ++
Sbjct: 190 ERVATLEEELSTKGDENSSLKARIATYAAEAEEAMASNAPI-------------NGSISS 236

Query: 192 ESAEKIVRLEKIIEEKDDELAARVQEKRE 106
           ESA +++ +++ +E    ELA  +++  E
Sbjct: 237 ESANRLIEMQEALERMKTELANSLKQSTE 265

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>SYA_THEMA (Q9X1B6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 863

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -1

Query: 378 SSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXS 199
           S +S++  + R+ A  G FS L+      L  QK+L+ + +++ +G R            
Sbjct: 681 SEESVSSGVRRIEAVTG-FSALE-----LLRNQKKLIDQLKEI-LGARED---------- 723

Query: 198 ATESAEKIVRLEKIIEEKDDELA-ARVQEKREAIKQLSDTI 79
             E  ++++ L + ++E + +L+  R+ E+R A+KQL D +
Sbjct: 724 --ELTDRVLSLREKVKELEKKLSQGRISEERIAMKQLEDGV 762

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>RPGR1_BOVIN (Q9GLM3) X-linked retinitis pigmentosa GTPase regulator-interacting|
           protein 1 (RPGR-interacting protein 1)
          Length = 1221

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 27/135 (20%), Positives = 60/135 (44%)
 Frame = -1

Query: 426 SVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLA 247
           +++S++     EL+  S ++++     L +   + S+LQ  L  +    ++L KE + L 
Sbjct: 273 ALLSQVNELRAELKEESKKAVS-----LKSQMEDVSILQITLKEFQERVEDLEKERKLLN 327

Query: 246 IGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHK 67
                              S E   +L++ + +  D+L   ++EKRE + QLS     +K
Sbjct: 328 DNYDKLLESMLDSSNQPQWSHELGEQLQQKVSQLQDQLDVEMKEKREILLQLSQEKAQNK 387

Query: 66  NNSDDLVRYIRTHNR 22
           +   ++   ++ H +
Sbjct: 388 DLELEVTSLLQKHKQ 402

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>MYH10_HUMAN (P35580) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 28/128 (21%), Positives = 55/128 (42%)
 Frame = -1

Query: 432  AASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENED 253
            AAS+ S+L++  + L+  + Q +      LS+   +    +N L     E++E  K  E 
Sbjct: 1310 AASLESQLQDTQELLQEETRQKLN-----LSSRIRQLEEEKNSLQEQQEEEEEARKNLEK 1364

Query: 252  LAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDY 73
              + L+               + E +   +K + +  + L+ R++EK  A  +L  T + 
Sbjct: 1365 QVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKALAYDKLEKTKNR 1424

Query: 72   HKNNSDDL 49
             +   DDL
Sbjct: 1425 LQQELDDL 1432

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>MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)|
          Length = 1969

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/111 (18%), Positives = 47/111 (42%)
 Frame = -1

Query: 375  SQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSA 196
            +Q +  L  +L   G   + LQ ++     E++EL K  ++    L              
Sbjct: 1519 AQEVKDLTDQLGEGGRSVAELQKIVRKLEVEKEELQKALDEAEAALEAEEAKVLRAQIEV 1578

Query: 195  TESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDDLVR 43
            ++   +I   EK I+EK++E     +  + A++ +  T++      ++ +R
Sbjct: 1579 SQIRSEI---EKRIQEKEEEFENTRRNHQRALESMQATLEAETKQKEEALR 1626

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>Y328_MYCGE (Q49419) Hypothetical protein MG328|
          Length = 756

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 31/121 (25%), Positives = 52/121 (42%)
 Frame = -1

Query: 411 LKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRX 232
           LK Q+D+L+ +++  I  L   +       S  ++   +    Q +LL+EN DL   L+ 
Sbjct: 251 LKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQ- 309

Query: 231 XXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDD 52
                            K V +  + +E ++EL    QEK      LSD +D  KN S +
Sbjct: 310 ----------------NKPVAINPLSDEVNEELENLKQEKA----LLSDQLDALKNKSSN 349

Query: 51  L 49
           +
Sbjct: 350 V 350

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>AL2SB_RAT (Q6AY08) Amyotrophic lateral sclerosis 2 chromosomal region|
           candidate gene 12 protein homolog
          Length = 411

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 9/131 (6%)
 Frame = -1

Query: 408 KNQLDELESHSSQSI----TCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIG 241
           K QL++LE+   +++         +L   G E+  L+NM H Y   Q  +  E ED    
Sbjct: 182 KEQLEKLENSYKETLKVEKAAAQEKLDEMGKEYKYLKNMFHMY---QDSIYDEMED---- 234

Query: 240 LRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARV-----QEKREAIKQLSDTID 76
                        +  E  EK+ R EKI+ ++   +  +      +EKR+  +  S  ++
Sbjct: 235 -------KWSRRKAEWEKDEKMER-EKILLQQKHRITKKFELESEEEKRKMNESFSTVME 286

Query: 75  YHKNNSDDLVR 43
                 ++L+R
Sbjct: 287 NFTREKEELIR 297

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>GOGA1_HUMAN (Q92805) Golgin subfamily A member 1 (Golgin-97)|
          Length = 767

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
 Frame = -1

Query: 417 SKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGL 238
           S L  +L+EL+ H S       H +++  G  S +  +      +++EL    + L+I L
Sbjct: 224 SDLSQKLEELQRHYSTLEEQRDHVIASKTGAESKITALEQ----KEQELQALIQQLSIDL 279

Query: 237 RXXXXXXXXXXXSATESAEKIVRLEKIIEEK---DDELAARVQEKREAIKQLSDT 82
           +             T   EK+  LEK +E+    ++ +   ++EK  A + L DT
Sbjct: 280 QKVTAETQEKEDVITHLQEKVASLEKRLEQNLSGEEHVQELLKEKTLAEQNLEDT 334

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>TPM_HALRU (Q25145) Tropomyosin|
          Length = 284

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 19/84 (22%), Positives = 37/84 (44%)
 Frame = -1

Query: 327 EFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEE 148
           E  V+ N   +    ++E  +  +     +R            ATE+   + +L+K ++ 
Sbjct: 196 ELKVVGNNTKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKLQKEVDR 255

Query: 147 KDDELAARVQEKREAIKQLSDTID 76
            +DEL A    ++E  K +SD +D
Sbjct: 256 LEDELLA----EKEKYKAISDELD 275

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>RAD50_AQUAE (O67124) Probable DNA double-strand break repair rad50 ATPase|
          Length = 978

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -1

Query: 291 LAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEK 112
           L E KE+LKE   L+  L+              + +E++        EK  +L A  +EK
Sbjct: 345 LQEIKEILKELSQLSSSLKEKEREYEQAKQEFEDLSERV--------EKGKKLVAETEEK 396

Query: 111 REAIKQLSDTIDY 73
            E IK+L    +Y
Sbjct: 397 LEKIKELFSEEEY 409

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>NEK11_HUMAN (Q8NG66) Serine/threonine-protein kinase Nek11 (EC 2.7.11.1)|
           (NimA-related protein kinase 11) (Never in mitosis
           A-related kinase 11)
          Length = 645

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -1

Query: 183 EKIVRLEKIIEEKDDELAARVQEKREA-IKQLSDTIDYHKNN 61
           EK  +L+KI+EEK +E + R+QE R    +QLS  + + K +
Sbjct: 355 EKARKLKKIVEEKYEENSKRMQELRSRNFQQLSVDVLHEKTH 396

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>Y864_MYCCT (P43047) Hypothetical protein MCAP_0864 precursor (ORF R8)|
          Length = 470

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
 Frame = -1

Query: 426 SVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLH----NYLAEQKELLKEN 259
           S ++K+  Q+++LE+ S+Q+ T     +S    +   L         N    +KEL K+N
Sbjct: 316 SDITKINEQVNQLETQSNQTNT----NISLLRQQIQKLDKQKETSTLNTQTLEKELNKKN 371

Query: 258 EDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTI 79
            +L   ++             +E  +   +L++II++          +K E IKQL   +
Sbjct: 372 IELEKLIKESESYSTSIKKLESERTQLQTKLDEIIKQNT--------QKEELIKQLEKEL 423

Query: 78  D 76
           +
Sbjct: 424 E 424

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>M12_STRPY (P19401) M protein, serotype 12 precursor (Fragment)|
          Length = 564

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = -1

Query: 180 KIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDDLVRY 40
           KI  LEK +EEK+D L+   +E  EA K +    + H   + DL+R+
Sbjct: 127 KITELEKSVEEKNDVLSQIKKELEEAEKDIQFGREVH---AADLLRH 170

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>PCDC2_PANTR (Q5DRE1) Protocadherin alpha C2 precursor (PCDH-alpha-C2)|
          Length = 1007

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 392 SSNHTPAKALRASFTAYLLVVESLVSFRTCYTIILLSRKNCSRKT 258
           +  H  +    +  T YL++  S VSF    TII+LS   C R T
Sbjct: 691 TQRHVKSPRTYSEITLYLIIALSTVSFIFLLTIIILSIIKCYRYT 735

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>PCDC2_HUMAN (Q9Y5I4) Protocadherin alpha C2 precursor (PCDH-alpha-C2)|
          Length = 1007

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 392 SSNHTPAKALRASFTAYLLVVESLVSFRTCYTIILLSRKNCSRKT 258
           +  H  +    +  T YL++  S VSF    TII+LS   C R T
Sbjct: 691 TQRHVKSPRTYSEITLYLIIALSTVSFIFLLTIIILSIIKCYRYT 735

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>CNN_DROME (P54623) Centrosomin (Protein arrow)|
          Length = 1320

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -1

Query: 198  ATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDDL 49
            A +  E+  RL +   E+D       QE+ + + +L  ++DYH+ N  +L
Sbjct: 1030 AVQQLEEHERLHREALERDWVALTTYQEQAQQLLELQRSLDYHQENEKEL 1079

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>MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha isoform|
            (MyHC-alpha)
          Length = 1939

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
 Frame = -1

Query: 432  AASVVSKLKNQ------LDELESHSSQSITCLIHRLS-----ACGGEFSVLQNMLHNYLA 286
            AA +  +LK +      L+ ++ +  Q+I  L HRL      A  G    LQ +      
Sbjct: 1764 AAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRE 1823

Query: 285  EQKEL---LKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQE 115
             + EL    K N +   G+R              E  + +VRL+ ++++   ++ A  ++
Sbjct: 1824 LENELEAEQKRNAESVKGMRKSERRIKELTYQTEEDKKNLVRLQDLVDKLQLKVKAYKRQ 1883

Query: 114  KREAIKQLSDTIDYHKNNSDDL 49
              EA +Q +  +   +    +L
Sbjct: 1884 AEEAEEQANTNLSKFRKVQHEL 1905

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>IFA3_CAEEL (Q21065) Intermediate filament protein ifa-3 (Intermediate filament|
           protein A3) (IF-A3) (Cel IF A3)
          Length = 581

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 12/147 (8%)
 Frame = -1

Query: 438 DSAASVVSKLKNQLDELESHSSQS----------ITCLIHRLSACGGEFSVLQNMLHNYL 289
           + A   + K+K+QLDEL     ++          I  L+  LS    E ++L+  +    
Sbjct: 140 EEAEKEIGKIKDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEINLLKRRIALLE 199

Query: 288 AEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIE--EKDDELAARVQE 115
            E   L KEN  L   L+              ++  K+  + + I+  ++  E   +  +
Sbjct: 200 EEVARLKKENFRLTSELQRVRSELDQETLLRIDNQNKVTTILEEIDFMKRGFETELKDLQ 259

Query: 114 KREAIKQLSDTIDYHKNNSDDLVRYIR 34
            + A    S+  +Y KN   + +R IR
Sbjct: 260 AQAARDTTSENREYFKNELMNSIRDIR 286

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>ITPR_DROME (P29993) Inositol 1,4,5-trisphosphate receptor (InsP3 receptor)|
            (InsP3R)
          Length = 2838

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
 Frame = -1

Query: 177  IVRLEKIIEEKDDELAARV-QEKREAIKQLSDTIDYHKNNSDD------LVRYIRTHNRP 19
            I   EK++EEK++ +  +V +  RE +      ID +     D      L+RY +T + P
Sbjct: 1760 IKHTEKLLEEKEERMCVKVLRTLREMM-----AIDVNYGEKGDALRQTLLLRYFQTKSTP 1814

Query: 18   RLP 10
            RLP
Sbjct: 1815 RLP 1817

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>MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isoform|
            (MyHC-alpha)
          Length = 1938

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
 Frame = -1

Query: 432  AASVVSKLKNQ------LDELESHSSQSITCLIHRLS-----ACGGEFSVLQNMLHNYLA 286
            AA +  +LK +      L+ ++ +  Q+I  L HRL      A  G    LQ +      
Sbjct: 1763 AAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRE 1822

Query: 285  EQKEL---LKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQE 115
             + EL    K N +   G+R              E  + +VRL+ ++++   ++ A  ++
Sbjct: 1823 LENELEAEQKRNAESVKGMRKSERRIKELTYQTEEDKKNLVRLQDLVDKLQLKVKAYKRQ 1882

Query: 114  KREAIKQLSDTIDYHKNNSDDL 49
              EA +Q +  +   +    +L
Sbjct: 1883 AEEAEEQANTNLSKFRKVQHEL 1904

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>MYH11_CHICK (P10587) Myosin-11 (Myosin heavy chain, gizzard smooth muscle)|
          Length = 1978

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
 Frame = -1

Query: 414  KLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLA-------EQKELLKENE 256
            +L+  L  LE  +SQ    L  ++       S LQ  L +  A       ++++L +E E
Sbjct: 1096 ELQAALARLEDETSQKNNAL-KKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELE 1154

Query: 255  DLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKR----EAIKQLS 88
             L   L               +  +++  L++ +EE+     A+VQE R    +A+++L+
Sbjct: 1155 ALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAVEELT 1214

Query: 87   DTIDYHKNNSDDL 49
            + ++  K    +L
Sbjct: 1215 EQLEQFKRAKANL 1227

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>AL2S3_HUMAN (O60296) Amyotrophic lateral sclerosis 2 chromosomal region|
           candidate gene 3 protein (Trafficking protein,
           kinesin-binding 2)
          Length = 914

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = -1

Query: 324 FSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKII-EE 148
           FS+ Q +L   + ++K  LKE E+  + LR                    ++ E +  EE
Sbjct: 201 FSLSQGLLQLEMLQEK--LKELEEENMALRSKACH---------------IKTETVTYEE 243

Query: 147 KDDELAAR-VQEKREAIKQLSDTIDYHKNNSDDLVRY 40
           K+ +L +  V+E RE   Q+S   +     SD+L+RY
Sbjct: 244 KEQQLVSDCVKELRETNAQMSRMTEELSGKSDELIRY 280

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>LIP_STAEQ (Q5HKP6) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase)|
          Length = 688

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 14/128 (10%)
 Frame = -1

Query: 393 ELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKEN-------EDLAIGLR 235
           ELE H+S++   L  + +    +     + L N  A+Q++  KEN             L 
Sbjct: 137 ELEKHASENNQTLHSKAAQSNEDVKTKPSQLDNTTAQQEDSQKENLSKQDTQSSKTTDLL 196

Query: 234 XXXXXXXXXXXSATESAEKIVR--LEKIIEEKDDELAA--RVQEKREAI---KQLSDTID 76
                       +TE   K V+   +++  + DD+      +  K E +   KQ + T D
Sbjct: 197 RATGQNQSKDSQSTEEVNKEVKNDTQQVTAKNDDDKVETFNLNSKEEPLKVDKQANPTTD 256

Query: 75  YHKNNSDD 52
             K++ +D
Sbjct: 257 KDKSSKND 264

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>TPM1_BIOGL (P42636) Tropomyosin 1 (TMI) (Bg 39)|
          Length = 284

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -1

Query: 198 ATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTID 76
           ATE+   + +L+K ++  +DEL A    ++E  K +SD +D
Sbjct: 239 ATEAERTVSKLQKEVDRLEDELLA----EKERYKSISDELD 275

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>MUTS2_THETN (Q8R9D0) MutS2 protein|
          Length = 790

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = -1

Query: 306 MLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAA 127
           +L   L ++K  L+  +D    L+            A ++AE++++  K  EEK+     
Sbjct: 548 VLKEELEKEKRKLESQKDKI--LKEAKEKAREIIKEAKQTAEEVIKRIKEAEEKEKNKDR 605

Query: 126 RVQEKREAIKQ 94
            +QE RE IK+
Sbjct: 606 AIQEIREKIKK 616

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>IF3A_SCHPO (O74760) Probable eukaryotic translation initiation factor 3 110|
           kDa subunit (eIF3 p110) (Translation initiation factor
           eIF3, p110 subunit) (eIF3a)
          Length = 932

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -1

Query: 192 ESAEKIVRLEKIIEEKDDELAARVQEKREA 103
           E AEK+ R  +I +E+D+E++ ++ EK  A
Sbjct: 837 EMAEKLERQRRIQQERDEEISRKLAEKAAA 866

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>MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1959

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 30/125 (24%), Positives = 54/125 (43%)
 Frame = -1

Query: 432  AASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENED 253
            A +   KL+  L +LESH     T   +R  A       LQ  + +Y+ E ++     E+
Sbjct: 1608 AVAARKKLELDLKDLESHID---TANKNRDEAIK-HVRKLQAQMKDYMRELEDTRTSREE 1663

Query: 252  LAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDY 73
            +                 A E+ +K+  +E  + +  +ELAA  + KR+A ++  +  D 
Sbjct: 1664 IL--------------AQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADE 1709

Query: 72   HKNNS 58
              N+S
Sbjct: 1710 IANSS 1714

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>NEK11_MACFA (Q8WNU8) Serine/threonine-protein kinase Nek11 (EC 2.7.11.1)|
           (NimA-related protein kinase 11) (Never in mitosis
           A-related kinase 11)
          Length = 637

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -1

Query: 183 EKIVRLEKIIEEKDDELAARVQEKREA-IKQLSDTIDYHKNN 61
           E+  +L+KI+EEK +E + R+QE R    +QLS  + + K +
Sbjct: 355 ERARKLKKIVEEKYEENSKRMQELRSRNFQQLSVDVLHEKTH 396

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>MYH4_RABIT (Q28641) Myosin-4 (Myosin heavy chain, skeletal muscle, juvenile)|
          Length = 1938

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 29/141 (20%), Positives = 57/141 (40%), Gaps = 10/141 (7%)
 Frame = -1

Query: 435  SAASVVSKLKN----QLDELES------HSSQSITCLIHRLSACGGEFSVLQNMLHNYLA 286
            S ++ V K+KN     LD+LE+      +  Q I+ L  +++  G     L+ +      
Sbjct: 1479 SLSTEVFKVKNAYEESLDQLETLKRENKNLQQEISDLTEQIAEGGKRIHELEKVKKQVEQ 1538

Query: 285  EQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKRE 106
            E+ EL    E+    L               +   +I   ++ I EKD+E+    +    
Sbjct: 1539 EKSELQAALEEAEASLEHEEGKILRIQLELNQVKSEI---DRKIAEKDEEIDQLKRNHIR 1595

Query: 105  AIKQLSDTIDYHKNNSDDLVR 43
             ++ +  T+D    + +D +R
Sbjct: 1596 VVESMQSTLDAEIRSRNDAIR 1616

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>MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)|
          Length = 1875

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/31 (38%), Positives = 23/31 (74%)
 Frame = -1

Query: 159 IIEEKDDELAARVQEKREAIKQLSDTIDYHK 67
           ++++K++EL+  +QEK   IK LSD+++  K
Sbjct: 259 VLKQKNNELSKSLQEKLLEIKGLSDSLNSEK 289

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>RPOD_BORBU (P52323) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 631

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = -1

Query: 186 AEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDDLV 46
           AEK + +EK ++ K+D +  ++ E + A K+L     Y++  +D ++
Sbjct: 329 AEKKIEIEKSLKLKEDAIKEQITEAQLAQKELERIEMYYEYPTDKII 375

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>MYSC_CHICK (P29616) Myosin heavy chain, cardiac muscle isoform (Fragment)|
          Length = 1102

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 8/139 (5%)
 Frame = -1

Query: 435  SAASVVSKLKNQ----LDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELL 268
            S ++ + KLKN     LD LE+   ++   L   +S    + S     LH     +K++ 
Sbjct: 642  SLSTELFKLKNAYEETLDHLETLKRENKN-LQEEISDLTNQISEGNKNLHEIEKVKKQVE 700

Query: 267  KENEDLAIGLRXXXXXXXXXXXSATESAEKIVRL----EKIIEEKDDELAARVQEKREAI 100
            +E  ++ + L                   ++ +L    E+ + EKD+E+    + ++  I
Sbjct: 701  QEKSEVQLALEEAEGALEHEESKTLRFQLELSQLKADFERKLAEKDEEMQNIRRNQQRTI 760

Query: 99   KQLSDTIDYHKNNSDDLVR 43
              L  T+D    + ++ +R
Sbjct: 761  DSLQSTLDSEARSRNEAIR 779

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>MYH3_RAT (P12847) Myosin heavy chain, fast skeletal muscle, embryonic|
          Length = 1940

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
 Frame = -1

Query: 438  DSAASVVSKLKNQLDELESHSSQSITC---LIHRLSACGGEFSVLQNMLHNYLAEQKELL 268
            +S + + SKL+ Q+D+LES   Q       L        G+  + Q  + +   ++++L 
Sbjct: 1019 NSLSKLKSKLEQQVDDLESSLEQEKKLRVDLERNKRKLEGDLKLAQESILDLENDKQQLD 1078

Query: 267  KENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLS 88
            +  +                   + +  +KI  L+  IEE ++E+ A    + +  KQ S
Sbjct: 1079 ERLKKKDFEYSQLQSKVEDEQTLSLQLQKKIKELQARIEELEEEIEAERATRAKTEKQRS 1138

Query: 87   D 85
            D
Sbjct: 1139 D 1139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,687,501
Number of Sequences: 219361
Number of extensions: 616413
Number of successful extensions: 3017
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 2850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3006
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result