| Clone Name | rbaal25p24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 gatttgtgcgagcgtttctga 323 ||||||||||||||||||||| Sbjct: 61317 gatttgtgcgagcgtttctga 61337
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tgtcaaagaccttgttgatg 73 |||||||||||||||||||| Sbjct: 160810 tgtcaaagaccttgttgatg 160829
>gb|AC115484.2| Drosophila melanogaster clone BACR06K01, complete sequence Length = 168504 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 gcgctgctggaggcacctcctcct 229 ||||||||||||| |||||||||| Sbjct: 40958 gcgctgctggaggaacctcctcct 40981
>ref|XM_422352.1| PREDICTED: Gallus gallus similar to leucine rich repeat containing 5; leucine-rich repeat-containing 5 (LOC424513), mRNA Length = 2708 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 ggtccctgatgcagtcgttgatct 356 |||||||||||||||| ||||||| Sbjct: 1574 ggtccctgatgcagtctttgatct 1597
>gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosome 1, complete sequence Length = 224904 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 attacacatactgtcaaaga 62 |||||||||||||||||||| Sbjct: 198545 attacacatactgtcaaaga 198564
>gb|AC138208.11| Mus musculus chromosome 1, clone RP23-304E4, complete sequence Length = 166332 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 attacacatactgtcaaaga 62 |||||||||||||||||||| Sbjct: 81837 attacacatactgtcaaaga 81856
>gb|AC145897.3| Pan troglodytes BAC clone RP43-8K4 from 7, complete sequence Length = 153704 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tggaggcacctcctcctgct 232 |||||||||||||||||||| Sbjct: 140852 tggaggcacctcctcctgct 140833
>ref|XM_571309.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNF00450) partial mRNA Length = 2523 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tgtcaaagaccttgttgatg 73 |||||||||||||||||||| Sbjct: 26 tgtcaaagaccttgttgatg 45
>gb|AC122842.3| Mus musculus BAC clone RP23-148K14 from 1, complete sequence Length = 209506 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 attacacatactgtcaaaga 62 |||||||||||||||||||| Sbjct: 9943 attacacatactgtcaaaga 9962
>gb|AC064862.6| Homo sapiens BAC clone RP11-368M16 from 7, complete sequence Length = 175895 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cctcctcctgcttgtgcctg 240 |||||||||||||||||||| Sbjct: 120315 cctcctcctgcttgtgcctg 120296 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tggaggcacctcctcctgct 232 |||||||||||||||||||| Sbjct: 16791 tggaggcacctcctcctgct 16772
>emb|AL137222.17| Human DNA sequence from clone RP1-209B5 on chromosome 6 Contains the 5' end of the AKAP7 gene for A kinase (PRKA) anchor protein 7, a zinc finger pseudogene and a CpG island, complete sequence Length = 110724 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 gtggtcataagtttgagctgggac 282 ||||||||||||||||| |||||| Sbjct: 55268 gtggtcataagtttgagatgggac 55245
>emb|AL078587.18|HSDJ760C5 Human DNA sequence from clone RP4-760C5 on chromosome 20 Contains an exon for a protein similar to ABCC7 (ATP-binding cassette, sub-family C (CFTR/MRP),member 7), two novel genes and two CpG islands, complete sequence Length = 124489 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tggaggcacctcctcctgct 232 |||||||||||||||||||| Sbjct: 9767 tggaggcacctcctcctgct 9786
>gb|BC046445.1| Homo sapiens cDNA clone IMAGE:4838699 Length = 4963 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggtcataagtttgagctggg 280 |||||||||||||||||||| Sbjct: 3123 ggtcataagtttgagctggg 3104
>gb|AC158402.6| Mus musculus chromosome 1, clone RP24-328M23, complete sequence Length = 176270 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cattacacatactgtcaaag 61 |||||||||||||||||||| Sbjct: 132817 cattacacatactgtcaaag 132836
>gb|AC015845.8| Homo sapiens chromosome 17, clone RP11-343K8, complete sequence Length = 191957 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 ccattacacatactgtcaaagacc 64 ||||||||||||||| |||||||| Sbjct: 124149 ccattacacatactgccaaagacc 124172
>gb|AC067930.7| Homo sapiens chromosome 8, clone RP11-661A12, complete sequence Length = 174906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggtcataagtttgagctggg 280 |||||||||||||||||||| Sbjct: 119644 ggtcataagtttgagctggg 119625
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 tgcagtcgttgatctttccgttaa 365 |||||| ||||||||||||||||| Sbjct: 20899 tgcagtggttgatctttccgttaa 20876
>dbj|AB169642.1| Macaca fascicularis brain cDNA, clone: QccE-10634, similar to human pyruvate kinase, muscle (PKM2), transcript variant 3,mRNA, RefSeq: NM_182471.1 Length = 2389 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gaggccgagggggctggggaagca 133 |||||| ||||||||||||||||| Sbjct: 2204 gaggcccagggggctggggaagca 2181
>gb|AC134051.3| Homo sapiens chromosome 3 clone RP11-705F24, complete sequence Length = 85615 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 ctgggactgagctagctgctgcta 299 |||||||| ||||||||||||||| Sbjct: 78734 ctgggacttagctagctgctgcta 78711
>gb|AC092399.2| Drosophila melanogaster, chromosome 2L, region 36B-36C, BAC clone BACR31N11, complete sequence Length = 122013 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 gcgctgctggaggcacctcctcct 229 ||||||||||||| |||||||||| Sbjct: 16195 gcgctgctggaggaacctcctcct 16218
>emb|BX950782.1| Gallus gallus finished cDNA, clone ChEST719i8 Length = 1968 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 ggtccctgatgcagtcgttgatct 356 |||||||||||||||| ||||||| Sbjct: 1599 ggtccctgatgcagtctttgatct 1622
>gb|AC105210.10| Homo sapiens chromosome 8, clone RP11-118P12, complete sequence Length = 101777 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggtcataagtttgagctggg 280 |||||||||||||||||||| Sbjct: 12084 ggtcataagtttgagctggg 12065
>gb|AC136371.4| Mus musculus chromosome 1, clone RP23-405G16, complete sequence Length = 225976 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 attacacatactgtcaaaga 62 |||||||||||||||||||| Sbjct: 84942 attacacatactgtcaaaga 84961
>gb|AE003648.2| Drosophila melanogaster chromosome 2L, section 57 of 83 of the complete sequence Length = 284900 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 gcgctgctggaggcacctcctcct 229 ||||||||||||| |||||||||| Sbjct: 266492 gcgctgctggaggaacctcctcct 266515
>gb|AC140938.1| Gallus gallus BAC clone TAM32-30F4 from chromosome ul, complete sequence Length = 122857 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 ggtccctgatgcagtcgttgatct 356 |||||||||||||||| ||||||| Sbjct: 71839 ggtccctgatgcagtctttgatct 71816
>emb|AL929572.10| Mouse DNA sequence from clone RP23-464H12 on chromosome 2, complete sequence Length = 191603 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tgcttgtgcctggtactgat 248 |||||||||||||||||||| Sbjct: 81611 tgcttgtgcctggtactgat 81592
>emb|AL833379.1|HSM804692 Homo sapiens mRNA; cDNA DKFZp667K1314 (from clone DKFZp667K1314) Length = 3797 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ggtcataagtttgagctggg 280 |||||||||||||||||||| Sbjct: 2772 ggtcataagtttgagctggg 2791 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,695,342 Number of Sequences: 3902068 Number of extensions: 3695342 Number of successful extensions: 67440 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67386 Number of HSP's gapped (non-prelim): 54 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)