ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal26e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X78878.1|HVACXPII2 Hordeum vulgare L. (Alexis) mRNA for seri... 1128 0.0
2dbj|AK067247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 418 e-114
3dbj|AK066243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 418 e-114
4gb|AY108129.1| Zea mays PCO069672 mRNA sequence 341 2e-90
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
6dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
7dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
8gb|AC136138.30| Medicago truncatula clone mth2-8f9, complete seq... 64 6e-07
9gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete seq... 58 4e-05
10ref|NM_119227.2| Arabidopsis thaliana SCPL29; catalytic/ serine ... 50 0.009
11gb|BT013423.1| Lycopersicon esculentum clone 132062R, mRNA sequence 50 0.009
12gb|AY133774.1| Arabidopsis thaliana clone U10970 putative serine... 50 0.009
13gb|AY050958.1| Arabidopsis thaliana putative serine carboxypepti... 50 0.009
14emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, ... 50 0.009
15emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BA... 50 0.009
16emb|BX827133.1|CNS0A2TC Arabidopsis thaliana Full-length cDNA Co... 50 0.009
17emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, B... 50 0.009
18ref|NM_115512.1| Arabidopsis thaliana catalytic/ serine carboxyp... 44 0.53
19emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BA... 44 0.53
20ref|NM_102919.2| Arabidopsis thaliana cationic amino acid transp... 42 2.1
21ref|XM_550207.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.1
22gb|AC105937.2| Homo sapiens chromosome 3 clone RP11-45J19, compl... 42 2.1
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
24gb|AC079041.4|AC079041 Arabidopsis thaliana chromosome 1 BAC F5M... 42 2.1
25gb|AC009948.3| Homo sapiens BAC clone RP11-65L3 from 2, complete... 42 2.1
26dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
27dbj|AK071183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
28gb|AY111652.1| Zea mays CL33342_1 mRNA sequence 42 2.1
29dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
30ref|XM_415041.1| PREDICTED: Gallus gallus similar to CDC42-bindi... 40 8.2
31gb|BC038001.1| Mus musculus RIKEN cDNA 4732473B16 gene, mRNA (cD... 40 8.2
32ref|NM_146252.1| Mus musculus TBC1 domain family, member 13 (Tbc... 40 8.2
33gb|BC039215.1| Mus musculus TBC1 domain family, member 13, mRNA ... 40 8.2
34gb|AC091519.16| Mus musculus strain 129/SvJ chromosome 2 clone m... 40 8.2
35emb|AL356600.13| Human DNA sequence from clone RP5-974J14 on chr... 40 8.2
36emb|AL845258.5| Mouse DNA sequence from clone RP23-315H12 on chr... 40 8.2
37gb|BC025586.1| Mus musculus TBC1 domain family, member 13, mRNA ... 40 8.2
38dbj|AK133266.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.2
39dbj|AK135706.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 8.2
40dbj|AK137659.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 8.2
41dbj|AK158066.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 8.2
42dbj|AK162145.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 8.2
43gb|DQ393819.1| Melampsora lini microsatellite Ml-22 sequence 40 8.2
44dbj|AK163215.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 8.2
45dbj|AK028944.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 8.2
46dbj|AK011204.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 8.2
47gb|DQ144809.1| Asellus aquaticus isolate Pu5 cytochrome oxidase ... 40 8.2
48ref|NM_175307.2| Mus musculus RIKEN cDNA 4732473B16 gene (473247... 40 8.2
49gb|AF269992.1|AF269992 Staphylococcus epidermidis strain SR1 clo... 40 8.2
50gb|AF269813.1|AF269813 Staphylococcus epidermidis strain SR1 clo... 40 8.2
51gb|AF269788.1|AF269788 Staphylococcus epidermidis strain SR1 clo... 40 8.2
52gb|AC125090.3| Mus musculus BAC clone RP24-162F23 from chromosom... 40 8.2
53dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
54gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 40 8.2
55gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 40 8.2
56emb|CT025673.8| Mouse DNA sequence from clone RP24-286H7 on chro... 40 8.2
57emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on ch... 40 8.2 
>emb|X78878.1|HVACXPII2 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-2
          Length = 1580

 Score = 1128 bits (569), Expect = 0.0
 Identities = 585/589 (99%), Gaps = 1/589 (0%)
 Strand = Plus / Minus

                                                                        
Query: 17   gcggcaggaaaactgtttccctgtct-aggggattaattggtgccaatagcacttacaaa 75
            |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 1496 gcggcaggaaaactgtttccctgtctcacgggattaattggtgccaatagcacttacaaa 1437

                                                                        
Query: 76   tggcaacagctatggccatccttatattgtggaagtacgtgtggagttttaacaaccgaa 135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 tggcaacagctatggccatccttatattgtggaagtacgtgtggagttttaacaaccgaa 1377

                                                                        
Query: 136  ctgccttggtgagctggaatcttgtggtgctggtcgtgtccgaaaccaaatgtgtccggc 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 ctgccttggtgagctggaatcttgtggtgctggtcgtgtccgaaaccaaatgtgtccggc 1317

                                                                        
Query: 196  atattacatatcgctgcgtagatcagacagcacaggcattgggctcccggccaagaatga 255
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1316 atattacatatcgctgcgtagatcagacagcacaggcattggcctcccggccaagaatga 1257

                                                                        
Query: 256  tttgatgagcgtaagagcctgcttgggacgatggagaggaacctcatgacctgcacccct 315
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1256 tttgatgagcgtaagagcctgcttgggacgatggagaggaacctcatgacccgcacccct 1197

                                                                        
Query: 316  tactgtcacaaagttgagacccttgtacccttgggtccaaccaccaacctcgccatcatc 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 tactgtcacaaagttgagacccttgtacccttgggtccaaccaccaacctcgccatcatc 1137

                                                                        
Query: 376  atcataccaagcatgccacggggtcactgttggaagcttgagagcatcaatgctgtatct 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 atcataccaagcatgccacggggtcactgttggaagcttgagagcatcaatgctgtatct 1077

                                                                        
Query: 436  agttgatgttactggaatcactgcatctgtgtctccactgaacatccatatacgaagccc 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 agttgatgttactggaatcactgcatctgtgtctccactgaacatccatatacgaagccc 1017

                                                                        
Query: 496  atactgaataagttcatgatagatatgcaatacagatctttcacagtccttccagttggt 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 atactgaataagttcatgatagatatgcaatacagatctttcacagtccttccagttggt 957

                                                             
Query: 556  gttaataacttcactgcaggtctcccatttggatttgccaatgaccgga 604
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  gttaataacttcactgcaggtctcccatttggatttgccaatgaccgga 908
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>dbj|AK067247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098N22, full
            insert sequence
          Length = 1796

 Score =  418 bits (211), Expect = e-114
 Identities = 325/363 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  ggcattgggctcccggccaagaatgatttgatgagcgtaagagcctgcttgggacgatgg 289
            |||||||||||||| ||||||||||||||||||||  | |||||||| ||||| | ||| 
Sbjct: 1465 ggcattgggctcccagccaagaatgatttgatgagaattagagcctgtttgggcctatgc 1406

                                                                        
Query: 290  agaggaacctcatgacctgcaccccttactgtcacaaagttgagacccttgtacccttgg 349
            |||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| 
Sbjct: 1405 agaggaacctcatgacctgcgcccctcacagtcacgaagttgagtcccttgtacccttga 1346

                                                                        
Query: 350  gtccaaccaccaacctcgccatcatcatcataccaagcatgccacggggtcactgttgga 409
            ||||| ||||||||||| |||||||| ||||||||||||| ||| ||||| || ||||||
Sbjct: 1345 gtccagccaccaacctcaccatcatcgtcataccaagcattccaaggggttaccgttgga 1286

                                                                        
Query: 410  agcttgagagcatcaatgctgtatctagttgatgttactggaatcactgcatctgtgtct 469
            || ||||| ||||  |||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 1285 agtttgagggcattgatgctgtatctagttgatgttactggaagcactgcatctgtatct 1226

                                                                        
Query: 470  ccactgaacatccatatacgaagcccatactgaataagttcatgatagatatgcaataca 529
            |||||||||| |||||||||||| |||||||| ||||||||||||||||||||||  |||
Sbjct: 1225 ccactgaacacccatatacgaagaccatactgtataagttcatgatagatatgcagcaca 1166

                                                                        
Query: 530  gatctttcacagtccttccagttggtgttaataacttcactgcaggtctcccatttggat 589
            |||||||| |||||||||||||| ||||||| ||| ||||||||||| |||||||| |||
Sbjct: 1165 gatctttcgcagtccttccagttagtgttaacaacatcactgcaggtttcccatttagat 1106

               
Query: 590  ttg 592
            |||
Sbjct: 1105 ttg 1103
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>dbj|AK066243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J23, full
            insert sequence
          Length = 1798

 Score =  418 bits (211), Expect = e-114
 Identities = 325/363 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  ggcattgggctcccggccaagaatgatttgatgagcgtaagagcctgcttgggacgatgg 289
            |||||||||||||| ||||||||||||||||||||  | |||||||| ||||| | ||| 
Sbjct: 1464 ggcattgggctcccagccaagaatgatttgatgagaattagagcctgtttgggcctatgc 1405

                                                                        
Query: 290  agaggaacctcatgacctgcaccccttactgtcacaaagttgagacccttgtacccttgg 349
            |||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| 
Sbjct: 1404 agaggaacctcatgacctgcgcccctcacagtcacgaagttgagtcccttgtacccttga 1345

                                                                        
Query: 350  gtccaaccaccaacctcgccatcatcatcataccaagcatgccacggggtcactgttgga 409
            ||||| ||||||||||| |||||||| ||||||||||||| ||| ||||| || ||||||
Sbjct: 1344 gtccagccaccaacctcaccatcatcgtcataccaagcattccaaggggttaccgttgga 1285

                                                                        
Query: 410  agcttgagagcatcaatgctgtatctagttgatgttactggaatcactgcatctgtgtct 469
            || ||||| ||||  |||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 1284 agtttgagggcattgatgctgtatctagttgatgttactggaagcactgcatctgtatct 1225

                                                                        
Query: 470  ccactgaacatccatatacgaagcccatactgaataagttcatgatagatatgcaataca 529
            |||||||||| |||||||||||| |||||||| ||||||||||||||||||||||  |||
Sbjct: 1224 ccactgaacacccatatacgaagaccatactgtataagttcatgatagatatgcagcaca 1165

                                                                        
Query: 530  gatctttcacagtccttccagttggtgttaataacttcactgcaggtctcccatttggat 589
            |||||||| |||||||||||||| ||||||| ||| ||||||||||| |||||||| |||
Sbjct: 1164 gatctttcgcagtccttccagttagtgttaacaacatcactgcaggtttcccatttagat 1105

               
Query: 590  ttg 592
            |||
Sbjct: 1104 ttg 1102
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>gb|AY108129.1| Zea mays PCO069672 mRNA sequence
          Length = 984

 Score =  341 bits (172), Expect = 2e-90
 Identities = 325/376 (86%)
 Strand = Plus / Minus

                                                                       
Query: 225 gcacaggcattgggctcccggccaagaatgatttgatgagcgtaagagcctgcttgggac 284
           ||||||||||||||||||| | |||||| |||||||| ||||| || ||||| ||||| |
Sbjct: 632 gcacaggcattgggctcccagtcaagaacgatttgattagcgtgagggcctgtttgggtc 573

                                                                       
Query: 285 gatggagaggaacctcatgacctgcaccccttactgtcacaaagttgagacccttgtacc 344
           |||| ||||| || || |||||||| ||||| || |||||||| ||||| ||| ||||||
Sbjct: 572 gatgaagagggacttcgtgacctgctcccctcacggtcacaaaattgagtcccctgtacc 513

                                                                       
Query: 345 cttgggtccaaccaccaacctcgccatcatcatcataccaagcatgccacggggtcactg 404
           |||||||||| ||||| ||||| || ||||| || |||||||||||||| || || | ||
Sbjct: 512 cttgggtccatccaccgacctcaccgtcatcgtcgtaccaagcatgccatggagttattg 453

                                                                       
Query: 405 ttggaagcttgagagcatcaatgctgtatctagttgatgttactggaatcactgcatctg 464
           ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||
Sbjct: 452 ttggaagcttgagagcatcgatgctgtatctagttgaagtcactggaatcactgcatctg 393

                                                                       
Query: 465 tgtctccactgaacatccatatacgaagcccatactgaataagttcatgatagatatgca 524
           | ||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 392 tatctccactgaacacccatatacggaggccatactgtataagttcatgatagatatgca 333

                                                                       
Query: 525 atacagatctttcacagtccttccagttggtgttaataacttcactgcaggtctcccatt 584
             ||||||||||| || |||  ||| |  || |||| | |||||||||| ||||||||||
Sbjct: 332 gcacagatctttcgcaatccccccaatgagtattaacagcttcactgcaagtctcccatt 273

                           
Query: 585 tggatttgccaatgac 600
           | ||||| ||||||||
Sbjct: 272 ttgattttccaatgac 257
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  151 bits (76), Expect = 3e-33
 Identities = 121/136 (88%)
 Strand = Plus / Plus

                                                                           
Query: 230     ggcattgggctcccggccaagaatgatttgatgagcgtaagagcctgcttgggacgatgg 289
               |||||||||||||| ||||||||||||||||||||  | |||||||| ||||| | ||| 
Sbjct: 4358309 ggcattgggctcccagccaagaatgatttgatgagaattagagcctgtttgggcctatgc 4358368

                                                                           
Query: 290     agaggaacctcatgacctgcaccccttactgtcacaaagttgagacccttgtacccttgg 349
               |||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| 
Sbjct: 4358369 agaggaacctcatgacctgcgcccctcacagtcacgaagttgagtcccttgtacccttga 4358428

                               
Query: 350     gtccaaccaccaacct 365
               ||||| ||||||||||
Sbjct: 4358429 gtccagccaccaacct 4358444



 Score =  131 bits (66), Expect = 3e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                           
Query: 362     acctcgccatcatcatcataccaagcatgccacggggtcactgttggaagcttgagagca 421
               ||||| |||||||| ||||||||||||| ||| ||||| || |||||||| ||||| |||
Sbjct: 4358833 acctcaccatcatcgtcataccaagcattccaaggggttaccgttggaagtttgagggca 4358892

                                                                     
Query: 422     tcaatgctgtatctagttgatgttactggaatcactgcatctgtgtctccactg 475
               |  |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 4358893 ttgatgctgtatctagttgatgttactggaagcactgcatctgtatctccactg 4358946



 Score =  129 bits (65), Expect = 1e-26
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                           
Query: 473     ctgaacatccatatacgaagcccatactgaataagttcatgatagatatgcaatacagat 532
               ||||||| |||||||||||| |||||||| ||||||||||||||||||||||  ||||||
Sbjct: 4359236 ctgaacacccatatacgaagaccatactgtataagttcatgatagatatgcagcacagat 4359295

                                                        
Query: 533     ctttcacagtccttccagttggtgttaataacttcactgca 573
               ||||| |||||||||||||| ||||||| ||| ||||||||
Sbjct: 4359296 ctttcgcagtccttccagttagtgttaacaacatcactgca 4359336
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>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0470C02
          Length = 158849

 Score =  151 bits (76), Expect = 3e-33
 Identities = 121/136 (88%)
 Strand = Plus / Plus

                                                                        
Query: 230  ggcattgggctcccggccaagaatgatttgatgagcgtaagagcctgcttgggacgatgg 289
            |||||||||||||| ||||||||||||||||||||  | |||||||| ||||| | ||| 
Sbjct: 5990 ggcattgggctcccagccaagaatgatttgatgagaattagagcctgtttgggcctatgc 6049

                                                                        
Query: 290  agaggaacctcatgacctgcaccccttactgtcacaaagttgagacccttgtacccttgg 349
            |||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| 
Sbjct: 6050 agaggaacctcatgacctgcgcccctcacagtcacgaagttgagtcccttgtacccttga 6109

                            
Query: 350  gtccaaccaccaacct 365
            ||||| ||||||||||
Sbjct: 6110 gtccagccaccaacct 6125



 Score =  131 bits (66), Expect = 3e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                        
Query: 362  acctcgccatcatcatcataccaagcatgccacggggtcactgttggaagcttgagagca 421
            ||||| |||||||| ||||||||||||| ||| ||||| || |||||||| ||||| |||
Sbjct: 6514 acctcaccatcatcgtcataccaagcattccaaggggttaccgttggaagtttgagggca 6573

                                                                  
Query: 422  tcaatgctgtatctagttgatgttactggaatcactgcatctgtgtctccactg 475
            |  |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 6574 ttgatgctgtatctagttgatgttactggaagcactgcatctgtatctccactg 6627



 Score =  129 bits (65), Expect = 1e-26
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                        
Query: 473  ctgaacatccatatacgaagcccatactgaataagttcatgatagatatgcaatacagat 532
            ||||||| |||||||||||| |||||||| ||||||||||||||||||||||  ||||||
Sbjct: 6917 ctgaacacccatatacgaagaccatactgtataagttcatgatagatatgcagcacagat 6976

                                                     
Query: 533  ctttcacagtccttccagttggtgttaataacttcactgca 573
            ||||| |||||||||||||| ||||||| ||| ||||||||
Sbjct: 6977 ctttcgcagtccttccagttagtgttaacaacatcactgca 7017
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>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0568D10
          Length = 63101

 Score =  151 bits (76), Expect = 3e-33
 Identities = 121/136 (88%)
 Strand = Plus / Plus

                                                                         
Query: 230   ggcattgggctcccggccaagaatgatttgatgagcgtaagagcctgcttgggacgatgg 289
             |||||||||||||| ||||||||||||||||||||  | |||||||| ||||| | ||| 
Sbjct: 49889 ggcattgggctcccagccaagaatgatttgatgagaattagagcctgtttgggcctatgc 49948

                                                                         
Query: 290   agaggaacctcatgacctgcaccccttactgtcacaaagttgagacccttgtacccttgg 349
             |||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| 
Sbjct: 49949 agaggaacctcatgacctgcgcccctcacagtcacgaagttgagtcccttgtacccttga 50008

                             
Query: 350   gtccaaccaccaacct 365
             ||||| ||||||||||
Sbjct: 50009 gtccagccaccaacct 50024



 Score =  131 bits (66), Expect = 3e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                         
Query: 362   acctcgccatcatcatcataccaagcatgccacggggtcactgttggaagcttgagagca 421
             ||||| |||||||| ||||||||||||| ||| ||||| || |||||||| ||||| |||
Sbjct: 50413 acctcaccatcatcgtcataccaagcattccaaggggttaccgttggaagtttgagggca 50472

                                                                   
Query: 422   tcaatgctgtatctagttgatgttactggaatcactgcatctgtgtctccactg 475
             |  |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 50473 ttgatgctgtatctagttgatgttactggaagcactgcatctgtatctccactg 50526



 Score =  129 bits (65), Expect = 1e-26
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                         
Query: 473   ctgaacatccatatacgaagcccatactgaataagttcatgatagatatgcaatacagat 532
             ||||||| |||||||||||| |||||||| ||||||||||||||||||||||  ||||||
Sbjct: 50816 ctgaacacccatatacgaagaccatactgtataagttcatgatagatatgcagcacagat 50875

                                                      
Query: 533   ctttcacagtccttccagttggtgttaataacttcactgca 573
             ||||| |||||||||||||| ||||||| ||| ||||||||
Sbjct: 50876 ctttcgcagtccttccagttagtgttaacaacatcactgca 50916
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>gb|AC136138.30| Medicago truncatula clone mth2-8f9, complete sequence
          Length = 128267

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 372   catcatcataccaagcatgccacggggtcactgttggaagcttgagagcatc 423
             ||||||||||||| ||| |||| ||| |||| ||||||||||||||||||||
Sbjct: 97932 catcatcataccatgcacgccaggggctcacagttggaagcttgagagcatc 97881
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>gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete sequence
          Length = 134155

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                               
Query: 374    tcatcataccaagcatgccacggggtcactgttggaagcttgagagcat 422
              ||||||||||| ||| |||| ||| |||| |||||||||||||||||||
Sbjct: 110687 tcatcataccatgcacgccaagggctcacggttggaagcttgagagcat 110639



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 372   catcatcataccaagcatgccacggggtcactgttggaagcttgagagcat 422
             ||||||||||||| ||| |||| ||| |||  |||||||||||||||||||
Sbjct: 96847 catcatcataccatgcacgccaggggctcaaagttggaagcttgagagcat 96797



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 372    catcatcataccaagcatgccacggggtcactgttggaagcttgagagcat 422
              |||| |||||||| ||| |||| ||| |||| ||||||||||| |||||||
Sbjct: 104695 catcgtcataccatgcacgccatgggctcacagttggaagcttaagagcat 104645
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>ref|NM_119227.2| Arabidopsis thaliana SCPL29; catalytic/ serine carboxypeptidase
            AT4G30810 (SCPL29) mRNA, complete cds
          Length = 1657

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 292  aggaacctcatgacctgcaccccttactgtcacaaagttgagacc 336
            |||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 1346 aggaacttcatggcctgcacctctcactgtcacaaagttcagacc 1302



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 437  gttgatgttactggaatcactgcatctgtgtctccactgaacatccatatacgaagccca 496
            |||||||| ||||| |  || ||||||| ||| |||||||| | ||| ||||||||||||
Sbjct: 1204 gttgatgtgactggtacaacggcatctgcgtccccactgaaaacccagatacgaagccca 1145
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>gb|BT013423.1| Lycopersicon esculentum clone 132062R, mRNA sequence
          Length = 1627

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 416  agagcatcaatgctgtatctagttgatgttactggaatcactgcatctgtgtctccactg 475
            |||||||  |||||||| |  |||||||| || || ||||| ||||||||||| ||||||
Sbjct: 1265 agagcatttatgctgtaacgggttgatgtaacggggatcacagcatctgtgtcaccactg 1206

                             
Query: 476  aacatccatatacgaag 492
            || | ||| ||||||||
Sbjct: 1205 aaaacccaaatacgaag 1189
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>gb|AY133774.1| Arabidopsis thaliana clone U10970 putative serine carboxypeptidase II
            (At4g30810) mRNA, complete cds
          Length = 1471

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 292  aggaacctcatgacctgcaccccttactgtcacaaagttgagacc 336
            |||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 1323 aggaacttcatggcctgcacctctcactgtcacaaagttcagacc 1279



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 437  gttgatgttactggaatcactgcatctgtgtctccactgaacatccatatacgaagccca 496
            |||||||| ||||| |  || ||||||| ||| |||||||| | ||| ||||||||||||
Sbjct: 1181 gttgatgtgactggtacaacggcatctgcgtccccactgaaaacccagatacgaagccca 1122
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>gb|AY050958.1| Arabidopsis thaliana putative serine carboxypeptidase II (At4g30810)
            mRNA, complete cds
          Length = 1672

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 292  aggaacctcatgacctgcaccccttactgtcacaaagttgagacc 336
            |||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 1346 aggaacttcatggcctgcacctctcactgtcacaaagttcagacc 1302



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 437  gttgatgttactggaatcactgcatctgtgtctccactgaacatccatatacgaagccca 496
            |||||||| ||||| |  || ||||||| ||| |||||||| | ||| ||||||||||||
Sbjct: 1204 gttgatgtgactggtacaacggcatctgcgtccccactgaaaacccagatacgaagccca 1145
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>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73
          Length = 194862

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                           
Query: 292    aggaacctcatgacctgcaccccttactgtcacaaagttgagacc 336
              |||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 151626 aggaacttcatggcctgcacctctcactgtcacaaagttcagacc 151582
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>emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I18 (ESSA project)
          Length = 122322

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 292    aggaacctcatgacctgcaccccttactgtcacaaagttgagacc 336
              |||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 116207 aggaacttcatggcctgcacctctcactgtcacaaagttcagacc 116251
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>emb|BX827133.1|CNS0A2TC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS12ZH06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1591

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 292  aggaacctcatgacctgcaccccttactgtcacaaagttgagacc 336
            |||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 1314 aggaacttcatggcctgcacctctcactgtcacaaagttcagacc 1270



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 437  gttgatgttactggaatcactgcatctgtgtctccactgaacatccatatacgaagccca 496
            |||||||| ||||| |  || ||||||| ||| |||||||| | ||| ||||||||||||
Sbjct: 1172 gttgatgtgactggtacaacggcatctgcgtccccactgaaaacccagatacgaagccca 1113
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>emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, BAC clone T10C21
          Length = 77860

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 292   aggaacctcatgacctgcaccccttactgtcacaaagttgagacc 336
             |||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 50511 aggaacttcatggcctgcacctctcactgtcacaaagttcagacc 50467
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>ref|NM_115512.1| Arabidopsis thaliana catalytic/ serine carboxypeptidase AT3G56540
           mRNA, complete cds
          Length = 795

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 451 aatcactgcatctgtgtctccactgaacat 480
           |||||| ||||| |||||||||||||||||
Sbjct: 721 aatcaccgcatccgtgtctccactgaacat 692
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>emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19
          Length = 101539

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 451   aatcactgcatctgtgtctccactgaacat 480
             |||||| ||||| |||||||||||||||||
Sbjct: 62612 aatcaccgcatccgtgtctccactgaacat 62583
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>ref|NM_102919.2| Arabidopsis thaliana cationic amino acid transporter AT1G31820
           mRNA, complete cds
          Length = 1716

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 356 ccaccaacctcgccatcatcatcat 380
           |||||||| ||||||||||||||||
Sbjct: 98  ccaccaacatcgccatcatcatcat 74
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>ref|XM_550207.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1750

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 281  ggacgatggagaggaacctcatgacctgc 309
            ||||||||||||||||| ||||| |||||
Sbjct: 1412 ggacgatggagaggaacttcatgccctgc 1384
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>gb|AC105937.2| Homo sapiens chromosome 3 clone RP11-45J19, complete sequence
          Length = 171621

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 225    gcacaggcattgggctcccgg 245
              |||||||||||||||||||||
Sbjct: 137910 gcacaggcattgggctcccgg 137930
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 281     ggacgatggagaggaacctcatgacctgc 309
               ||||||||||||||||| ||||| |||||
Sbjct: 3055860 ggacgatggagaggaacttcatgccctgc 3055832



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 555     tgttaataacttcactgcag 574
               ||||||||||||||||||||
Sbjct: 2403764 tgttaataacttcactgcag 2403783
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>gb|AC079041.4|AC079041 Arabidopsis thaliana chromosome 1 BAC F5M6 genomic sequence, complete
             sequence
          Length = 119420

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 356   ccaccaacctcgccatcatcatcat 380
             |||||||| ||||||||||||||||
Sbjct: 71071 ccaccaacatcgccatcatcatcat 71047
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>gb|AC009948.3| Homo sapiens BAC clone RP11-65L3 from 2, complete sequence
          Length = 172828

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 225   gcacaggcattgggctcccgg 245
             |||||||||||||||||||||
Sbjct: 57917 gcacaggcattgggctcccgg 57937
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>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0011G08
          Length = 139490

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 281    ggacgatggagaggaacctcatgacctgc 309
              ||||||||||||||||| ||||| |||||
Sbjct: 137377 ggacgatggagaggaacttcatgccctgc 137349
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>dbj|AK071183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P08, full
            insert sequence
          Length = 1750

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 281  ggacgatggagaggaacctcatgacctgc 309
            ||||||||||||||||| ||||| |||||
Sbjct: 1412 ggacgatggagaggaacttcatgccctgc 1384
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>gb|AY111652.1| Zea mays CL33342_1 mRNA sequence
          Length = 1026

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 403 tgttggaagcttgagagcatc 423
           |||||||||||||||||||||
Sbjct: 403 tgttggaagcttgagagcatc 423
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>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 281   ggacgatggagaggaacctcatgacctgc 309
             ||||||||||||||||| ||||| |||||
Sbjct: 23900 ggacgatggagaggaacttcatgccctgc 23872
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>ref|XM_415041.1| PREDICTED: Gallus gallus similar to CDC42-binding protein kinase
            alpha isoform B; ser-thr protein kinase related to the
            myotonic dystrophy protein kinase; ser-thr protein kinase
            PK428; myotonic dystrophy kinase-related CDC42-binding
            protein kinase alpha; CDC42 binidng prot... (LOC416746),
            mRNA
          Length = 6411

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   gcaggaaaactgtttccctg 39
            ||||||||||||||||||||
Sbjct: 6056 gcaggaaaactgtttccctg 6075
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>gb|BC038001.1| Mus musculus RIKEN cDNA 4732473B16 gene, mRNA (cDNA clone MGC:47481
           IMAGE:4913445), complete cds
          Length = 2330

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 actgccttggtgagctggaa 154
           ||||||||||||||||||||
Sbjct: 562 actgccttggtgagctggaa 543
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>ref|NM_146252.1| Mus musculus TBC1 domain family, member 13 (Tbc1d13), mRNA
          Length = 3513

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  tactggaatcactgcatctg 464
            ||||||||||||||||||||
Sbjct: 3238 tactggaatcactgcatctg 3257
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>gb|BC039215.1| Mus musculus TBC1 domain family, member 13, mRNA (cDNA clone
            IMAGE:4192353), with apparent retained intron
          Length = 3075

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  tactggaatcactgcatctg 464
            ||||||||||||||||||||
Sbjct: 2801 tactggaatcactgcatctg 2820
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>gb|AC091519.16| Mus musculus strain 129/SvJ chromosome 2 clone mgs1-452h5, complete
              sequence
          Length = 229220

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 445    tactggaatcactgcatctg 464
              ||||||||||||||||||||
Sbjct: 101765 tactggaatcactgcatctg 101746
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>emb|AL356600.13| Human DNA sequence from clone RP5-974J14 on chromosome 1p31.2-32.1
             Contains part of the NEGR1 gene for neuronal growth
             regulator 1 and part of a novel gene, complete sequence
          Length = 131457

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 365   tcgccatcatcatcataccaagca 388
             |||||||||||||||||| |||||
Sbjct: 95694 tcgccatcatcatcatactaagca 95717
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>emb|AL845258.5| Mouse DNA sequence from clone RP23-315H12 on chromosome 2, complete
             sequence
          Length = 164324

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   tactggaatcactgcatctg 464
             ||||||||||||||||||||
Sbjct: 38104 tactggaatcactgcatctg 38123
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>gb|BC025586.1| Mus musculus TBC1 domain family, member 13, mRNA (cDNA clone
            MGC:38260 IMAGE:5324875), complete cds
          Length = 3513

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  tactggaatcactgcatctg 464
            ||||||||||||||||||||
Sbjct: 3238 tactggaatcactgcatctg 3257
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>dbj|AK133266.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932427H20 product:hypothetical
            Proline-rich region profile containing protein, full
            insert sequence
          Length = 2592

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   ctgtttccctgtctagggga 48
            ||||||||||||||||||||
Sbjct: 1093 ctgtttccctgtctagggga 1074
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>dbj|AK135706.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420405E19 product:weakly
           similar to CG30497-PC [Drosophila melanogaster], full
           insert sequence
          Length = 2259

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 actgccttggtgagctggaa 154
           ||||||||||||||||||||
Sbjct: 599 actgccttggtgagctggaa 580
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>dbj|AK137659.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
           library, clone:9930014O05 product:weakly similar to
           CG30497-PC [Drosophila melanogaster], full insert
           sequence
          Length = 2284

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 actgccttggtgagctggaa 154
           ||||||||||||||||||||
Sbjct: 605 actgccttggtgagctggaa 586
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>dbj|AK158066.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930025B07 product:TBC1 domain family,
            member 13, full insert sequence
          Length = 3546

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  tactggaatcactgcatctg 464
            ||||||||||||||||||||
Sbjct: 3292 tactggaatcactgcatctg 3311
to top
>dbj|AK162145.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420438E24 product:weakly
           similar to CG30497-PC [Drosophila melanogaster], full
           insert sequence
          Length = 1985

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 actgccttggtgagctggaa 154
           ||||||||||||||||||||
Sbjct: 312 actgccttggtgagctggaa 293
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>gb|DQ393819.1| Melampsora lini microsatellite Ml-22 sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 catcatcatcataccaagca 388
           ||||||||||||||||||||
Sbjct: 369 catcatcatcataccaagca 350
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>dbj|AK163215.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020002D20 product:weakly similar to CG30497-PC
           [Drosophila melanogaster], full insert sequence
          Length = 2261

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 actgccttggtgagctggaa 154
           ||||||||||||||||||||
Sbjct: 604 actgccttggtgagctggaa 585
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>dbj|AK028944.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732473B16 product:weakly similar to
           DJ991C6.1 (NOVEL PROTEIN SIMILAR TO C. ELEGANS F55A12.9
           (TR:P91086)) [Homo sapiens], full insert sequence
          Length = 2281

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 actgccttggtgagctggaa 154
           ||||||||||||||||||||
Sbjct: 601 actgccttggtgagctggaa 582
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>dbj|AK011204.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2600014A06
           product:unclassifiable, full insert sequence
          Length = 979

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 tactggaatcactgcatctg 464
           ||||||||||||||||||||
Sbjct: 726 tactggaatcactgcatctg 745
to top
>gb|DQ144809.1| Asellus aquaticus isolate Pu5 cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial
          Length = 653

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 36  cctgtctaggggattaattg 55
           ||||||||||||||||||||
Sbjct: 282 cctgtctaggggattaattg 301
to top
>ref|NM_175307.2| Mus musculus RIKEN cDNA 4732473B16 gene (4732473B16Rik), mRNA
          Length = 2281

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 actgccttggtgagctggaa 154
           ||||||||||||||||||||
Sbjct: 601 actgccttggtgagctggaa 582
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>gb|AF269992.1|AF269992 Staphylococcus epidermidis strain SR1 clone step.1039b07 genomic
            sequence
          Length = 3475

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                            
Query: 511  atgatagatatgcaataca-gatctttcacag 541
            |||||| |||||||||||| ||||||||||||
Sbjct: 3402 atgatacatatgcaatacacgatctttcacag 3371
to top
>gb|AF269813.1|AF269813 Staphylococcus epidermidis strain SR1 clone step.1023h11 genomic
            sequence
          Length = 3234

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                            
Query: 511  atgatagatatgcaataca-gatctttcacag 541
            |||||| |||||||||||| ||||||||||||
Sbjct: 1749 atgatacatatgcaatacacgatctttcacag 1718
to top
>gb|AF269788.1|AF269788 Staphylococcus epidermidis strain SR1 clone step.1023e11 genomic
            sequence
          Length = 3164

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                            
Query: 511  atgatagatatgcaataca-gatctttcacag 541
            |||||| |||||||||||| ||||||||||||
Sbjct: 1680 atgatacatatgcaatacacgatctttcacag 1649
to top
>gb|AC125090.3| Mus musculus BAC clone RP24-162F23 from chromosome 5, complete sequence
          Length = 155143

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     tatattgtggaagtacgtgt 117
              ||||||||||||||||||||
Sbjct: 102573 tatattgtggaagtacgtgt 102592
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>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0024G09
          Length = 175565

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 555    tgttaataacttcactgcag 574
              ||||||||||||||||||||
Sbjct: 132814 tgttaataacttcactgcag 132833
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>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                               
Query: 511     atgatagatatgcaataca-gatctttcacag 541
               |||||| |||||||||||| ||||||||||||
Sbjct: 1896407 atgatacatatgcaatacacgatctttcacag 1896376
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>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                               
Query: 511     atgatagatatgcaataca-gatctttcacag 541
               |||||| |||||||||||| ||||||||||||
Sbjct: 1901401 atgatacatatgcaatacacgatctttcacag 1901370
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>emb|CT025673.8| Mouse DNA sequence from clone RP24-286H7 on chromosome 9, complete
              sequence
          Length = 148870

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     ctgtttccctgtctagggga 48
              ||||||||||||||||||||
Sbjct: 125914 ctgtttccctgtctagggga 125933
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>emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on chromosome 4, complete
             sequence
          Length = 193813

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   actgccttggtgagctggaa 154
             ||||||||||||||||||||
Sbjct: 62171 actgccttggtgagctggaa 62152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,855,626
Number of Sequences: 3902068
Number of extensions: 4855626
Number of successful extensions: 116932
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 116770
Number of HSP's gapped (non-prelim): 167
length of query: 604
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 581
effective length of database: 17,143,297,704
effective search space: 9960255966024
effective search space used: 9960255966024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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