ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal26d23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_183451.2| Oryza sativa (japonica cultivar-group), mRNA 176 5e-41
2dbj|AK100002.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 5e-41
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
4dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
5dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
6dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
7ref|NM_121313.3| Arabidopsis thaliana unknown protein AT5G13100 ... 56 1e-04
8gb|BT020363.1| Arabidopsis thaliana At5g13100 gene, complete cds 56 1e-04
9gb|AY058168.1| Arabidopsis thaliana AT5g13100/T19L5_60 mRNA, com... 56 1e-04
10emb|BX830714.1|CNS0A1NX Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
11emb|BX829394.1|CNS0A04Z Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
12emb|BX831736.1|CNS09ZRQ Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
13emb|BX829632.1|CNS09ZZI Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
14emb|BX830955.1|CNS09ZJC Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
15emb|BX830344.1|CNS0A07W Arabidopsis thaliana Full-length cDNA Co... 50 0.008
16emb|BX832255.1|CNS09ZVQ Arabidopsis thaliana Full-length cDNA Co... 50 0.008
17emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BA... 44 0.51
18gb|AC141209.11| Mus musculus chromosome 3, clone RP23-199M5, com... 44 0.51
19emb|AL662885.7| Human DNA sequence from clone RP13-208E17 on chr... 42 2.0
20emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on ch... 42 2.0
21gb|AC137844.8| Mus musculus, clone RP23-415L22, complete sequence 42 2.0
22ref|XM_688188.1| PREDICTED: Danio rerio similar to UDP-N-acetylg... 42 2.0
23emb|BX832168.1|CNS09ZMD Arabidopsis thaliana Full-length cDNA Co... 42 2.0
24gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, c... 42 2.0
25emb|BX072575.6| Zebrafish DNA sequence from clone DKEY-222H18 in... 42 2.0
26ref|NM_125509.2| Arabidopsis thaliana AACT1; transferase AT5G611... 40 7.9
27gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Ho... 40 7.9
28gb|BT011800.1| Arabidopsis thaliana At5g61160 mRNA sequence 40 7.9
29gb|AC122820.4| Mus musculus BAC clone RP23-200M5 from chromosome... 40 7.9
30ref|XM_847350.1| PREDICTED: Canis familiaris similar to Homeobox... 40 7.9
31emb|BX901910.12| Zebrafish DNA sequence from clone DKEY-14I8 in ... 40 7.9
32gb|AC164406.5| Mus musculus chromosome 3, clone RP24-391L20, com... 40 7.9
33emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 i... 40 7.9
34gb|AC102399.11| Mus musculus chromosome 3, clone RP24-217J3, com... 40 7.9
35emb|AL596443.4| Human DNA sequence from clone RP11-268K4 on chro... 40 7.9
36emb|AL356952.18| Human DNA sequence from clone RP11-809M12 on ch... 40 7.9
37gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Ho... 40 7.9
38gb|AY133543.1| Arabidopsis thaliana At5g61160/maf19_160 mRNA, co... 40 7.9
39gb|AC040975.8| Homo sapiens chromosome 8, clone RP11-662B19, com... 40 7.9
40gb|AC091237.6| Mus musculus Strain C57BL7/J Chromosome 14 RP23-4... 40 7.9
41gb|AY037199.1| Arabidopsis thaliana AT5g61160/maf19_160 mRNA, co... 40 7.9
42gb|AY089155.1| Arabidopsis thaliana clone 39563 mRNA, complete s... 40 7.9
43dbj|AB006696.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.9
44emb|BX640589.8| Zebrafish DNA sequence from clone CH211-222H13 i... 40 7.9
45gb|AC102364.5| Mus musculus chromosome 9, clone RP23-106P6, comp... 40 7.9 
>ref|NM_183451.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1771

 Score =  176 bits (89), Expect = 5e-41
 Identities = 110/117 (94%)
 Strand = Plus / Minus

                                                                        
Query: 451  tcctcaaagtacaacagctgccttgtctggagtaacatgctggaggacggtggcgatcaa 510
            |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 1128 tcctcaaagtacaacagctgccttgtctggagtaacattctggaggacagtggctatcaa 1069

                                                                     
Query: 511  tggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaatagaaa 567
             ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1068 aggctcataatggtcggcaccagcaccacaccatgctgttcccttcatgaaaagaaa 1012



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 348  tcctcttgggcatagatgttgctccacaactcggcactctagctccggtgacaaaattgg 407
            |||||||||||||||| |||||||| |||    ||| |||||||| | | ||||||||||
Sbjct: 1238 tcctcttgggcatagacgttgctcctcaataaagcaatctagctcagattacaaaattgg 1179

                        
Query: 408  ctcgactgcatc 419
            ||||||| ||||
Sbjct: 1178 ctcgactccatc 1167
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>dbj|AK100002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E13, full
            insert sequence
          Length = 1771

 Score =  176 bits (89), Expect = 5e-41
 Identities = 110/117 (94%)
 Strand = Plus / Minus

                                                                        
Query: 451  tcctcaaagtacaacagctgccttgtctggagtaacatgctggaggacggtggcgatcaa 510
            |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 1128 tcctcaaagtacaacagctgccttgtctggagtaacattctggaggacagtggctatcaa 1069

                                                                     
Query: 511  tggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaatagaaa 567
             ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1068 aggctcataatggtcggcaccagcaccacaccatgctgttcccttcatgaaaagaaa 1012



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 348  tcctcttgggcatagatgttgctccacaactcggcactctagctccggtgacaaaattgg 407
            ||||||| |||||||| |||||||| |||    ||| |||||||| | | ||||||||||
Sbjct: 1238 tcctctttggcatagacgttgctcctcaataaagcaatctagctcagattacaaaattgg 1179

                        
Query: 408  ctcgactgcatc 419
            ||||||| ||||
Sbjct: 1178 ctcgactccatc 1167
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  147 bits (74), Expect = 5e-32
 Identities = 92/98 (93%)
 Strand = Plus / Minus

                                                                          
Query: 451    tcctcaaagtacaacagctgccttgtctggagtaacatgctggaggacggtggcgatcaa 510
              |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 142911 tcctcaaagtacaacagctgccttgtctggagtaacattctggaggacagtggctatcaa 142852

                                                    
Query: 511    tggctcgtaatggtccgcaccagcaccacaccatgctg 548
               ||||| |||||||| ||||||||||||||||||||||
Sbjct: 142851 aggctcataatggtcggcaccagcaccacaccatgctg 142814



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                          
Query: 348    tcctcttgggcatagatgttgctccacaactcggcactctagctccggtgacaaaattgg 407
              |||||||||||||||| |||||||| |||    ||| |||||||| | | ||||||||||
Sbjct: 143021 tcctcttgggcatagacgttgctcctcaataaagcaatctagctcagattacaaaattgg 142962

                          
Query: 408    ctcgactgcatc 419
              ||||||| ||||
Sbjct: 142961 ctcgactccatc 142950
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>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0672D08
          Length = 173729

 Score =  147 bits (74), Expect = 5e-32
 Identities = 92/98 (93%)
 Strand = Plus / Minus

                                                                          
Query: 451    tcctcaaagtacaacagctgccttgtctggagtaacatgctggaggacggtggcgatcaa 510
              |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 140713 tcctcaaagtacaacagctgccttgtctggagtaacattctggaggacagtggctatcaa 140654

                                                    
Query: 511    tggctcgtaatggtccgcaccagcaccacaccatgctg 548
               ||||| |||||||| ||||||||||||||||||||||
Sbjct: 140653 aggctcataatggtcggcaccagcaccacaccatgctg 140616



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                          
Query: 348    tcctcttgggcatagatgttgctccacaactcggcactctagctccggtgacaaaattgg 407
              |||||||||||||||| |||||||| |||    ||| |||||||| | | ||||||||||
Sbjct: 140823 tcctcttgggcatagacgttgctcctcaataaagcaatctagctcagattacaaaattgg 140764

                          
Query: 408    ctcgactgcatc 419
              ||||||| ||||
Sbjct: 140763 ctcgactccatc 140752
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>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0455C04
          Length = 147940

 Score =  147 bits (74), Expect = 5e-32
 Identities = 92/98 (93%)
 Strand = Plus / Minus

                                                                         
Query: 451   tcctcaaagtacaacagctgccttgtctggagtaacatgctggaggacggtggcgatcaa 510
             |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 91457 tcctcaaagtacaacagctgccttgtctggagtaacattctggaggacagtggctatcaa 91398

                                                   
Query: 511   tggctcgtaatggtccgcaccagcaccacaccatgctg 548
              ||||| |||||||| ||||||||||||||||||||||
Sbjct: 91397 aggctcataatggtcggcaccagcaccacaccatgctg 91360



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 348   tcctcttgggcatagatgttgctccacaactcggcactctagctccggtgacaaaattgg 407
             |||||||||||||||| |||||||| |||    ||| |||||||| | | ||||||||||
Sbjct: 91567 tcctcttgggcatagacgttgctcctcaataaagcaatctagctcagattacaaaattgg 91508

                         
Query: 408   ctcgactgcatc 419
             ||||||| ||||
Sbjct: 91507 ctcgactccatc 91496
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>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0402A09
          Length = 141966

 Score =  147 bits (74), Expect = 5e-32
 Identities = 92/98 (93%)
 Strand = Plus / Minus

                                                                          
Query: 451    tcctcaaagtacaacagctgccttgtctggagtaacatgctggaggacggtggcgatcaa 510
              |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 127841 tcctcaaagtacaacagctgccttgtctggagtaacattctggaggacagtggctatcaa 127782

                                                    
Query: 511    tggctcgtaatggtccgcaccagcaccacaccatgctg 548
               ||||| |||||||| ||||||||||||||||||||||
Sbjct: 127781 aggctcataatggtcggcaccagcaccacaccatgctg 127744



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                          
Query: 348    tcctcttgggcatagatgttgctccacaactcggcactctagctccggtgacaaaattgg 407
              |||||||||||||||| |||||||| |||    ||| |||||||| | | ||||||||||
Sbjct: 127951 tcctcttgggcatagacgttgctcctcaataaagcaatctagctcagattacaaaattgg 127892

                          
Query: 408    ctcgactgcatc 419
              ||||||| ||||
Sbjct: 127891 ctcgactccatc 127880
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>ref|NM_121313.3| Arabidopsis thaliana unknown protein AT5G13100 mRNA, complete cds
          Length = 1495

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaataga 565
            ||||| |||||||||||||| || ||| ||||||||||  | || || ||||||||||||
Sbjct: 1142 atcaagggctcgtaatggtctgctccaccaccacaccaaccagtgcctttcatgaataga 1083

                
Query: 566  aaga 569
            ||||
Sbjct: 1082 aaga 1079
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>gb|BT020363.1| Arabidopsis thaliana At5g13100 gene, complete cds
          Length = 1065

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaataga 565
            ||||| |||||||||||||| || ||| ||||||||||  | || || ||||||||||||
Sbjct: 1013 atcaagggctcgtaatggtctgctccaccaccacaccaaccagtgcctttcatgaataga 954

                
Query: 566  aaga 569
            ||||
Sbjct: 953  aaga 950
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>gb|AY058168.1| Arabidopsis thaliana AT5g13100/T19L5_60 mRNA, complete cds
          Length = 1479

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaataga 565
            ||||| |||||||||||||| || ||| ||||||||||  | || || ||||||||||||
Sbjct: 1126 atcaagggctcgtaatggtctgctccaccaccacaccaaccagtgcctttcatgaataga 1067

                
Query: 566  aaga 569
            ||||
Sbjct: 1066 aaga 1063
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>emb|BX830714.1|CNS0A1NX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS17ZE01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1463

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaataga 565
            ||||| |||||||||||||| || ||| ||||||||||  | || || ||||||||||||
Sbjct: 1116 atcaagggctcgtaatggtctgctccaccaccacaccaaccagtgcctttcatgaataga 1057

                
Query: 566  aaga 569
            ||||
Sbjct: 1056 aaga 1053
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>emb|BX829394.1|CNS0A04Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB10ZG10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1421

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaataga 565
            ||||| |||||||||||||| || ||| ||||||||||  | || || ||||||||||||
Sbjct: 1109 atcaagggctcgtaatggtctgctccaccaccacaccaaccagtgcctttcatgaataga 1050

                
Query: 566  aaga 569
            ||||
Sbjct: 1049 aaga 1046
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>emb|BX831736.1|CNS09ZRQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH26ZH10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1374

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaataga 565
            ||||| |||||||||||||| || ||| ||||||||||  | || || ||||||||||||
Sbjct: 1063 atcaagggctcgtaatggtctgctccaccaccacaccaaccagtgcctttcatgaataga 1004

                
Query: 566  aaga 569
            ||||
Sbjct: 1003 aaga 1000
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>emb|BX829632.1|CNS09ZZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB26ZB08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1360

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaataga 565
            ||||| |||||||||||||| || ||| ||||||||||  | || || ||||||||||||
Sbjct: 1072 atcaagggctcgtaatggtctgctccaccaccacaccaaccagtgcctttcatgaataga 1013

                
Query: 566  aaga 569
            ||||
Sbjct: 1012 aaga 1009
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>emb|BX830955.1|CNS09ZJC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS41ZE10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1423

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaataga 565
            ||||| |||||||||||||| || ||| ||||||||||  | || || ||||||||||||
Sbjct: 1109 atcaagggctcgtaatggtctgctccaccaccacaccaaccagtgcctttcatgaataga 1050

                
Query: 566  aaga 569
            ||||
Sbjct: 1049 aaga 1046
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>emb|BX830344.1|CNS0A07W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB74ZE09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1427

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 513  gctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaatagaaaga 569
            |||||| |||||| || ||| ||||||||||  | ||||| ||||||||||||||||
Sbjct: 1104 gctcgtgatggtctgctccaccaccacaccaaccagttcctttcatgaatagaaaga 1048
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>emb|BX832255.1|CNS09ZVQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH61ZC04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1415

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 56/65 (86%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccac-accatgctgttcccttcatgaatag 564
            ||||| |||||||||||||| || ||| |||||| ||||  | ||||| |||||||||||
Sbjct: 1100 atcaagggctcgtaatggtctgctccaccaccacgaccaaccagttcctttcatgaatag 1041

                 
Query: 565  aaaga 569
            |||||
Sbjct: 1040 aaaga 1036
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>emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BAC clone T19L5 (ESSA project)
          Length = 82207

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 506   atcaatggctcgtaatggtccgcaccagcaccacacca 543
             ||||| |||||||||||||| || ||| ||||||||||
Sbjct: 31509 atcaagggctcgtaatggtctgctccaccaccacacca 31472
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>gb|AC141209.11| Mus musculus chromosome 3, clone RP23-199M5, complete sequence
          Length = 192274

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 531   cagcaccacaccatgctgttcc 552
             ||||||||||||||||||||||
Sbjct: 86770 cagcaccacaccatgctgttcc 86791
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>emb|AL662885.7| Human DNA sequence from clone RP13-208E17 on chromosome X Contains the
              ZCCHC5 gene for zinc finger CCHC domain containing 5,
              complete sequence
          Length = 154060

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 179    aaaaagaatcaaatggaaaat 199
              |||||||||||||||||||||
Sbjct: 127500 aaaaagaatcaaatggaaaat 127520
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>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the
              TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for
              chromosome 9 open reading frame 9 protein, the 5' end of
              gene FLJ32704, two novel gene, the 5' end of a novel gene
              and three CpG islands, complete sequence
          Length = 199113

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 300    acaacaacaaaaaacgccatacaaa 324
              ||||||||||||||| |||||||||
Sbjct: 194681 acaacaacaaaaaaccccatacaaa 194657
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>gb|AC137844.8| Mus musculus, clone RP23-415L22, complete sequence
          Length = 188189

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 296   acatacaacaacaaaaaacgc 316
             |||||||||||||||||||||
Sbjct: 53046 acatacaacaacaaaaaacgc 53026
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>ref|XM_688188.1| PREDICTED: Danio rerio similar to UDP-N-acetylglucosamine:
           alpha-1,3-D-mannoside
           beta-1,4-N-acetylglucosaminyltransferase IV (LOC564864),
           mRNA
          Length = 1434

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 40  tgggctacataggaaagctgt 60
           |||||||||||||||||||||
Sbjct: 752 tgggctacataggaaagctgt 772
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>emb|BX832168.1|CNS09ZMD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH56ZC04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1366

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 55/65 (84%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccac-accatgctgttcccttcatgaatag 564
            ||||| |||||||||||||| || ||| |||||| ||||  | || || |||||||||||
Sbjct: 1064 atcaagggctcgtaatggtctgctccaccaccacgaccaaccagtgcctttcatgaatag 1005

                 
Query: 565  aaaga 569
            |||||
Sbjct: 1004 aaaga 1000
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>gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, complete sequence
          Length = 242383

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 293    cgaacatacaacaacaaaaaa 313
              |||||||||||||||||||||
Sbjct: 144030 cgaacatacaacaacaaaaaa 144050
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>emb|BX072575.6| Zebrafish DNA sequence from clone DKEY-222H18 in linkage group 18,
             complete sequence
          Length = 177284

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    tgggctacataggaaagctgt 60
             |||||||||||||||||||||
Sbjct: 10963 tgggctacataggaaagctgt 10943
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>ref|NM_125509.2| Arabidopsis thaliana AACT1; transferase AT5G61160 (AACT1) mRNA,
            complete cds
          Length = 1581

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  accatctctcctcttgggcataga 363
            ||||||||||||||||| ||||||
Sbjct: 1329 accatctctcctcttggacataga 1306
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>gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216677

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 547    tgttcccttcatgaatagaa 566
              ||||||||||||||||||||
Sbjct: 124839 tgttcccttcatgaatagaa 124820
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>gb|BT011800.1| Arabidopsis thaliana At5g61160 mRNA sequence
          Length = 1357

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  accatctctcctcttgggcataga 363
            ||||||||||||||||| ||||||
Sbjct: 1269 accatctctcctcttggacataga 1246
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>gb|AC122820.4| Mus musculus BAC clone RP23-200M5 from chromosome 6, complete sequence
          Length = 215238

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    agtacaagaacatgggctacatag 51
             ||||||||| ||||||||||||||
Sbjct: 94231 agtacaagaccatgggctacatag 94254
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>ref|XM_847350.1| PREDICTED: Canis familiaris similar to Homeobox protein Hox-D9
           (Hox-4.4) (Hox-5.2) (LOC609984), mRNA
          Length = 883

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 290 ccacgaacatacaacaacaaaaaa 313
           ||||||||| ||||||||||||||
Sbjct: 650 ccacgaacaaacaacaacaaaaaa 627
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>emb|BX901910.12| Zebrafish DNA sequence from clone DKEY-14I8 in linkage group 7,
             complete sequence
          Length = 131855

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 179   aaaaagaatcaaatggaaaatgcc 202
             ||||||||||||||||||| ||||
Sbjct: 44187 aaaaagaatcaaatggaaattgcc 44210
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>gb|AC164406.5| Mus musculus chromosome 3, clone RP24-391L20, complete sequence
          Length = 134552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   aacatacaacaacaaaaaacgcca 318
             ||||||||||||||||||| ||||
Sbjct: 18066 aacatacaacaacaaaaaaagcca 18089
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>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8,
             complete sequence
          Length = 130762

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 332   ttagacagaccatctctcctcttg 355
             ||||||||| ||||||||||||||
Sbjct: 42865 ttagacagatcatctctcctcttg 42888
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>gb|AC102399.11| Mus musculus chromosome 3, clone RP24-217J3, complete sequence
          Length = 168566

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    aacatacaacaacaaaaaacgcca 318
              ||||||||||||||||||| ||||
Sbjct: 153975 aacatacaacaacaaaaaaagcca 153998
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>emb|AL596443.4| Human DNA sequence from clone RP11-268K4 on chromosome 6 Contains a CpG
             island, complete sequence
          Length = 32305

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   aaagaatcaaatggaaaatg 200
             ||||||||||||||||||||
Sbjct: 23629 aaagaatcaaatggaaaatg 23610
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>emb|AL356952.18| Human DNA sequence from clone RP11-809M12 on chromosome 10 Contains a
             novel gene and a CpG island, complete sequence
          Length = 129950

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   caaaaagaatcaaatggaaa 197
             ||||||||||||||||||||
Sbjct: 71697 caaaaagaatcaaatggaaa 71716
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>gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227298

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 547    tgttcccttcatgaatagaa 566
              ||||||||||||||||||||
Sbjct: 221780 tgttcccttcatgaatagaa 221761
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>gb|AY133543.1| Arabidopsis thaliana At5g61160/maf19_160 mRNA, complete cds
          Length = 1359

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  accatctctcctcttgggcataga 363
            ||||||||||||||||| ||||||
Sbjct: 1272 accatctctcctcttggacataga 1249
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>gb|AC040975.8| Homo sapiens chromosome 8, clone RP11-662B19, complete sequence
          Length = 199112

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    aaaaggagaatccctcacaa 180
              ||||||||||||||||||||
Sbjct: 101394 aaaaggagaatccctcacaa 101413
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>gb|AC091237.6| Mus musculus Strain C57BL7/J Chromosome 14 RP23-470F15, complete sequence
          Length = 177104

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    tcccttcatgaatagaaaga 569
              ||||||||||||||||||||
Sbjct: 125064 tcccttcatgaatagaaaga 125045
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>gb|AY037199.1| Arabidopsis thaliana AT5g61160/maf19_160 mRNA, complete cds
          Length = 1562

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  accatctctcctcttgggcataga 363
            ||||||||||||||||| ||||||
Sbjct: 1329 accatctctcctcttggacataga 1306
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>gb|AY089155.1| Arabidopsis thaliana clone 39563 mRNA, complete sequence
          Length = 1396

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 54/64 (84%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                        
Query: 506  atcaatggctcgtaatggtccgcaccagcaccacaccatgctgttcccttcatgaataga 565
            ||||| |||||||||||||| || ||| |||| |||||  | || || ||||||||||||
Sbjct: 1069 atcaagggctcgtaatggtctgctccaccacc-caccaaccagtgcctttcatgaataga 1011

                
Query: 566  aaga 569
            ||||
Sbjct: 1010 aaga 1007
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>dbj|AB006696.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAF19
          Length = 78379

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 340   accatctctcctcttgggcataga 363
             ||||||||||||||||| ||||||
Sbjct: 58989 accatctctcctcttggacataga 58966
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>emb|BX640589.8| Zebrafish DNA sequence from clone CH211-222H13 in linkage group 19,
             complete sequence
          Length = 99460

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   acaacaacaaaaaacgccat 319
             ||||||||||||||||||||
Sbjct: 63435 acaacaacaaaaaacgccat 63454
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>gb|AC102364.5| Mus musculus chromosome 9, clone RP23-106P6, complete sequence
          Length = 208404

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    aacatacaacaacaaaaaac 314
              ||||||||||||||||||||
Sbjct: 131123 aacatacaacaacaaaaaac 131142


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,050,224
Number of Sequences: 3902068
Number of extensions: 6050224
Number of successful extensions: 182141
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 181985
Number of HSP's gapped (non-prelim): 151
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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