>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase
          Length = 5593

 Score =  389 bits (196), Expect = e-105
 Identities = 203/204 (99%), Gaps = 1/204 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    atatttcctttgcggtggaaatatgcaacccaatacatgttctgtagtcacaacttccta 60
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5266 atatttcctttgcggtg-aaatatgcaacccaatacatgttctgtagtcacaacttccta 5208

                                                                        
Query: 61   caagccaatctgtacaaattcatcatgatttcatgataaatgcacacgcagctacgtata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5207 caagccaatctgtacaaattcatcatgatttcatgataaatgcacacgcagctacgtata 5148

                                                                        
Query: 121  caatacaaacaaccccgcacatactgtacttgcttgggtcgtcacagtagctatttatca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5147 caatacaaacaaccccgcacatactgtacttgcttgggtcgtcacagtagctatttatca 5088

                                    
Query: 181  tctactactacacatctatatgta 204
            ||||||||||||||||||||||||
Sbjct: 5087 tctactactacacatctatatgta 5064



 Score =  163 bits (82), Expect = 4e-37
 Identities = 82/82 (100%)
 Strand = Plus / Minus

                                                                        
Query: 199  tatgtactagctagtttagtcgatcggatgagccatggatgtgtcaggtacgcacggtgc 258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5026 tatgtactagctagtttagtcgatcggatgagccatggatgtgtcaggtacgcacggtgc 4967

                                  
Query: 259  ttatagcgtagcgtagccagcc 280
            ||||||||||||||||||||||
Sbjct: 4966 ttatagcgtagcgtagccagcc 4945

>emb|BX005387.7| Zebrafish DNA sequence from clone DKEY-97G16 in linkage group 7, complete
              sequence
          Length = 152617

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 66     caatctgtacaaattcatcatgatttcat 94
              |||| ||||||||||||||| ||||||||
Sbjct: 120182 caatttgtacaaattcatcaagatttcat 120210

>gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EGFR) gene, complete
             cds, alternatively spliced; and 5S ribosomal RNA gene,
             complete sequence
          Length = 197496

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tggatgtgtcaggtacgcac 253
             ||||||||||||||||||||
Sbjct: 96332 tggatgtgtcaggtacgcac 96351

>gb|AY588246.1| Homo sapiens epidermal growth factor receptor (erythroblastic leukemia
             viral (v-erb-b) oncogene homolog, avian) (EGFR) gene,
             complete cds
          Length = 192168

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tggatgtgtcaggtacgcac 253
             ||||||||||||||||||||
Sbjct: 89049 tggatgtgtcaggtacgcac 89068

>emb|CR318614.7| Zebrafish DNA sequence from clone DKEY-24L7 in linkage group 23,
             complete sequence
          Length = 79471

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 66    caatctgtacaaattcatcatgatttca 93
             |||| ||||||||||||||| |||||||
Sbjct: 25904 caatttgtacaaattcatcaagatttca 25931

>gb|AC108943.4| Mus musculus BAC clone RP23-66D23 from chromosome 18, complete sequence
          Length = 191642

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     atttcatgataaatgcacac 107
              ||||||||||||||||||||
Sbjct: 174554 atttcatgataaatgcacac 174573

>gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, complete sequence
          Length = 191821

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    tggatgtgtcaggtacgcac 253
              ||||||||||||||||||||
Sbjct: 100081 tggatgtgtcaggtacgcac 100062

>gb|AE008762.1| Salmonella typhimurium LT2, section 66 of 220 of the complete
           genome
          Length = 21913

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  ttgcggtggaaatatgcaac 29
           ||||||||||||||||||||
Sbjct: 368 ttgcggtggaaatatgcaac 387

>emb|AL627271.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 7/20
          Length = 233050

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ttgcggtggaaatatgcaac 29
             ||||||||||||||||||||
Sbjct: 51828 ttgcggtggaaatatgcaac 51809

>gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 177   atcatctactactacacatctatatgtactag 208
             ||||||||||||||| |||||| || ||||||
Sbjct: 70948 atcatctactactactcatctacatctactag 70917

>gb|L32839.1|DROCDPR Drosophila melanogaster cell division cycle 37 protein gene, complete
            cds
          Length = 4074

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 177  atcatctactactacacatctatatgtactag 208
            ||||||||||||||| |||||| || ||||||
Sbjct: 1565 atcatctactactactcatctacatctactag 1534

>ref|NM_057658.4| Drosophila melanogaster Cdc37 CG12019-RA (Cdc37), mRNA
          Length = 1577

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 177 atcatctactactacacatctatatgtactag 208
           ||||||||||||||| |||||| || ||||||
Sbjct: 42  atcatctactactactcatctacatctactag 11

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      tatttatcatctactactac 191
                ||||||||||||||||||||
Sbjct: 15599899 tatttatcatctactactac 15599880

>gb|AY593803.1| Foot-and-mouth disease virus A isolate avenceslau iso70, complete
            genome
          Length = 8199

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  tgtacttgcttgggtcgtca 164
            ||||||||||||||||||||
Sbjct: 4607 tgtacttgcttgggtcgtca 4588

>gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7p11.2-p21, complete sequence
          Length = 177998

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tggatgtgtcaggtacgcac 253
             ||||||||||||||||||||
Sbjct: 96332 tggatgtgtcaggtacgcac 96351

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 10      ttgcggtggaaatatgcaac 29
               ||||||||||||||||||||
Sbjct: 1510396 ttgcggtggaaatatgcaac 1510377

>emb|AL929434.3| Zebrafish DNA sequence from clone CH211-127L15, complete sequence
          Length = 178948

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    caaattcatcatgatttcat 94
             ||||||||||||||||||||
Sbjct: 35394 caaattcatcatgatttcat 35413

>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1119_B10
          Length = 148508

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    tatttatcatctactactac 191
              ||||||||||||||||||||
Sbjct: 147657 tatttatcatctactactac 147638

>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0410E11
          Length = 150200

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   tatttatcatctactactac 191
             ||||||||||||||||||||
Sbjct: 34054 tatttatcatctactactac 34035

>emb|X99944.1|STYSCQRS S.typhimurium ssaQ, ssaR, ssaS, ssaT and ssaU genes
          Length = 5484

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 10   ttgcggtggaaatatgcaac 29
            ||||||||||||||||||||
Sbjct: 3793 ttgcggtggaaatatgcaac 3812

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 10      ttgcggtggaaatatgcaac 29
               ||||||||||||||||||||
Sbjct: 1356308 ttgcggtggaaatatgcaac 1356327

>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete
              sequence
          Length = 303191

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 177    atcatctactactacacatctatatgtactag 208
              ||||||||||||||| |||||| || ||||||
Sbjct: 260769 atcatctactactactcatctacatctactag 260738

>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 10      ttgcggtggaaatatgcaac 29
               ||||||||||||||||||||
Sbjct: 1539590 ttgcggtggaaatatgcaac 1539609

>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones
              DS02777, DS03222, DS02345, and DS04808, complete sequence
          Length = 257867

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 177    atcatctactactacacatctatatgtactag 208
              ||||||||||||||| |||||| || ||||||
Sbjct: 183935 atcatctactactactcatctacatctactag 183904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,154,815
Number of Sequences: 3902068
Number of extensions: 2154815
Number of successful extensions: 37780
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37721
Number of HSP's gapped (non-prelim): 58
length of query: 280
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 258
effective length of database: 17,147,199,772
effective search space: 4423977541176
effective search space used: 4423977541176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)