ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal25n24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulga... 385 e-104
2gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding p... 198 6e-48
3ref|XM_482572.1| Oryza sativa (japonica cultivar-group), mRNA 96 6e-17
4ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group... 96 6e-17
5ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group... 96 6e-17
6ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group... 96 6e-17
7ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group... 96 6e-17
8ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group... 96 6e-17
9gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyl... 96 6e-17
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 6e-17
11dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 96 6e-17
12dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 6e-17
13dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 6e-17
14dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 6e-17
15dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 6e-17
16dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 6e-17
17dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 6e-17
18gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding prot... 96 6e-17
19ref|XM_482573.1| Oryza sativa (japonica cultivar-group), mRNA 84 2e-13
20emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene 52 9e-04
21gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana... 46 0.053
22gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete... 42 0.83
23gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete... 42 0.83
24gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosom... 42 0.83
25gb|AF276663.1|AF276663 Drosophila melanogaster comb (cg) gene, c... 42 0.83
26gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35... 42 0.83
27gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complet... 42 0.83
28gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 3.3
29emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 i... 40 3.3
30gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 3.3
31gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide syn... 40 3.3 
>gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 939 nt]
          Length = 939

 Score =  385 bits (194), Expect = e-104
 Identities = 219/227 (96%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                       
Query: 26  attacaacacgtttttgcactgccacctactcctccacactttgtacatcctcagcaccc 85
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 attacaacacgtttttgcactgccacctactcctccacactttgtacatcctcagcaccc 750

                                                                       
Query: 86  caaaataataattcagaccacctgaaacctcattggtcggtgaaatcgacggatttattg 145
           ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 749 caaaataataattcagaccacct-aaacctccttggtcggtgaaatcgacggatttattg 691

                                                                       
Query: 146 gccggagatggtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggtt 205
           ||||||||||||||||||||||| |  | |||||||||||||||||||||||||||||||
Sbjct: 690 gccggagatggtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggtt 631

                                                          
Query: 206 ctcgaacggccccttcccggtcacgttgtgctgcaccaggaacccca 252
           |||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 630 ctcgaacggccccttcccgtgcacgttgtgctgcaccaggaacccca 584
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>gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4)
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 687

 Score =  198 bits (100), Expect = 6e-48
 Identities = 109/113 (96%)
 Strand = Plus / Minus

                                                                       
Query: 140 ttattggccggagatggtctggatgatggggnngngccatgggtcggccaggtgctgctg 199
           ||||||||||||||||||||||||||||| |  | |||||||||||||||||||||||||
Sbjct: 687 ttattggccggagatggtctggatgatggtgttgtgccatgggtcggccaggtgctgctg 628

                                                                
Query: 200 caggttctcgaacggccccttcccggtcacgttgtgctgcaccaggaacccca 252
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 caggttctcgaacggccccttcccggtcacgttgtgctgcaccaggaacccca 575
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>ref|XM_482572.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1070

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 787 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 728

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 727 cccttctgcgtcacgttgtgctgcaccaggaacccca 691
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>ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1138

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaacccca 695
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>ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1138

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaacccca 695
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>ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1178

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 788 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 729

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 728 cccttctgcgtcacgttgtgctgcaccaggaacccca 692
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>ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1188

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 787 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 728

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 727 cccttctgcgtcacgttgtgctgcaccaggaacccca 691
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>ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1191

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 790 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 731

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 730 cccttctgcgtcacgttgtgctgcaccaggaacccca 694
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>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding
           protein presusor mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 1128

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 767 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 708

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 707 cccttctgcgtcacgttgtgctgcaccaggaacccca 671
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                            
Query: 156      gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
                ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 21164438 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 21164497

                                                     
Query: 216      cccttcccggtcacgttgtgctgcaccaggaacccca 252
                ||||||   ||||||||||||||||||||||||||||
Sbjct: 21164498 cccttctgcgtcacgttgtgctgcaccaggaacccca 21164534
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>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0413H11
          Length = 147655

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                          
Query: 156    gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
              ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 135648 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 135707

                                                   
Query: 216    cccttcccggtcacgttgtgctgcaccaggaacccca 252
              ||||||   ||||||||||||||||||||||||||||
Sbjct: 135708 cccttctgcgtcacgttgtgctgcaccaggaacccca 135744
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>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full
           insert sequence
          Length = 1140

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaacccca 695
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>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full
           insert sequence
          Length = 1177

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 788 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 729

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 728 cccttctgcgtcacgttgtgctgcaccaggaacccca 692
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>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full
           insert sequence
          Length = 1193

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 792 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 733

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 732 cccttctgcgtcacgttgtgctgcaccaggaacccca 696
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>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full
           insert sequence
          Length = 1190

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 789 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 730

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 729 cccttctgcgtcacgttgtgctgcaccaggaacccca 693
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>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full
           insert sequence
          Length = 1138

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaacccca 695
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>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full
           insert sequence
          Length = 1078

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 796 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 737

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 736 cccttctgcgtcacgttgtgctgcaccaggaacccca 700
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>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27)
           mRNA, nuclear gene encoding chloroplast protein,
           complete cds
          Length = 1162

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 156 gtctggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggc 215
           ||||||||||||| |  | |||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 754 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 695

                                                
Query: 216 cccttcccggtcacgttgtgctgcaccaggaacccca 252
           ||||||   ||||||||||||||||||||||||||||
Sbjct: 694 cccttctgcgtcacgttgtgctgcaccaggaacccca 658
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>ref|XM_482573.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 576

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                       
Query: 175 gccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtcacgttgt 234
           |||| ||||| | |||||||||| ||||||| ||||| |||||||||   ||||||||||
Sbjct: 14  gccacgggtcagacaggtgctgcagcaggttgtcgaagggccccttctgcgtcacgttgt 73

                             
Query: 235 gctgcaccaggaacccca 252
           ||||||||||||||||||
Sbjct: 74  gctgcaccaggaacccca 91
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>emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene
          Length = 1393

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 159  tggatgatggggnngngccatgggtcggccaggtgctgctgcaggttctcgaacggcccc 218
            |||||||||| |  | |||||||||| |  ||||||||| | ||||| || || || |||
Sbjct: 1192 tggatgatggtgttgtgccatgggtcagagaggtgctgcagaaggttgtcaaaaggtccc 1133

                                   
Query: 219  ttcccggtcacgttgtgctgcac 241
            ||||| ||||| |||||||||||
Sbjct: 1132 ttcccagtcacattgtgctgcac 1110
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>gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana, Clone T5E15, Chromosome V,
             complete sequence
          Length = 114056

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 51    cctactcctccacactttgtaca 73
             |||||||||||||||||||||||
Sbjct: 37526 cctactcctccacactttgtaca 37504
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>gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete sequence
          Length = 186333

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 45    ctgccacctactcctccacac 65
             |||||||||||||||||||||
Sbjct: 11776 ctgccacctactcctccacac 11756
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>gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete sequence
          Length = 165177

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    ctgccacctactcctccacac 65
             |||||||||||||||||||||
Sbjct: 60657 ctgccacctactcctccacac 60677
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>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete
             sequence
          Length = 222209

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 78    cagcaccccaaaataataatt 98
             |||||||||||||||||||||
Sbjct: 97909 cagcaccccaaaataataatt 97929
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>gb|AF276663.1|AF276663 Drosophila melanogaster comb (cg) gene, complete cds, alternatively
            spliced
          Length = 9504

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 45   ctgccacctactcctccacac 65
            |||||||||||||||||||||
Sbjct: 4304 ctgccacctactcctccacac 4324
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>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete
             sequence
          Length = 229685

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    ctgccacctactcctccacac 65
             |||||||||||||||||||||
Sbjct: 31518 ctgccacctactcctccacac 31538
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>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence
          Length = 217949

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 78   cagcaccccaaaataataatt 98
            |||||||||||||||||||||
Sbjct: 9849 cagcaccccaaaataataatt 9829
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>gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-333I24, complete
              sequence
          Length = 215829

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     catcctcagcaccccaaaat 91
              ||||||||||||||||||||
Sbjct: 132164 catcctcagcaccccaaaat 132183
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>emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 in linkage group 9,
             complete sequence
          Length = 179135

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    caccccaaaataataattca 100
             ||||||||||||||||||||
Sbjct: 16903 caccccaaaataataattca 16922
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    tcggccaggtgctgctgcag 202
              ||||||||||||||||||||
Sbjct: 665703 tcggccaggtgctgctgcag 665722
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>gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide synthetase (fkbP), FK506
            oxidase (fkbO), and FK506 polyketide synthase (fkbB)
            genes, complete cds
          Length = 28732

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 181  ggtcggccaggtgctgctgcaggt 204
            ||||| ||||||||||||||||||
Sbjct: 3454 ggtcgtccaggtgctgctgcaggt 3431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,308,527
Number of Sequences: 3902068
Number of extensions: 2308527
Number of successful extensions: 42100
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42042
Number of HSP's gapped (non-prelim): 57
length of query: 254
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 232
effective length of database: 17,147,199,772
effective search space: 3978150347104
effective search space used: 3978150347104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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