| Clone Name | rbaal26b18 |
|---|---|
| Clone Library Name | barley_pub |
>MAD18_ORYSA (Q6Z4G0) MADS-box transcription factor 18 (OsMADS18) (MADS-box| protein 2) (OsMADS2) (MADS-box protein 28) (OsMADS28) (FDRMADS7) Length = 249 Score = 56.6 bits (135), Expect = 5e-08 Identities = 29/59 (49%), Positives = 33/59 (55%) Frame = -3 Query: 597 EQLSGAXXXXXXXXXXTAQDSMAPPNIGPYQSRGGGDPEPQPSPAQANNSNLPPWMLRT 421 E+ +GA TA D + N Q RG G+ E QPSPAQA NS LPPWMLRT Sbjct: 188 EEQNGATPSTSSPTPVTAPDPIPTTNNSQSQPRGSGESEAQPSPAQAGNSKLPPWMLRT 246
>TRYP_SARBU (P51588) Trypsin precursor (EC 3.4.21.4)| Length = 254 Score = 33.1 bits (74), Expect = 0.63 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = +1 Query: 70 GWNTKTVSTCKTIPQIH*SLHTKVQPQDRAHRSAKKKGN*NVETRHCSL*CRKSSRQEDP 249 GW TK TC ++P+ + + Q + K G+ +T C+ +K + Q D Sbjct: 149 GWGTKCFLTCVSLPKTLQEVEVDIVDQKACASNEFKYGSQIQDTMVCAYALKKDACQGDS 208 Query: 250 IHPVAKTHGLIGGYT-GSHCRR 312 P+ + L+G + GS C R Sbjct: 209 GGPLVANNQLVGIVSWGSGCAR 230
>ITA7_RAT (Q63258) Integrin alpha-7 (H36-alpha7) [Contains: Integrin alpha-7| heavy chain; Integrin alpha-7 light chain] Length = 1106 Score = 30.4 bits (67), Expect = 4.1 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -3 Query: 534 MAPPNIGPYQSRGGGDPEPQPSPAQANN 451 +A + GPY++ G D +P+PSP AN+ Sbjct: 206 LAQVDDGPYEAGGEKDQDPRPSPVPANS 233
>SPEE_SHIFL (Q83MF0) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 287 Score = 30.4 bits (67), Expect = 4.1 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = +1 Query: 253 HPVAKTHGLIGGYTGSHCRRWTAHRQLASIVGACQAPLSPSGGVV*GCRQ--PSSVADGA 426 H AK +IGG G+ R T H+ + SI + GVV CRQ P+ A Sbjct: 74 HGHAKHVLIIGGGDGAMLREVTRHKNVESI-----TMVEIDAGVVSFCRQYLPNHNAGSY 128 Query: 427 EHPRWQIAV 453 + PR+Q+ + Sbjct: 129 DDPRFQLVI 137
>Y044_UREPA (Q9PRA1) Hypothetical protein UU044| Length = 782 Score = 30.4 bits (67), Expect = 4.1 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -3 Query: 543 QDSMAPPNIGPYQSRGGGDPEPQPSPAQA-NNSN 445 ++ + PPN P + +P PQP P Q NNSN Sbjct: 139 KEELLPPNPPPPKEEPKPEPNPQPQPQQVPNNSN 172
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 30.0 bits (66), Expect = 5.3 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 540 DSMAPPNIGPYQSRGGGDPEPQPSPAQANNSNLPPWMLRTI 418 D+ PP P Q + PEP+P P +A+ PP L+T+ Sbjct: 2201 DAPQPPAPQPAQDKA---PEPRPEPVRASKPAPPPQALQTL 2238
>HOLB_BUCAP (Q8K9J2) DNA polymerase III delta' subunit (EC 2.7.7.7)| Length = 328 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 98 VKPYRKSIKAYTRKSNHKIVLIDQRKKKG 184 +KPY+K I+ + RK H +LI +K G Sbjct: 8 IKPYKKIIRLHERKKAHHAILIKTQKGMG 36
>KHSE_YEAST (P17423) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)| Length = 356 Score = 29.3 bits (64), Expect = 9.1 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 2/72 (2%) Frame = +1 Query: 253 HPVAKTHGLIGGYTGSHCRRWTAHRQLASIVGACQAPLSPSGGVV*GCRQPSSVADGAEH 432 HP T ++GG+ GS R T + + PSGG G P D H Sbjct: 145 HPDNITAAMMGGFCGSFLRDLTPQEVERREIPLAEVLPEPSGGEDTGLVPPLPPTDIGRH 204 Query: 433 PR--WQIAVVCL 462 + W A+ C+ Sbjct: 205 VKYQWNPAIKCI 216
>TNIK_HUMAN (Q9UKE5) TRAF2 and NCK-interacting kinase (EC 2.7.11.1)| Length = 1360 Score = 29.3 bits (64), Expect = 9.1 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -2 Query: 457 KQQQSATVDAPHHRQQMKAGDSLIRLHLKATMAPDTRPLW 338 KQ++ V H RQ+ + + H K M+P +P W Sbjct: 494 KQERDYLVSLQHQRQEQRPVEKKPLYHYKEGMSPSEKPAW 533
>AEPE_BPA18 (Q37976) L-alanyl-D-glutamate peptidase (EC 3.4.-.-)| Length = 281 Score = 29.3 bits (64), Expect = 9.1 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +3 Query: 198 NKTLLPIVQEKLKTGRPHSPCSKDTW 275 N TLL KLK G+PH+P SK+T+ Sbjct: 189 NTTLLA----KLKAGKPHTPASKNTY 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,139,252 Number of Sequences: 219361 Number of extensions: 2124409 Number of successful extensions: 6833 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 6391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6811 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)