Clone Information

BLAST Search Result

Clone Name	rbaal25m15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	APOD_MOUSE (P51910) Apolipoprotein D precursor (Apo-D) (ApoD)	47	4e-05
2	APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)	45	1e-04
3	PTGDS_MACFU (Q9TUI1) Prostaglandin-H2 D-isomerase precursor (EC ...	39	0.010
4	PTGDS_HORSE (O97921) Prostaglandin-H2 D-isomerase precursor (EC ...	38	0.013
5	PTGDS_PONPY (Q8WNM0) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.023
6	PTGDS_HUMAN (P41222) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.023
7	PTGDS_GORGO (Q8WNM1) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.030
8	PTGDS_FELCA (Q29487) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.039
9	PTGDS_URSAR (Q29562) Prostaglandin-H2 D-isomerase precursor (EC ...	36	0.051
10	PTGDS_CANFA (Q9XS65) Prostaglandin-H2 D-isomerase precursor (EC ...	36	0.051
11	APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)	35	0.086
12	APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)	35	0.11
13	BLG4_BLAGE (P54962) Allergen Bla g 4 precursor (Bla g IV) (Fragm...	34	0.25
14	PTGDS_SHEEP (Q9XSM0) Prostaglandin-H2 D-isomerase precursor (EC ...	33	0.33
15	APOD_CAVPO (P51909) Apolipoprotein D precursor (Apo-D) (ApoD)	33	0.33
16	EXFAB_COTJA (Q9I9P7) Extracellular fatty acid-binding protein pr...	33	0.43
17	RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2	33	0.56
18	CRA2_HOMGA (P80007) Crustacyanin-A2 subunit	33	0.56
19	NHR18_CAEEL (O16360) Nuclear hormone receptor family member nhr-18	32	0.73
20	PTGDS_PIG (Q29095) Prostaglandin-H2 D-isomerase precursor (EC 5....	32	0.73
21	PTGDS_BOVIN (O02853) Prostaglandin-H2 D-isomerase precursor (EC ...	32	0.95
22	APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)	32	0.95
23	LAZA_SCHAM (P49291) Lazarillo protein precursor	32	0.95
24	ISW1_YEAST (P38144) Chromatin remodelling complex ATPase chain I...	32	1.2
25	PURP_CHICK (P08938) Purpurin precursor	31	1.6
26	VL2_HPV55 (Q80939) Minor capsid protein L2	31	1.6
27	CRC1_HOMGA (P80029) Crustacyanin-C1 subunit	31	1.6
28	CRA1_HOMGA (P58989) Crustacyanin-A1 subunit	31	1.6
29	MFRP_MOUSE (Q8K480) Membrane frizzled-related protein (Membrane-...	31	1.6
30	NGAL_MOUSE (P11672) Neutrophil gelatinase-associated lipocalin p...	31	2.1
31	MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) ...	30	2.8
32	FOS_CHICK (P11939) Proto-oncogene protein c-fos (Cellular oncoge...	30	2.8
33	FOS_PIG (O97930) Proto-oncogene protein c-fos (Cellular oncogene...	30	2.8
34	EXFAB_CHICK (P21760) Extracellular fatty acid-binding protein pr...	30	2.8
35	FOS_AVINK (P23050) p55-v-Fos transforming protein	30	2.8
36	YAN4_SCHPO (Q10070) Hypothetical protein C3H1.04c in chromosome I	30	3.6
37	RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2	30	4.7
38	MUP3_MOUSE (P04939) Major urinary protein 3 precursor (MUP 3) (N...	30	4.7
39	BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor	29	6.2
40	BLC_ECO57 (P0A902) Outer membrane lipoprotein blc precursor	29	6.2
41	YE7A_SCHPO (O14162) Hypothetical protein C4A8.10 in chromosome I	29	8.1
42	TNPE_STAAU (P37375) Transposase B from transposon PsiTn554	29	8.1
43	SLAP2_THET8 (P35830) S-layer protein precursor (P100 protein) (S...	29	8.1

>APOD_MOUSE (P51910) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
 Frame = -3

Query: 448 KEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAK------DTSFIQIYSRTPN 287
           K+  +S    L     P +P  PY +LATDY+NYA+V             F+ I  R P 
Sbjct: 95  KQSNVSEPAKLEVQFFPLMPPAPYWILATDYENYALVYSCTTFFWLFHVDFVWILGRNPY 154

Query: 286 PGPEFIEKYKSYAAGFGYDPSKIKDTPQ 203
             PE I   K      G D  K+  T Q
Sbjct: 155 LPPETITYLKDILTSNGIDIEKMTTTDQ 182

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>APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
 Frame = -3

Query: 397 FIPKLPYDVLATDYDNYAVVSGAK------DTSFIQIYSRTPNPGPEFIEKYKSYAAGFG 236
           F+P  PY +LATDY+NYA+V             F  I +R PN  PE ++  K+      
Sbjct: 112 FMPSAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNN 171

Query: 235 YDPSKIKDTPQ 203
            D  K+  T Q
Sbjct: 172 IDVKKMTVTDQ 182

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>PTGDS_MACFU (Q9TUI1) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 190

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
 Frame = -3

Query: 373 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           V+ TDYD+YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDHYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFSAFCKAQGFTEDSIVF 179

Query: 211 TPQDCEVSSDQ 179
            PQ  +  ++Q
Sbjct: 180 LPQTDKCMTEQ 190

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>PTGDS_HORSE (O97921) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 194

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
 Frame = -3

Query: 373 VLATDYDNYAVVS---------GAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 221
           V+ TDY+ YA++          G +D     +YSR  +P PE  EK+ ++A   G+    
Sbjct: 120 VVETDYEEYALLYTHAESTKGLGGQDFRMATLYSRVQSPRPEVKEKFSTFAKAQGFTEDA 179

Query: 220 IKDTPQ 203
           I   PQ
Sbjct: 180 IVFLPQ 185

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>PTGDS_PONPY (Q8WNM0) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 190

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -3

Query: 373 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           V+ TDYD YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179

Query: 211 TPQDCEVSSDQ 179
            PQ  +  ++Q
Sbjct: 180 LPQTDKCMTEQ 190

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>PTGDS_HUMAN (P41222) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS) (Beta-trace protein) (Cerebrin-28)
          Length = 190

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -3

Query: 373 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           V+ TDYD YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179

Query: 211 TPQDCEVSSDQ 179
            PQ  +  ++Q
Sbjct: 180 LPQTDKCMTEQ 190

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>PTGDS_GORGO (Q8WNM1) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 190

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -3

Query: 373 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           V+ TDYD YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179

Query: 211 TPQDCEVSSDQ 179
            PQ  +  ++Q
Sbjct: 180 LPQTDKCLTEQ 190

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>PTGDS_FELCA (Q29487) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = -3

Query: 373 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           V+ATDY+ YA++      S  +D     +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VVATDYEEYALLYTAGTKSPGQDFHMATLYSRTQTPRAEVKEKFSTFAKTRGFTEDAIVF 179

Query: 211 TPQ 203
            P+
Sbjct: 180 LPK 182

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>PTGDS_URSAR (Q29562) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 36.2 bits (82), Expect = 0.051
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
 Frame = -3

Query: 373 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           V  TDYD YA++  +G K    D     +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VAMTDYDEYALLYTTGTKGLGQDFHMATLYSRTQTPRAEIKEKFTTFAKTQGFTEDAIVF 179

Query: 211 TPQ 203
            PQ
Sbjct: 180 LPQ 182

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>PTGDS_CANFA (Q9XS65) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 36.2 bits (82), Expect = 0.051
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
 Frame = -3

Query: 373 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           V+AT+Y+ YA++  +G+K    D     +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VVATNYEEYALLYTAGSKGLGQDFHMATLYSRTQTPKAEIKEKFSTFAKTQGFTEDAIVF 179

Query: 211 TPQ 203
            PQ
Sbjct: 180 LPQ 182

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>APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 35.4 bits (80), Expect = 0.086
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
 Frame = -3

Query: 448 KEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAK------DTSFIQIYSRTPN 287
           K+  +S    L       +P  PY +LATDY++YA+V             ++ I  R P 
Sbjct: 95  KQSNMSEPAKLEVQFFSLMPPAPYWILATDYESYALVYSCTTFFWFFHVDYVWILGRNPY 154

Query: 286 PGPEFIEKYKSYAAGFGYDPSKIKDTPQ 203
             PE I   K        D +KI    Q
Sbjct: 155 LPPETITYLKYILTSNDIDIAKITTKDQ 182

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>APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
 Frame = -3

Query: 397 FIPKLPYDVLATDYDNYAVVSGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFG 236
           F+P  PY VLATDY+NYA+V             +  I +R  +   E ++  K+      
Sbjct: 112 FMPSAPYWVLATDYENYALVYSCVSIINLFRVDYAWILARNRHLPSETVDFLKNILTSNN 171

Query: 235 YDPSKIKDTPQD 200
            D  K+  T Q+
Sbjct: 172 IDVKKMTVTDQE 183

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>BLG4_BLAGE (P54962) Allergen Bla g 4 precursor (Bla g IV) (Fragment)|
          Length = 182

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 382 PYDVLATDYDNYAVVSG 332
           PY VLATDY+NYA+V G
Sbjct: 101 PYSVLATDYENYAIVEG 117

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>PTGDS_SHEEP (Q9XSM0) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = -3

Query: 373 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           V  TDY+ YA++          D+    +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VAETDYETYALLYTESVRGPGPDSLMATLYSRTQTPRAEVKEKFTTFARSLGFTEEGIVF 179

Query: 211 TPQ 203
            P+
Sbjct: 180 LPK 182

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>APOD_CAVPO (P51909) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = -3

Query: 394 IPKLPYDVLATDYDNYAVV 338
           +P  PY VLATDYDNYA+V
Sbjct: 113 MPSAPYWVLATDYDNYALV 131

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>EXFAB_COTJA (Q9I9P7) Extracellular fatty acid-binding protein precursor|
           (Ex-FABP) (Lipocalin Q83)
          Length = 178

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = -3

Query: 388 KLPYDVLATDYDNYAV-----VSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPS 224
           K   +VL TDY +YAV     V   +    +++YSR+P   P     ++  A    Y   
Sbjct: 103 KKKVEVLDTDYKSYAVIYATRVKDGRTLHMMRLYSRSPEVSPAATAIFRKLAGERNYTDE 162

Query: 223 KIKDTPQDCEVSSDQL 176
            +   P+  E + D++
Sbjct: 163 MVAMLPRQEECTVDEV 178

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>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2|
          Length = 1514

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -2

Query: 266  EVQVICCRLRLRPEQDQGHAAGLRGVLGPASADDVYARDGRGPD 135
            EVQ +C  L   P Q   H   +  VLGPA  D  + R  RGPD
Sbjct: 1449 EVQALCHHLATGPGQLSFHKGDILRVLGPARGD--WLRCSRGPD 1490

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>CRA2_HOMGA (P80007) Crustacyanin-A2 subunit|
          Length = 174

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -3

Query: 400 PFIPKLPYDVLATDYDNYAVVSGAKDT-----SFIQIYSRTPNPGPEFIEK 263
           P +   PY+V+ TDY+ Y+ V     T      F  ++SRTP      +EK
Sbjct: 96  PSVFAAPYEVIETDYETYSCVYSCITTDNYKSEFAFVFSRTPQTSGPAVEK 146

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>NHR18_CAEEL (O16360) Nuclear hormone receptor family member nhr-18|
          Length = 394

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = -3

Query: 499 VQCLSQEDMASAETDLEKEEMIS-SKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAKD 323
           + C   +  +  +T ++   +++ ++  L+ PT   +P    + LAT  DN   V   K+
Sbjct: 107 ILCCEPDRASVLKTTIDVTRLVNIARDMLQKPTNHVLPSNSLEQLATTLDNMRCVESNKE 166

Query: 322 TSFIQIYSRTPNPGPEFIEKYKSYAAGF 239
             FI+ Y +        +E  KS+  GF
Sbjct: 167 VKFIEKYGK--------VETLKSWEQGF 186

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>PTGDS_PIG (Q29095) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 189

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
 Frame = -3

Query: 385 LPYDVLATDYDNYAVVSGAKDTS------FIQIYSRTPNPGPEFIEKYKSYAAGFGYDPS 224
           L   V+ TDY NYA++      S         +YSR+  PG    EK+ ++A   G+   
Sbjct: 114 LEVSVVETDYKNYALLHTESGPSPGPAFRMATLYSRSQAPGAAVREKFTAFAKARGFTED 173

Query: 223 KIKDTPQD 200
            I   P++
Sbjct: 174 GIVFLPRN 181

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>PTGDS_BOVIN (O02853) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = -3

Query: 373 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           V  TDY+ YA++         +D     +YSR+ NP  E  E + ++A   G+    I  
Sbjct: 120 VAETDYETYALLYTEGVRGPGQDFRMATLYSRSQNPRAEVKEHFTTFAKSLGFTEEGIVF 179

Query: 211 TPQ 203
            P+
Sbjct: 180 LPK 182

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>APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -3

Query: 490 LSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 338
           ++Q +  + +++L +   +  K F   PT P      Y VLATDY+NYA+V
Sbjct: 88  VNQIEGQATQSNLTEPAKLGVKFFQLMPTAP------YWVLATDYENYALV 132

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>LAZA_SCHAM (P49291) Lazarillo protein precursor|
          Length = 214

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
 Frame = -3

Query: 427 KCFLRFPTLPFIPKLPYDVLATDYDNYAVV-------SGAKDTSFIQIYSRTPNPGPEFI 269
           K  + FP  P +    Y +L+TDYDNY++V         A  T    I  R+ N     +
Sbjct: 107 KLSVHFPNSPSVGN--YWILSTDYDNYSIVWSCVKRPDSAASTEISWILLRSRNSSNMTL 164

Query: 268 EKYKSYAAGFGYDPSKIKDTPQDCE 194
           E+ +        D +K   T Q  +
Sbjct: 165 ERVEDELKNLQLDLNKYTKTEQSAK 189

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>ISW1_YEAST (P38144) Chromatin remodelling complex ATPase chain ISW1 (EC 3.6.1.-)|
          Length = 1129

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
 Frame = -3

Query: 361  DYDNYAVVSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQDCEVSSD 182
            ++  +  VSG    + IQ  +R   PG + +E+ ++YA  F  +  +I+D  +  ++  +
Sbjct: 891  EFRKFITVSGKYGRNSIQAIARELAPG-KTLEEVRAYAKAFWSNIERIEDYEKYLKIIEN 949

Query: 181  QLAQMMSMPGMDEAL-------TNQFPDLKLK 107
            +  ++  +    EAL        N F DLKLK
Sbjct: 950  EEEKIKRVKMQQEALRRKLSEYKNPFFDLKLK 981

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>PURP_CHICK (P08938) Purpurin precursor|
          Length = 196

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
 Frame = -3

Query: 379 YDVLATDYDNYAVV--------SGAKDTSFIQIYSRTPNPGPEFIEK 263
           Y V+ TDYDNYA+          G+ D  +  I+SR P   P  I++
Sbjct: 126 YWVIDTDYDNYAITYACRSLKEDGSCDDGYSLIFSRNPRGLPPAIQR 172

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>VL2_HPV55 (Q80939) Minor capsid protein L2|
          Length = 460

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
 Frame = -3

Query: 382 PYDVLATDYDNYAVVSGAKDTSFIQIYSRTPNPGPEFIEK--YKSYAAGFGYDPSKIKDT 209
           P    A + + + +V+ A DTS   IY+    P P+F E+    S++    +  S +  T
Sbjct: 326 PISAAAEEIELHPLVATAHDTSLFDIYA---EPDPDFTEEPVPLSFSTSTPFQRSSVSAT 382

Query: 208 PQDCEVSSDQLAQMMSMPGMDEALTNQFPDLKLKSSVAFDPFTSVTQTL 62
           P             +S+PG  +      PD+   ++    P++ VT  L
Sbjct: 383 PW------GNTTVPLSLPG--DMFVQPGPDIIFPTASTTTPYSPVTPAL 423

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>CRC1_HOMGA (P80029) Crustacyanin-C1 subunit|
          Length = 181

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = -3

Query: 382 PYDVLATDYDNYAVVSGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 221
           P  +L TDY NYA +    D      + F  I+SR+ N   ++++K ++       D ++
Sbjct: 104 PLVILETDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTR 163

Query: 220 IKDTPQ 203
              T Q
Sbjct: 164 FVKTVQ 169

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>CRA1_HOMGA (P58989) Crustacyanin-A1 subunit|
          Length = 181

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = -3

Query: 382 PYDVLATDYDNYAVVSGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 221
           P  +L TDY NYA +    D      + F  I+SR+ N   ++++K ++       D ++
Sbjct: 104 PLVILETDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTR 163

Query: 220 IKDTPQ 203
              T Q
Sbjct: 164 FVKTVQ 169

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>MFRP_MOUSE (Q8K480) Membrane frizzled-related protein (Membrane-type|
           frizzled-related protein)
          Length = 584

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 16/86 (18%)
 Frame = +3

Query: 24  VCVYLKYTSASFFRVWVTLVNGSNATDDLS----------------FRSGNWFVRASSIP 155
           +C+ L Y + +F  +WV L   +  TD L                 F  G    R +S+ 
Sbjct: 478 MCLGLSYNTTAFPNIWVGLATQTEVTDILRGYKSLTSLPCYQTFQRFLCGLLVPRCTSLG 537

Query: 156 GIDIICASWSEDTSQSCGVSLILLGS 233
            I   C S  +   Q C  SL LLG+
Sbjct: 538 TILPPCRSVCQAAEQQCQSSLALLGT 563

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>NGAL_MOUSE (P11672) Neutrophil gelatinase-associated lipocalin precursor|
           (NGAL) (p25) (SV-40-induced 24P3 protein) (Lipocalin-2)
          Length = 200

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
 Frame = -3

Query: 400 PFIPKLPYDVLATDYDNYAVV-----SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFG 236
           P +      V  TDY+ +A+V     S  K    I +Y RT    PE  E++  +A   G
Sbjct: 123 PQVQSYNVQVATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKSLG 182

Query: 235 Y-DPSKIKDTPQD 200
             D + I   P D
Sbjct: 183 LKDDNIIFSVPTD 195

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>MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) (Proteolipid|
           protein-binding protein) (PLPB1)
          Length = 1121

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 146 RGPDKPVPGPEAQVVGRVRPVHERDPDPEEARRSV 42
           RGP+ P P PE  V+  VR   ++D D    + +V
Sbjct: 329 RGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTV 363

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>FOS_CHICK (P11939) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 367

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = -2

Query: 230 PEQDQGHAAGLRGVLGPASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEAR 51
           P Q++GH  G+     PA+    Y+R         PG   Q +GR   V +  P+ EE R
Sbjct: 87  PSQNRGHPYGVPAPAPPAA----YSRPAV---LKAPGGRGQSIGRRGKVEQLSPEEEEKR 139

Query: 50  R 48
           R
Sbjct: 140 R 140

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>FOS_PIG (O97930) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 380

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 182 PASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEARR 48
           P  +   Y+R   G  K +PG  AQ +GR   V +  P+ EE RR
Sbjct: 99  PTPSAGAYSR--AGAVKTMPGGRAQSIGRRGKVEQLSPEEEEKRR 141

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>EXFAB_CHICK (P21760) Extracellular fatty acid-binding protein precursor|
           (Ex-FABP) (Quiescence-specific protein) (p20K) (Ch21
           protein)
          Length = 178

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = -3

Query: 376 DVLATDYDNYAV-----VSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 212
           +VL TDY +YAV     V   +    +++YSR+    P  +  ++  A    Y    +  
Sbjct: 107 EVLDTDYKSYAVIFATRVKDGRTLHMMRLYSRSREVSPTAMAIFRKLARERNYTDEMVAV 166

Query: 211 TPQDCEVSSDQL 176
            P   E S D++
Sbjct: 167 LPSQEECSVDEV 178

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>FOS_AVINK (P23050) p55-v-Fos transforming protein|
          Length = 322

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = -2

Query: 230 PEQDQGHAAGLRGVLGPASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEAR 51
           P Q++GH  G+     PA+    Y+R         PG   Q +GR   V +  P+ EE R
Sbjct: 42  PSQNRGHPYGVPAPAPPAA----YSRPAV---LKAPGGRGQSIGRRGKVEQLSPEEEEKR 94

Query: 50  R 48
           R
Sbjct: 95  R 95

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>YAN4_SCHPO (Q10070) Hypothetical protein C3H1.04c in chromosome I|
          Length = 601

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = -3

Query: 490 LSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGA-----K 326
           +S    AS +  L K+ ++ S  F  FPTLP        + A +  N  ++S       K
Sbjct: 22  ISYHVRASTQNALLKQTVLQSSSFKSFPTLP-------RLAARNISNSGILSRTTPVIIK 74

Query: 325 DTSFIQIYSRTPNPGPEFIEKYKS 254
             S ++ YS      PE + K +S
Sbjct: 75  QISMVRSYSSGDVENPEILNKNES 98

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>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2|
          Length = 1516

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -2

Query: 266  EVQVICCRLRLRPEQDQGHAAGLRGVLGPASADDVYARDGRGPD 135
            EVQ +C  L   P Q   H   +  VLG A  D  + R  RGPD
Sbjct: 1451 EVQALCHHLATGPGQLSFHKGDILRVLGRAGGD--WLRCSRGPD 1492

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>MUP3_MOUSE (P04939) Major urinary protein 3 precursor (MUP 3) (Non-group|
           1/group 2 MUP15)
          Length = 184

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
 Frame = -3

Query: 379 YDVLATDYDNYAVV-----SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIK 215
           + +L TDYDNY ++        K    +++Y R P+   +  EK+       G     I 
Sbjct: 112 FSILKTDYDNYIMIHLINKKDGKTFQLMELYGREPDLSLDIKEKFAKLCEEHGIIRENII 171

Query: 214 D 212
           D
Sbjct: 172 D 172

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>BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -3

Query: 379 YDVLATDYD-NYAVVSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 221
           Y+V+A D +  +A+V G  D  ++ I SRTP    E  ++  + A   G+D SK
Sbjct: 116 YNVIALDREYRHALVCGP-DRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168

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>BLC_ECO57 (P0A902) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -3

Query: 379 YDVLATDYD-NYAVVSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 221
           Y+V+A D +  +A+V G  D  ++ I SRTP    E  ++  + A   G+D SK
Sbjct: 116 YNVIALDREYRHALVCGP-DRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168

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>YE7A_SCHPO (O14162) Hypothetical protein C4A8.10 in chromosome I|
          Length = 723

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
 Frame = -3

Query: 310 QIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQDCEVSSDQLAQMMSMP---GMDEA 140
           +I++ +   G  F +  KS+   F Y  SK  DT      + D+ A+  + P   G DE 
Sbjct: 492 KIHASSEESGSSFSKALKSFVGLFSYSASKTTDTEIPLVKNEDENARKPTEPNCLGSDEL 551

Query: 139 LTNQFPDLKLKSSVAFDPFTSVTQTLKKLAEVY 41
             +   +    S+   DP ++ +   +++   +
Sbjct: 552 DVSNSSNQFFCSAPKLDPTSTFSGVAQRVVNTF 584

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>TNPE_STAAU (P37375) Transposase B from transposon PsiTn554|
          Length = 630

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 16/142 (11%)
 Frame = -3

Query: 418 LRFPTLPFIPKLPYDVLATDYDNYAVVSGAKDTSFIQIYSRTPNPGP------------- 278
           L++P++  I ++P D   T+Y  Y    G + T+     +      P             
Sbjct: 108 LKYPSITSITEVPIDKAMTEYRTYLTKQGVRITTTNYKITANQEKTPVKANSYYVTNLKQ 167

Query: 277 --EFIEKYKSYAAGFGYDPSKIKDTP-QDCEVSSDQLAQMMSMPGMDEALTNQFPDLKLK 107
             EFIE +      +  D    ++ P  D +V+  Q    ++  G       Q      K
Sbjct: 168 FIEFIEDFYFDGEEWDKDVWDRRNLPLPDDKVNPTQYEYTINFKGFRNTYFKQLVKRYCK 227

Query: 106 SSVAFDPFTSVTQTLKKLAEVY 41
             +  D F+ V+   +KL E +
Sbjct: 228 LRLNMDSFSYVSDIAQKLKEFF 249

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>SLAP2_THET8 (P35830) S-layer protein precursor (P100 protein) (Surface layer|
           protein)
          Length = 917

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -3

Query: 238 GYDPSKIKDTPQDCEVSSDQL-AQMMSMPGMDEALTNQFPDLKLKSSVAFDPFTSVTQTL 62
           G  P+     P+D E    +L AQ M  PGMD+A      D    +S+A D   +  Q L
Sbjct: 85  GTSPTMEALAPEDLEAMIAELKAQPMPEPGMDQAALKDLMDRVEAASIAADTALAQAQQL 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,327,365
Number of Sequences: 219361
Number of extensions: 1269976
Number of successful extensions: 4412
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4384
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result