| Clone Name | rbaal26b05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL606609.2|OSJN00064 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K24, complete sequence Length = 121799 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 82 atacataaatttgagattgcaaa 104 ||||||||||||||||||||||| Sbjct: 86982 atacataaatttgagattgcaaa 87004
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 82 atacataaatttgagattgcaaa 104 ||||||||||||||||||||||| Sbjct: 1307016 atacataaatttgagattgcaaa 1307038
>emb|AL662940.3|OSJN00142 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0035A12, complete sequence Length = 130499 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 82 atacataaatttgagattgcaaa 104 ||||||||||||||||||||||| Sbjct: 9979 atacataaatttgagattgcaaa 10001
>emb|AL935115.6| Zebrafish DNA sequence from clone CH211-199D18, complete sequence Length = 187326 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 tgaaataaaaacacatgaatta 239 |||||||||||||||||||||| Sbjct: 41159 tgaaataaaaacacatgaatta 41138
>gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat receptor-like kinase gene cluster, complete sequence; ternary complex factor MIP1-like gene, complete cds; putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 94077 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 atctttttttttggcgaaaag 270 ||||||||||||||||||||| Sbjct: 34223 atctttttttttggcgaaaag 34203
>gb|AY730046.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat receptor-like kinase genes, complete cds Length = 42445 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 atctttttttttggcgaaaag 270 ||||||||||||||||||||| Sbjct: 33728 atctttttttttggcgaaaag 33708
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 aaaatctacacaaacatgaaa 222 ||||||||||||||||||||| Sbjct: 88148 aaaatctacacaaacatgaaa 88128
>gb|AC127546.4| Mus musculus BAC clone RP24-485N8 from chromosome 7, complete sequence Length = 151861 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 624 gaagctggctggtgaggtgga 644 ||||||||||||||||||||| Sbjct: 28908 gaagctggctggtgaggtgga 28888
>gb|AC133502.4| Mus musculus chromosome 7 clone RP24-290G20, complete sequence Length = 160238 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 624 gaagctggctggtgaggtgga 644 ||||||||||||||||||||| Sbjct: 17930 gaagctggctggtgaggtgga 17950
>gb|AC018977.9| Homo sapiens chromosome 10 clone RP11-386C23, complete sequence Length = 222810 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 aaaattgcaaatctccaaatg 322 ||||||||||||||||||||| Sbjct: 26129 aaaattgcaaatctccaaatg 26109
>emb|AL162614.25| Human DNA sequence from clone RP1-220G17 on chromosome 11p12-14.1, complete sequence Length = 93100 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 211 acaaacatgaaataaaaacacatgaatta 239 |||||||||||||||| ||||| |||||| Sbjct: 50202 acaaacatgaaataaatacacaggaatta 50174
>emb|AL050321.11|HSJ717M23 Human DNA sequence from clone RP4-717M23 on chromosome 20 Contains the CSRP2BP gene for CSRP2 binding protein, a chromosome 7 open reading frame 24 (C7orf24) pseudogene and two CpG islands, complete sequence Length = 101589 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 caacaacaatctttttttttg 262 ||||||||||||||||||||| Sbjct: 85908 caacaacaatctttttttttg 85888
>gb|AC121799.5| Mus musculus BAC clone RP23-429M22 from chromosome 1, complete sequence Length = 212595 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 acacaaacatgaaataaaaacacat 233 |||||||||| |||||||||||||| Sbjct: 158604 acacaaacataaaataaaaacacat 158628
>emb|AJ438576.1|SSC438576 Saimiri sciureus sciureus Sasc-31 gene for MHC class I antigen, exons 1-8 Length = 4023 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 ctctgcggggaggagcgaagg 562 ||||||||||||||||||||| Sbjct: 622 ctctgcggggaggagcgaagg 642
>gb|AC079331.11| Homo sapiens chromosome 17, clone RP11-360N9, complete sequence Length = 182535 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 catgaaataaaaacacatgaa 236 ||||||||||||||||||||| Sbjct: 44186 catgaaataaaaacacatgaa 44166
>gb|AC012558.9| Homo sapiens chromosome 10 clone RP11-174J11, complete sequence Length = 179391 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 aaaattgcaaatctccaaatg 322 ||||||||||||||||||||| Sbjct: 119645 aaaattgcaaatctccaaatg 119625
>gb|AC091165.15| Homo sapiens chromosome 8, clone RP11-366G13, complete sequence Length = 188456 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 aaggaagatacattggaaata 84 ||||||||||||||||||||| Sbjct: 88295 aaggaagatacattggaaata 88275
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 aaaatctacacaaacatgaaa 222 ||||||||||||||||||||| Sbjct: 19628249 aaaatctacacaaacatgaaa 19628229
>gb|AC131254.5| Homo sapiens chromosome 8, clone RP11-94H18, complete sequence Length = 153000 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 aaggaagatacattggaaata 84 ||||||||||||||||||||| Sbjct: 119857 aaggaagatacattggaaata 119877
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 208 tacacaaacatgaaataaaaacacatgaa 236 |||| ||||||||||| |||||||||||| Sbjct: 38465 tacaaaaacatgaaatcaaaacacatgaa 38493
>gb|AC006534.10| Homo sapiens chromosome 17, clone RP11-557B23, complete sequence Length = 216789 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 catgaaataaaaacacatgaa 236 ||||||||||||||||||||| Sbjct: 36816 catgaaataaaaacacatgaa 36836
>ref|XM_523606.1| PREDICTED: Pan troglodytes similar to cardiomyopathy associated 4; striated muscle UNC45 (LOC468215), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 1576 gtgctgctctgcggggagga 1595
>ref|XM_631665.1| Dictyostelium discoideum hypothetical protein (DDB0219339), partial mRNA Length = 7596 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 tgaattacacaacaacaatctttt 256 ||||||||| |||||||||||||| Sbjct: 4751 tgaattacaaaacaacaatctttt 4728
>gb|AC152828.1| Ornithorhynchus anatinus chromosome UNK clone OABb-462A1, complete sequence Length = 146407 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 acaaacatgaaataaaaaca 230 |||||||||||||||||||| Sbjct: 62795 acaaacatgaaataaaaaca 62776
>gb|AC166159.2| Mus musculus BAC clone RP24-129B16 from chromosome 15, complete sequence Length = 216481 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 taaaattgcaaatctccaaa 320 |||||||||||||||||||| Sbjct: 91148 taaaattgcaaatctccaaa 91129
>gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, complete sequence Length = 195530 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 acacaaacatgaaataaaaa 228 |||||||||||||||||||| Sbjct: 6413 acacaaacatgaaataaaaa 6394
>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence Length = 177245 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aaaatctacacaaacatgaa 221 |||||||||||||||||||| Sbjct: 19897 aaaatctacacaaacatgaa 19878
>gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosome 13, complete sequence Length = 189556 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 atacattggaaatacataaa 90 |||||||||||||||||||| Sbjct: 826 atacattggaaatacataaa 807
>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence Length = 177843 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aaacatgaaataaaaacaca 232 |||||||||||||||||||| Sbjct: 99729 aaacatgaaataaaaacaca 99748
>gb|BC081513.1| Danio rerio cDNA clone IMAGE:7263329, partial cds Length = 799 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 aaattgcaaatctccaaatgtggg 326 ||||||||||||| |||||||||| Sbjct: 550 aaattgcaaatctgcaaatgtggg 573
>ref|NM_178788.2| Mus musculus dCMP deaminase (Dctd), mRNA Length = 2053 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 atgaaataaaaacacatgaa 236 |||||||||||||||||||| Sbjct: 1956 atgaaataaaaacacatgaa 1937
>ref|NM_001040320.1| Danio rerio zgc:136389 (zgc:136389), mRNA Length = 948 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 aaattgcaaatctccaaatgtggg 326 ||||||||||||| |||||||||| Sbjct: 695 aaattgcaaatctgcaaatgtggg 718
>gb|AC163995.4| Mus musculus chromosome 5, clone RP24-242C19, complete sequence Length = 177877 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 acacaaacatgaaataaaaa 228 |||||||||||||||||||| Sbjct: 129207 acacaaacatgaaataaaaa 129188
>gb|AC164559.3| Mus musculus BAC clone RP23-198H17 from chromosome 6, complete sequence Length = 194636 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tctacacaaacatgaaataa 225 |||||||||||||||||||| Sbjct: 189250 tctacacaaacatgaaataa 189231
>gb|AC132424.3| Mus musculus BAC clone RP23-310P13 from chromosome 15, complete sequence Length = 199655 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 taaaattgcaaatctccaaa 320 |||||||||||||||||||| Sbjct: 9074 taaaattgcaaatctccaaa 9093
>emb|CR925863.7| Zebrafish DNA sequence from clone DKEY-184N1 in linkage group 8, complete sequence Length = 134388 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 taaatttgagattgcaaaat 106 |||||||||||||||||||| Sbjct: 10970 taaatttgagattgcaaaat 10989
>gb|AC127267.3| Mus musculus BAC clone RP23-401H14 from chromosome 6, complete sequence Length = 186704 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tctacacaaacatgaaataa 225 |||||||||||||||||||| Sbjct: 140544 tctacacaaacatgaaataa 140525
>gb|BC031719.1| Mus musculus dCMP deaminase, mRNA (cDNA clone MGC:25698 IMAGE:3672932), complete cds Length = 1923 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 atgaaataaaaacacatgaa 236 |||||||||||||||||||| Sbjct: 1769 atgaaataaaaacacatgaa 1750
>gb|BC093242.1| Danio rerio similar to Serum amyloid P-component precursor (SAP), mRNA (cDNA clone IMAGE:7431391), partial cds Length = 870 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 aaattgcaaatctccaaatgtggg 326 ||||||||||||| |||||||||| Sbjct: 552 aaattgcaaatctgcaaatgtggg 575
>gb|BC115109.1| Danio rerio cDNA clone MGC:136389 IMAGE:7252397, complete cds Length = 948 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 aaattgcaaatctccaaatgtggg 326 ||||||||||||| |||||||||| Sbjct: 695 aaattgcaaatctgcaaatgtggg 718
>emb|AL022161.1|HS380C13 Human DNA sequence from clone RP3-380C13 on chromosome Xq22.1-22.3 Contains a calmodulin 2 (phosphorylase kinase, delta) (CALM2) pseudogene, complete sequence Length = 139444 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 aaataaaaacacatgaatta 239 |||||||||||||||||||| Sbjct: 131261 aaataaaaacacatgaatta 131280
>ref|XM_969251.1| PREDICTED: Tribolium castaneum similar to fibrillin 2 precursor (LOC663193), mRNA Length = 8778 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cacaacaacaatcttttttt 259 |||||||||||||||||||| Sbjct: 1081 cacaacaacaatcttttttt 1062
>emb|CR933001.12| Zebrafish DNA sequence from clone DKEY-158B11 in linkage group 5, complete sequence Length = 158802 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 taaaatctacacaaacatgaaataaaaa 228 ||||||||||| ||||||| |||||||| Sbjct: 86889 taaaatctacataaacatgtaataaaaa 86916
>emb|AL672010.8| Mouse DNA sequence from clone RP23-223C15 on chromosome 11 Contains three novel genes and a CpG island, complete sequence Length = 193223 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 caaacatgaaataaaaacac 231 |||||||||||||||||||| Sbjct: 11599 caaacatgaaataaaaacac 11580
>gb|AC134399.12| Mus musculus chromosome 5, clone RP24-282I19, complete sequence Length = 155228 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 acacaaacatgaaataaaaa 228 |||||||||||||||||||| Sbjct: 66165 acacaaacatgaaataaaaa 66184
>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence Length = 98660 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 aaaatctacacaaacatgaa 221 |||||||||||||||||||| Sbjct: 58805 aaaatctacacaaacatgaa 58824
>gb|U55370.1| Caenorhabditis elegans cosmid K03B4, complete sequence Length = 32403 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 atctttttttttggcgaaaa 269 |||||||||||||||||||| Sbjct: 6684 atctttttttttggcgaaaa 6665
>gb|AC022706.7| Homo sapiens chromosome , clone RP11-47L3, complete sequence Length = 162474 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 11092 gtgctgctctgcggggagga 11111
>ref|NM_173167.2| Homo sapiens unc-45 homolog B (C. elegans) (UNC45B), transcript variant 1, mRNA Length = 5694 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 2525 gtgctgctctgcggggagga 2544
>ref|NM_001033576.1| Homo sapiens unc-45 homolog B (C. elegans) (UNC45B), transcript variant 2, mRNA Length = 5688 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 2519 gtgctgctctgcggggagga 2538
>gb|AC093689.4| Homo sapiens BAC clone RP11-725M22 from 4, complete sequence Length = 167590 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cattggaaatacataaattt 93 |||||||||||||||||||| Sbjct: 150376 cattggaaatacataaattt 150395
>gb|AC116618.4| Homo sapiens BAC clone RP11-98L17 from 4, complete sequence Length = 153040 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 tcaactaaaatctacacaaa 215 |||||||||||||||||||| Sbjct: 12525 tcaactaaaatctacacaaa 12544
>gb|AC073174.5| Homo sapiens chromosome 10 clone RP11-319F12, complete sequence Length = 161551 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 acatgaaataaaaacacatg 234 |||||||||||||||||||| Sbjct: 122376 acatgaaataaaaacacatg 122395
>gb|AC093749.3| Homo sapiens BAC clone RP11-30B7 from 4, complete sequence Length = 163102 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tcaactaaaatctacacaaa 215 |||||||||||||||||||| Sbjct: 87355 tcaactaaaatctacacaaa 87336
>gb|AC104300.2| Homo sapiens chromosome 3 clone RP11-147N17, complete sequence Length = 156024 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tgagattgcaaaatagcctg 112 |||||||||||||||||||| Sbjct: 49826 tgagattgcaaaatagcctg 49845
>ref|XM_694014.1| PREDICTED: Danio rerio similar to Serum amyloid P-component precursor (SAP) (LOC570524), mRNA Length = 1029 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 aaattgcaaatctccaaatgtggg 326 ||||||||||||| |||||||||| Sbjct: 872 aaattgcaaatctgcaaatgtggg 895
>gb|AC022916.11| Homo sapiens chromosome 17, clone RP11-799D4, complete sequence Length = 215786 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 150461 gtgctgctctgcggggagga 150480
>dbj|AK171894.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830018C18 product:dCMP deaminase, full insert sequence Length = 2493 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 atgaaataaaaacacatgaa 236 |||||||||||||||||||| Sbjct: 2393 atgaaataaaaacacatgaa 2374
>gb|AC127346.4| Mus musculus BAC clone RP23-54F4 from chromosome 6, complete sequence Length = 203187 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tctacacaaacatgaaataa 225 |||||||||||||||||||| Sbjct: 1255 tctacacaaacatgaaataa 1236
>dbj|AK077663.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730512H23 product:DEOXYCYTIDYLATE DEAMINASE (EC 3.5.4.12) (DCMP DEAMINASE) homolog [Homo sapiens], full insert sequence Length = 2053 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 atgaaataaaaacacatgaa 236 |||||||||||||||||||| Sbjct: 1956 atgaaataaaaacacatgaa 1937
>dbj|AK039066.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230092D16 product:deoxycytidylate deaminase homolog [Homo sapiens], full insert sequence Length = 1884 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 atgaaataaaaacacatgaa 236 |||||||||||||||||||| Sbjct: 1784 atgaaataaaaacacatgaa 1765
>emb|AL672153.3| Mouse DNA sequence from clone RP23-8C14 on chromosome 2, complete sequence Length = 137628 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 caaacatgaaataaaaacac 231 |||||||||||||||||||| Sbjct: 31458 caaacatgaaataaaaacac 31477
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tctttttttttggcgaaaag 270 |||||||||||||||||||| Sbjct: 19614326 tctttttttttggcgaaaag 19614345
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ctccagccggccgaatcaat 431 |||||||||||||||||||| Sbjct: 14247707 ctccagccggccgaatcaat 14247688
>gb|AY168008.1| Sphoeroides nephelus dlx1/dlx2 intergenic region, partial sequence Length = 5358 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 attggaaatacataaatttgagat 98 |||||||||||||||||| ||||| Sbjct: 3674 attggaaatacataaattggagat 3651
>gb|BC095616.1| Danio rerio cDNA clone IMAGE:7250490, partial cds Length = 788 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 aaattgcaaatctccaaatgtggg 326 ||||||||||||| |||||||||| Sbjct: 481 aaattgcaaatctgcaaatgtggg 504
>gb|AF539794.1| Homo sapiens striated muscle UNC45 (UNC45) mRNA, complete cds Length = 2796 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 2428 gtgctgctctgcggggagga 2447
>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O02 Length = 176625 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ctccagccggccgaatcaat 431 |||||||||||||||||||| Sbjct: 91171 ctccagccggccgaatcaat 91152
>emb|AL929027.10| Mouse DNA sequence from clone RP23-217F24 on chromosome 2, complete sequence Length = 174282 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aaacatgaaataaaaacaca 232 |||||||||||||||||||| Sbjct: 142005 aaacatgaaataaaaacaca 142024
>emb|BX647642.1|HSM807788 Homo sapiens mRNA; cDNA DKFZp451P086 (from clone DKFZp451P086) Length = 5686 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 2519 gtgctgctctgcggggagga 2538
>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0042B03 Length = 167669 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tctttttttttggcgaaaag 270 |||||||||||||||||||| Sbjct: 89886 tctttttttttggcgaaaag 89905
>gb|AC146871.3| Xenopus tropicalis clone CH216-38E19, complete sequence Length = 163001 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 aaacatgaaataaaaacaca 232 |||||||||||||||||||| Sbjct: 73773 aaacatgaaataaaaacaca 73754
>emb|AL732544.12| Zebrafish DNA sequence from clone BUSM1-6I1 in linkage group 7, complete sequence Length = 135141 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ctacacaaacatgaaataaa 226 |||||||||||||||||||| Sbjct: 67280 ctacacaaacatgaaataaa 67299
>gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, complete sequence Length = 174120 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 atgaaataaaaacacatgaa 236 |||||||||||||||||||| Sbjct: 105296 atgaaataaaaacacatgaa 105315
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 gaaataaaaacacatgaattacac 242 ||||| |||||||||||||||||| Sbjct: 205683 gaaatgaaaacacatgaattacac 205706
>dbj|AP001150.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-778O17, complete sequence Length = 157282 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 caacaacaatcttttttttt 261 |||||||||||||||||||| Sbjct: 91201 caacaacaatcttttttttt 91182
>emb|BX001030.7| Zebrafish DNA sequence from clone CH211-234P6 in linkage group 24, complete sequence Length = 156560 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 aaattgcaaatctccaaatgtggg 326 ||||||||||||| |||||||||| Sbjct: 97011 aaattgcaaatctgcaaatgtggg 97034
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 atcaactaaaatctacacaaacat 218 |||||||||||||| ||||||||| Sbjct: 1311297 atcaactaaaatctccacaaacat 1311274
>gb|BC101062.2| Homo sapiens unc-45 homolog B (C. elegans), mRNA (cDNA clone MGC:119540 IMAGE:40008186), complete cds Length = 2553 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 2185 gtgctgctctgcggggagga 2204
>gb|AC142109.4| Mus musculus BAC clone RP24-96D16 from chromosome 15, complete sequence Length = 148041 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 taaaattgcaaatctccaaa 320 |||||||||||||||||||| Sbjct: 42657 taaaattgcaaatctccaaa 42676
>gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, complete sequence Length = 188473 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 atacattggaaatacataaa 90 |||||||||||||||||||| Sbjct: 143123 atacattggaaatacataaa 143104
>gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromosome unknown, complete sequence Length = 228494 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 accttttgctttggagatgc 366 |||||||||||||||||||| Sbjct: 181792 accttttgctttggagatgc 181773
>gb|AC157951.2| Gallus gallus BAC clone CH261-173J5 from chromosome unknown, complete sequence Length = 206432 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 accttttgctttggagatgc 366 |||||||||||||||||||| Sbjct: 155534 accttttgctttggagatgc 155553
>gb|BC101063.2| Homo sapiens unc-45 homolog B (C. elegans), transcript variant 2, mRNA (cDNA clone MGC:119541 IMAGE:40008187), complete cds Length = 2790 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 2422 gtgctgctctgcggggagga 2441
>gb|AC120789.12| Mus musculus chromosome 8, clone RP23-441F24, complete sequence Length = 204013 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 atgaaataaaaacacatgaa 236 |||||||||||||||||||| Sbjct: 11844 atgaaataaaaacacatgaa 11863
>gb|AC161877.5| Mus musculus BAC clone RP23-350G11 from chromosome 14, complete sequence Length = 227413 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tgattcaatagatgggggag 466 |||||||||||||||||||| Sbjct: 204368 tgattcaatagatgggggag 204349
>emb|AL833281.1|HSM804594 Homo sapiens mRNA; cDNA DKFZp451I048 (from clone DKFZp451I048) Length = 5651 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 2492 gtgctgctctgcggggagga 2511
>emb|AL832355.1|HSM803663 Homo sapiens mRNA; cDNA DKFZp451E226 (from clone DKFZp451E226) Length = 5684 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 gtgctgctctgcggggagga 555 |||||||||||||||||||| Sbjct: 2513 gtgctgctctgcggggagga 2532 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,047,224 Number of Sequences: 3902068 Number of extensions: 8047224 Number of successful extensions: 143226 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 142821 Number of HSP's gapped (non-prelim): 405 length of query: 673 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 650 effective length of database: 17,143,297,704 effective search space: 11143143507600 effective search space used: 11143143507600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)