ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal25m03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DLTA_BACSU (P39581) D-alanine--poly(phosphoribitol) ligase subun... 33 0.38
2NADD_BUCAP (Q8K9B7) Probable nicotinate-nucleotide adenylyltrans... 31 1.9
3HUTH_CAEEL (Q20502) Probable histidine ammonia-lyase (EC 4.3.1.3... 30 5.6
4PTK2_CANGA (Q6FRE7) Serine/threonine-protein kinase PTK2 (EC 2.7... 30 5.6
5Y4WF_RHISN (P55684) Hypothetical 37.7 kDa protein y4wF 29 7.3
6I12R2_HUMAN (Q99665) Interleukin-12 receptor beta-2 chain precur... 29 9.5

>DLTA_BACSU (P39581) D-alanine--poly(phosphoribitol) ligase subunit 1 (EC|
           6.1.1.13) (D-alanine-activating enzyme) (DAE)
           (D-alanine-D-alanyl carrier protein ligase) (DCL)
          Length = 503

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -1

Query: 218 KLFMSAAEFARSLSIYTVFLCLRCGGMLYCV 126
           K+F++ A F+  LS+  ++ CL+ GG L+CV
Sbjct: 185 KIFLNQAPFSFDLSVMDLYPCLQSGGTLHCV 215



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>NADD_BUCAP (Q8K9B7) Probable nicotinate-nucleotide adenylyltransferase (EC|
           2.7.7.18) (Deamido-NAD(+) pyrophosphorylase)
           (Deamido-NAD(+) diphosphorylase) (Nicotinate
           mononucleotide adenylyltransferase) (NaMN
           adenylyltransferase)
          Length = 216

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142 PPHRKHKKTVYIDKLLANSAALMNNFSGAAHDRVELSPLQSSTAKSHSTGYGVRLYPKSK 321
           PPHR   KT  ID+L     A+ +N         +L  +     K ++T Y +    K +
Sbjct: 43  PPHRSKTKTSIIDRLKMIKFAIKDN---------KLFTISYLETKKNTTFYTIETLKKIR 93

Query: 322 RKI-YISPL 345
           +KI Y+ PL
Sbjct: 94  KKIGYLQPL 102



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>HUTH_CAEEL (Q20502) Probable histidine ammonia-lyase (EC 4.3.1.3) (Histidase)|
          Length = 677

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
 Frame = +1

Query: 151 RKHKKTVYIDKLLANSAAL------MNNFSGAAHDRVELSPLQSSTAKSHSTGYGVRLYP 312
           R  K   +++K+ +   A+         FS       +L  LQ +  +SH+TGYG  L P
Sbjct: 161 RIRKARTFLEKIASEHRAVYGVTTGFGTFSNVTIPPEKLKKLQLNLIRSHATGYGEPLAP 220

Query: 313 KSKRKI 330
              R +
Sbjct: 221 NRARML 226



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>PTK2_CANGA (Q6FRE7) Serine/threonine-protein kinase PTK2 (EC 2.7.11.1)|
          Length = 777

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 306 ISKVQKENIYITTSLLLVKARTTIYLRQG 392
           I+K    NI+IT++  LVK  TTIY  +G
Sbjct: 275 IAKQLSNNIHITSTFYLVKVPTTIYTTRG 303



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>Y4WF_RHISN (P55684) Hypothetical 37.7 kDa protein y4wF|
          Length = 342

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
 Frame = +2

Query: 323 GKYIYH----HFSPFSKGSDDHLFKAGLDKTDRQVQLLKLPPL----SPIAQNEFLYSIA 478
           G Y YH    HFSP  +    +LF + + +  RQ++L  L  L     P+   E +  + 
Sbjct: 42  GFYAYHLAEHHFSPHGRSPSPNLFLSSVAQRTRQLRLGPLVMLLSLSHPLRAFEEICMLD 101

Query: 479 NLLSHRENLYLGR 517
           +L   R  L +GR
Sbjct: 102 HLSGGRAELGIGR 114



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>I12R2_HUMAN (Q99665) Interleukin-12 receptor beta-2 chain precursor (IL-12|
           receptor beta-2) (IL-12R-beta2)
          Length = 862

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -1

Query: 380 INGRPSLY*KERSGDIYIFLLDFGYSLTPYPVECDFAVEDCSGDNSTRSCAAP 222
           ++G  +L  +++  DIY   LDFG +LTP   E +F  +  + ++   S + P
Sbjct: 161 LSGPKNLTWQKQCKDIYCDYLDFGINLTPESPESNFTAKVTAVNSLGSSSSLP 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,428,292
Number of Sequences: 219361
Number of extensions: 1721893
Number of successful extensions: 3791
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3791
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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