ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal25m03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.12
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
3gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
4dbj|AK062304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
5gb|AC099614.9| Mus musculus chromosome 15, clone RP23-408O11, co... 44 0.46
6gb|AC141639.3| Mus musculus BAC clone RP23-354J7 from chromosome... 44 0.46
7gb|AC026745.8| Homo sapiens chromosome 5 clone RP11-245L6, compl... 44 0.46
8gb|AC010274.6| Homo sapiens chromosome 5 clone CTC-498K21, compl... 44 0.46
9gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, comp... 42 1.8
10gb|AC146188.3| Pan troglodytes BAC clone RP43-35J3 from 7, compl... 42 1.8
11gb|AC006356.3| Homo sapiens PAC clone RP5-1111L2 from 7, complet... 42 1.8
12gb|AC146210.2| Pan troglodytes BAC clone RP43-25O2 from 7, compl... 42 1.8
13emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chr... 42 1.8
14gb|AC090498.4| Homo sapiens chromosome 7 clone RP11-84E17, compl... 42 1.8
15gb|AC131571.4| Homo sapiens chromosome 11, clone RP11-151O13, co... 42 1.8
16gb|AC108456.7| Homo sapiens chromosome 11, clone CTD-2514C7, com... 42 1.8
17gb|AC093262.2| Homo sapiens chromosome 5 clone RP11-252F20, comp... 42 1.8
18gb|AC025253.20|AC025253 Homo sapiens 12 BAC RP11-499A10 (Roswell... 42 1.8
19gb|AC009179.17|AC009179 Homo sapiens chromosome 7 clone RP11-228... 42 1.8
20gb|AC154869.3| Monodelphis domestica, clone XX-216E9, complete s... 42 1.8
21emb|CR792434.8| Zebrafish DNA sequence from clone CH211-219O9 in... 42 1.8
22emb|AL772346.5| Mouse DNA sequence from clone RP23-413E7 on chro... 42 1.8
23emb|AL390768.1| Human DNA sequence from clone RP1-68P15 on chrom... 42 1.8
24gb|AC156947.7| Mus musculus 10 BAC RP24-374M24 (Roswell Park Can... 40 7.3
25ref|XM_544235.2| PREDICTED: Canis familiaris glutamate decarboxy... 40 7.3
26gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete s... 40 7.3
27emb|AL590546.7| Human DNA sequence from clone RP11-402O5 on chro... 40 7.3
28emb|AL513355.16| Human DNA sequence from clone RP11-248J23 on ch... 40 7.3
29emb|AL162503.12| Human DNA sequence from clone RP11-420F12 on ch... 40 7.3
30gb|AY340073.1| Homo sapiens glutamate decarboxylase 2 (pancreati... 40 7.3
31emb|AL138926.13| Human DNA sequence from clone RP11-173E24 on ch... 40 7.3
32emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BA... 40 7.3
33ref|NM_001005618.1| Gallus gallus procollagen-lysine 1, 2-oxoglu... 40 7.3
34gb|AC091165.15| Homo sapiens chromosome 8, clone RP11-366G13, co... 40 7.3
35gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, com... 40 7.3
36gb|AC131254.5| Homo sapiens chromosome 8, clone RP11-94H18, comp... 40 7.3
37gb|AC015631.10|AC015631 Homo sapiens, clone RP11-45L5, complete ... 40 7.3
38gb|AC011303.9| Homo sapiens BAC clone RP11-342D6 from 2, complet... 40 7.3
39gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19... 40 7.3
40dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.3
41gb|AC102012.7| Mus musculus chromosome 3, clone RP24-542B2, comp... 40 7.3
42gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, comp... 40 7.3
43emb|CR769769.7| Zebrafish DNA sequence from clone CH211-190H11 i... 40 7.3
44gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 se... 40 7.3
45emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1... 40 7.3
46emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1... 40 7.3
47emb|BX001059.6| Zebrafish DNA sequence from clone CH211-14L11, c... 40 7.3
48gb|AC161495.3| Mus musculus chromosome 5, clone RP23-393A24, com... 40 7.3
49gb|M81882.1|HUMGAD65A Human glutamate decarboxylase (GAD65) mRNA... 40 7.3
50gb|M59183.1|CHKLYH Chicken lysyl hydroxylase mRNA, complete cds 40 7.3 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 437     ttatcccccatagctcaaaacgaattt 463
               |||||||||| ||||||||||||||||
Sbjct: 3521744 ttatcccccacagctcaaaacgaattt 3521770
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 437     ttatcccccatagctcaaaacgaattt 463
               |||||||||| ||||||||||||||||
Sbjct: 3521855 ttatcccccacagctcaaaacgaattt 3521881
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>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0026H19, complete sequence
          Length = 150620

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 437   ttatcccccatagctcaaaacgaattt 463
             |||||||||| ||||||||||||||||
Sbjct: 39397 ttatcccccacagctcaaaacgaattt 39423
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>dbj|AK062304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A04, full
            insert sequence
          Length = 2057

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 437  ttatcccccatagctcaaaacgaattt 463
            |||||||||| ||||||||||||||||
Sbjct: 1602 ttatcccccacagctcaaaacgaattt 1576
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>gb|AC099614.9| Mus musculus chromosome 15, clone RP23-408O11, complete sequence
          Length = 201092

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 320    aaaggaaaatatatatatcacc 341
              ||||||||||||||||||||||
Sbjct: 164677 aaaggaaaatatatatatcacc 164698
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>gb|AC141639.3| Mus musculus BAC clone RP23-354J7 from chromosome 18, complete sequence
          Length = 216358

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 338   caccacttctctccttttagta 359
             ||||||||||||||||||||||
Sbjct: 32997 caccacttctctccttttagta 33018
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>gb|AC026745.8| Homo sapiens chromosome 5 clone RP11-245L6, complete sequence
          Length = 128963

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 66   tttgcaacaaaaagaaaaatga 87
            ||||||||||||||||||||||
Sbjct: 8389 tttgcaacaaaaagaaaaatga 8410
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>gb|AC010274.6| Homo sapiens chromosome 5 clone CTC-498K21, complete sequence
          Length = 96138

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 66    tttgcaacaaaaagaaaaatga 87
             ||||||||||||||||||||||
Sbjct: 25473 tttgcaacaaaaagaaaaatga 25452
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>gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, complete sequence
          Length = 221727

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 310    ccaaagtccaaaaggaaaata 330
              |||||||||||||||||||||
Sbjct: 206650 ccaaagtccaaaaggaaaata 206630
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>gb|AC146188.3| Pan troglodytes BAC clone RP43-35J3 from 7, complete sequence
          Length = 161143

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 69    gcaacaaaaagaaaaatgaca 89
             |||||||||||||||||||||
Sbjct: 21930 gcaacaaaaagaaaaatgaca 21910
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>gb|AC006356.3| Homo sapiens PAC clone RP5-1111L2 from 7, complete sequence
          Length = 153206

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 69    gcaacaaaaagaaaaatgaca 89
             |||||||||||||||||||||
Sbjct: 44508 gcaacaaaaagaaaaatgaca 44488
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>gb|AC146210.2| Pan troglodytes BAC clone RP43-25O2 from 7, complete sequence
          Length = 137116

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 310    ccaaagtccaaaaggaaaata 330
              |||||||||||||||||||||
Sbjct: 113928 ccaaagtccaaaaggaaaata 113948
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>emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chromosome 13 Contains a
             peroxisomal biogenesis factor 12 (PEX12) pseudogene,
             complete sequence
          Length = 136943

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 322   aggaaaatatatatatcacca 342
             |||||||||||||||||||||
Sbjct: 21164 aggaaaatatatatatcacca 21144
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>gb|AC090498.4| Homo sapiens chromosome 7 clone RP11-84E17, complete sequence
          Length = 188036

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 310    ccaaagtccaaaaggaaaata 330
              |||||||||||||||||||||
Sbjct: 163964 ccaaagtccaaaaggaaaata 163944
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>gb|AC131571.4| Homo sapiens chromosome 11, clone RP11-151O13, complete sequence
          Length = 179812

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    atttgcaacaaaaagaaaaat 85
             |||||||||||||||||||||
Sbjct: 17761 atttgcaacaaaaagaaaaat 17781
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>gb|AC108456.7| Homo sapiens chromosome 11, clone CTD-2514C7, complete sequence
          Length = 197665

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     atttgcaacaaaaagaaaaat 85
              |||||||||||||||||||||
Sbjct: 181251 atttgcaacaaaaagaaaaat 181271
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>gb|AC093262.2| Homo sapiens chromosome 5 clone RP11-252F20, complete sequence
          Length = 164513

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   atttgcaacaaaaagaaaaat 85
            |||||||||||||||||||||
Sbjct: 2236 atttgcaacaaaaagaaaaat 2216
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>gb|AC025253.20|AC025253 Homo sapiens 12 BAC RP11-499A10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 170691

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 72   acaaaaagaaaaatgacagca 92
            |||||||||||||||||||||
Sbjct: 2076 acaaaaagaaaaatgacagca 2056
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>gb|AC009179.17|AC009179 Homo sapiens chromosome 7 clone RP11-228I4, complete sequence
          Length = 179405

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 310    ccaaagtccaaaaggaaaata 330
              |||||||||||||||||||||
Sbjct: 114132 ccaaagtccaaaaggaaaata 114152
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>gb|AC154869.3| Monodelphis domestica, clone XX-216E9, complete sequence
          Length = 159803

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 311    caaagtccaaaaggaaaatat 331
              |||||||||||||||||||||
Sbjct: 143878 caaagtccaaaaggaaaatat 143858
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>emb|CR792434.8| Zebrafish DNA sequence from clone CH211-219O9 in linkage group 3,
             complete sequence
          Length = 69225

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 373   ccatttatttaaggcagggct 393
             |||||||||||||||||||||
Sbjct: 52641 ccatttatttaaggcagggct 52621
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>emb|AL772346.5| Mouse DNA sequence from clone RP23-413E7 on chromosome 4, complete
             sequence
          Length = 189115

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 417   aactgctgaaattaccaccat 437
             |||||||||||||||||||||
Sbjct: 24918 aactgctgaaattaccaccat 24938
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>emb|AL390768.1| Human DNA sequence from clone RP1-68P15 on chromosome 11p13-14.2
             Contains  ESTs, STSs and GSSs, complete sequence
          Length = 57449

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    atttgcaacaaaaagaaaaat 85
             |||||||||||||||||||||
Sbjct: 15930 atttgcaacaaaaagaaaaat 15910
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>gb|AC156947.7| Mus musculus 10 BAC RP24-374M24 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 177171

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   cagcagcactcatgaataat 216
             ||||||||||||||||||||
Sbjct: 16257 cagcagcactcatgaataat 16238
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>ref|XM_544235.2| PREDICTED: Canis familiaris glutamate decarboxylase 2 (GAD2), mRNA
          Length = 2384

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  caaaaggaaaatatatatat 337
            ||||||||||||||||||||
Sbjct: 2301 caaaaggaaaatatatatat 2320
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>gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete sequence
          Length = 144306

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    tttgcaacaaaaagaaaaat 85
             ||||||||||||||||||||
Sbjct: 41340 tttgcaacaaaaagaaaaat 41359
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>emb|AL590546.7| Human DNA sequence from clone RP11-402O5 on chromosome 6, complete
             sequence
          Length = 72962

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ccaaaaggaaaatatatata 336
             ||||||||||||||||||||
Sbjct: 36549 ccaaaaggaaaatatatata 36530
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>emb|AL513355.16| Human DNA sequence from clone RP11-248J23 on chromosome 10 Contains
            part of two novel genes (FLJ39150), two novel genes and a
            ribosomal protein L21 (RPL21) pseudogene, complete
            sequence
          Length = 113212

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  caaaaggaaaatatatatat 337
            ||||||||||||||||||||
Sbjct: 7110 caaaaggaaaatatatatat 7091
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>emb|AL162503.12| Human DNA sequence from clone RP11-420F12 on chromosome 10 Contains the
              GAD2 gene for glutamate decarboxylase 2 (pancreatic islets
              and brain 65kDa), the 3' end of the MYO3A gene for myosin
              IIIA and two CpG islands, complete sequence
          Length = 175594

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    caaaaggaaaatatatatat 337
              ||||||||||||||||||||
Sbjct: 131424 caaaaggaaaatatatatat 131443
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>gb|AY340073.1| Homo sapiens glutamate decarboxylase 2 (pancreatic islets and brain,
             65kDa) (GAD2) gene, complete cds
          Length = 91871

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   caaaaggaaaatatatatat 337
             ||||||||||||||||||||
Sbjct: 86802 caaaaggaaaatatatatat 86821
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>emb|AL138926.13| Human DNA sequence from clone RP11-173E24 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 169162

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   ttgataagcttctagcaaat 195
             ||||||||||||||||||||
Sbjct: 48392 ttgataagcttctagcaaat 48373
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>emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BAC clone T6I14 (ESSA project)
          Length = 90472

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    aatttgcaacaaaaagaaaaatga 87
             |||| |||||||||||||||||||
Sbjct: 82732 aattagcaacaaaaagaaaaatga 82709
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>ref|NM_001005618.1| Gallus gallus procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1
           (PLOD1), mRNA
          Length = 3887

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 ccttcgtcacacacagtaca 136
           ||||||||||||||||||||
Sbjct: 944 ccttcgtcacacacagtaca 925
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>gb|AC091165.15| Homo sapiens chromosome 8, clone RP11-366G13, complete sequence
          Length = 188456

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    tatattgataagcttctagc 191
              ||||||||||||||||||||
Sbjct: 162831 tatattgataagcttctagc 162812
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>gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, complete sequence
          Length = 209278

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   caaaaggaaaatatatatat 337
             ||||||||||||||||||||
Sbjct: 44488 caaaaggaaaatatatatat 44507
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>gb|AC131254.5| Homo sapiens chromosome 8, clone RP11-94H18, complete sequence
          Length = 153000

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   tatattgataagcttctagc 191
             ||||||||||||||||||||
Sbjct: 45348 tatattgataagcttctagc 45367
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>gb|AC015631.10|AC015631 Homo sapiens, clone RP11-45L5, complete sequence
          Length = 145138

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    caacaaaaagaaaaatgacagcat 93
             |||||||||||||||||| |||||
Sbjct: 51973 caacaaaaagaaaaatgaaagcat 51950
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>gb|AC011303.9| Homo sapiens BAC clone RP11-342D6 from 2, complete sequence
          Length = 188616

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   aaaatatatatatcaccact 344
             ||||||||||||||||||||
Sbjct: 69657 aaaatatatatatcaccact 69638
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>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete
             sequence
          Length = 93485

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ccaaaaggaaaatatatata 336
             ||||||||||||||||||||
Sbjct: 86087 ccaaaaggaaaatatatata 86068
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>dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12
          Length = 79259

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    aatttgcaacaaaaagaaaaatga 87
             |||| |||||||||||||||||||
Sbjct: 43474 aattagcaacaaaaagaaaaatga 43451
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>gb|AC102012.7| Mus musculus chromosome 3, clone RP24-542B2, complete sequence
          Length = 155366

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    caaaaggaaaatatatatat 337
              ||||||||||||||||||||
Sbjct: 126187 caaaaggaaaatatatatat 126206
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>gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, complete sequence
          Length = 236335

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    caaaaggaaaatatatatat 337
              ||||||||||||||||||||
Sbjct: 218152 caaaaggaaaatatatatat 218171
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>emb|CR769769.7| Zebrafish DNA sequence from clone CH211-190H11 in linkage group 11,
              complete sequence
          Length = 160246

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 316    tccaaaaggaaaatatatatatca 339
              ||||||||||||| ||||||||||
Sbjct: 159209 tccaaaaggaaaaaatatatatca 159232
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>gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 sequence, complete sequence
          Length = 114498

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    ccaaaaggaaaatatatata 336
              ||||||||||||||||||||
Sbjct: 107580 ccaaaaggaaaatatatata 107599
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>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208102

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     aaaaagaaaaatgacagcat 93
              ||||||||||||||||||||
Sbjct: 108579 aaaaagaaaaatgacagcat 108598
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>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 242832

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aaaaagaaaaatgacagcat 93
             ||||||||||||||||||||
Sbjct: 11375 aaaaagaaaaatgacagcat 11394
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>emb|BX001059.6| Zebrafish DNA sequence from clone CH211-14L11, complete sequence
          Length = 80440

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 316   tccaaaaggaaaatatatatatca 339
             ||||||||||||| ||||||||||
Sbjct: 43972 tccaaaaggaaaaaatatatatca 43949
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>gb|AC161495.3| Mus musculus chromosome 5, clone RP23-393A24, complete sequence
          Length = 194459

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    caaaaggaaaatatatatat 337
              ||||||||||||||||||||
Sbjct: 173458 caaaaggaaaatatatatat 173439
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>gb|M81882.1|HUMGAD65A Human glutamate decarboxylase (GAD65) mRNA, complete cds
          Length = 2400

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  caaaaggaaaatatatatat 337
            ||||||||||||||||||||
Sbjct: 2307 caaaaggaaaatatatatat 2326
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>gb|M59183.1|CHKLYH Chicken lysyl hydroxylase mRNA, complete cds
          Length = 3892

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 ccttcgtcacacacagtaca 136
           ||||||||||||||||||||
Sbjct: 944 ccttcgtcacacacagtaca 925


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,133,907
Number of Sequences: 3902068
Number of extensions: 7133907
Number of successful extensions: 145733
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145552
Number of HSP's gapped (non-prelim): 181
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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