Clone Information

BLAST Search Result

Clone Name	rbaal25l19
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_468773.1\| Oryza sativa (japonica cultivar-group), mRNA	317	3e-83
2	dbj\|AK069123.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	317	3e-83
3	dbj\|AK060637.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	317	3e-83
4	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	184	2e-43
5	gb\|AC137999.2\| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genom...	184	2e-43
6	gb\|AC133398.4\| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genom...	184	2e-43
7	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	184	2e-43
8	gb\|AY107812.1\| Zea mays PCO119122 mRNA sequence	159	1e-35
9	dbj\|AB219939.1\| Lycopersicon esculentum LeHSP110/ClpB mRNA for h...	64	6e-07
10	ref\|NM_121549.2\| Arabidopsis thaliana ATP binding / ATPase/ nucl...	50	0.009
11	gb\|BT000447.1\| Arabidopsis thaliana HSP100/ClpB, putative (At5g1...	50	0.009
12	emb\|AL391143.1\|ATT20K14 Arabidopsis thaliana DNA chromosome 5, B...	50	0.009
13	gb\|BT002569.1\| Arabidopsis thaliana HSP100/ClpB, putative (At5g1...	50	0.009
14	emb\|CR956619.7\| M.truncatula DNA sequence from clone MTH2-65F22 ...	44	0.57
15	gb\|AC137828.24\| Medicago truncatula clone mth2-6c16, complete se...	44	0.57
16	ref\|NM_128071.2\| Arabidopsis thaliana ATP binding / ATPase/ nucl...	42	2.3
17	gb\|AC152185.1\| Medicago truncatula chromosome 2 BAC clone mth2-9...	42	2.3
18	emb\|BX569689.1\| Synechococcus sp. WH8102 complete genome; segmen...	42	2.3
19	gb\|AY070722.1\| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co...	42	2.3
20	gb\|AE017340.1\| Idiomarina loihiensis L2TR, complete genome	42	2.3
21	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.3
22	dbj\|AP004087.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.3
23	gb\|BT002223.1\| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co...	42	2.3
24	gb\|CP000094.1\| Pseudomonas fluorescens PfO-1, complete genome	40	9.0
25	ref\|XM_747822.1\| Aspergillus fumigatus Af293 C6 transcription fa...	40	9.0
26	gb\|AC122015.3\| Mus musculus BAC clone RP24-358M18 from chromosom...	40	9.0
27	ref\|XM_531833.2\| PREDICTED: Canis familiaris similar to CG9351-P...	40	9.0
28	gb\|BC006215.2\| Homo sapiens KIAA1387 protein, mRNA (cDNA clone M...	40	9.0
29	ref\|NM_020463.1\| Homo sapiens KIAA1387 protein (SMEK2), mRNA	40	9.0
30	emb\|BX294144.1\| Pirellula sp. strain 1 complete genome; segment ...	40	9.0
31	gb\|BC060855.1\| Homo sapiens KIAA1387 protein, mRNA (cDNA clone M...	40	9.0
32	emb\|AL136556.1\|HSM801530 Homo sapiens mRNA; cDNA DKFZp761I0112 (...	40	9.0
33	emb\|AL606482.14\| Mouse DNA sequence from clone RP23-360H16 on ch...	40	9.0
34	dbj\|AK098321.1\| Homo sapiens cDNA FLJ41002 fis, clone UTERU2016979	40	9.0
35	dbj\|AK023148.1\| Homo sapiens cDNA FLJ13086 fis, clone NT2RP3002097	40	9.0
36	gb\|CP000249.1\| Frankia sp. CcI3, complete genome	40	9.0
37	dbj\|AK007690.1\| Mus musculus 10 day old male pancreas cDNA, RIKE...	40	9.0
38	gb\|AC015982.9\| Homo sapiens BAC clone RP11-554J4 from 2, complet...	40	9.0
39	gb\|AC147220.3\| Mus musculus BAC clone RP23-51A20 from chromosome...	40	9.0
40	dbj\|AK026437.1\| Homo sapiens cDNA: FLJ22784 fis, clone KAIA2048	40	9.0
41	emb\|CR759840.6\| Zebrafish DNA sequence from clone DKEY-239O7 in ...	40	9.0
42	gb\|AC127585.3\| Mus musculus BAC clone RP24-141G21 from 15, compl...	40	9.0
43	gb\|AC134598.3\| Mus musculus BAC clone RP23-175C23 from 8, comple...	40	9.0
44	gb\|AC138721.4\| Mus musculus BAC clone RP23-157G22 from 6, comple...	40	9.0
45	gb\|AC140306.3\| Mus musculus BAC clone RP23-386L13 from 8, comple...	40	9.0
46	emb\|AL929309.6\| Zebrafish DNA sequence from clone CH211-51L3 in ...	40	9.0
47	emb\|AL122106.1\|HSM801263 Homo sapiens mRNA; cDNA DKFZp434D1227 (...	40	9.0
48	dbj\|AB037808.1\| Homo sapiens mRNA for KIAA1387 protein, partial cds	40	9.0

>ref|XM_468773.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3546

 Score =  317 bits (160), Expect = 3e-83
 Identities = 363/431 (84%)
 Strand = Plus / Minus

                                                                        
Query: 208  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 267
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3155 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3096

                                                                        
Query: 268  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 327
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3095 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 3036

                                                                        
Query: 328  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 387
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 3035 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 2976

                                                                        
Query: 388  agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 447
            | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 2975 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 2916

                                                                        
Query: 448  tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 507
            |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 2915 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 2856

                                                                        
Query: 508  cttgccaactgtaatttcacaatgctgnttatctgcttcctctcaagaggcttgaagacg 567
            ||||| | ||||||||| ||||||||| | ||||| | ||||||||| ||||||||||| 
Sbjct: 2855 cttgcaagctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagaca 2796

                                                                        
Query: 568  atgtactcgtccacacgattcatgaactcaggacggaaaacagatcttgcagcatccatc 627
            |||||||| || |  |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2795 atgtactcatcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatc 2736

                       
Query: 628  actctcttctt 638
            || ||||||||
Sbjct: 2735 accctcttctt 2725

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>dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007C17, full
            insert sequence
          Length = 3303

 Score =  317 bits (160), Expect = 3e-83
 Identities = 363/431 (84%)
 Strand = Plus / Minus

                                                                        
Query: 208  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 267
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3155 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3096

                                                                        
Query: 268  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 327
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3095 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 3036

                                                                        
Query: 328  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 387
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 3035 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 2976

                                                                        
Query: 388  agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 447
            | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 2975 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 2916

                                                                        
Query: 448  tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 507
            |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 2915 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 2856

                                                                        
Query: 508  cttgccaactgtaatttcacaatgctgnttatctgcttcctctcaagaggcttgaagacg 567
            ||||| | ||||||||| ||||||||| | ||||| | ||||||||| ||||||||||| 
Sbjct: 2855 cttgcaagctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagaca 2796

                                                                        
Query: 568  atgtactcgtccacacgattcatgaactcaggacggaaaacagatcttgcagcatccatc 627
            |||||||| || |  |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2795 atgtactcatcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatc 2736

                       
Query: 628  actctcttctt 638
            || ||||||||
Sbjct: 2735 accctcttctt 2725

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>dbj|AK060637.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D01, full
            insert sequence
          Length = 2290

 Score =  317 bits (160), Expect = 3e-83
 Identities = 363/431 (84%)
 Strand = Plus / Minus

                                                                        
Query: 208  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 267
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 2109 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 2050

                                                                        
Query: 268  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 327
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 2049 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 1990

                                                                        
Query: 328  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 387
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 1989 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 1930

                                                                        
Query: 388  agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 447
            | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 1929 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 1870

                                                                        
Query: 448  tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 507
            |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 1869 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 1810

                                                                        
Query: 508  cttgccaactgtaatttcacaatgctgnttatctgcttcctctcaagaggcttgaagacg 567
            ||||| | ||||||||| ||||||||| | ||||| | ||||||||| ||||||||||| 
Sbjct: 1809 cttgcaagctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagaca 1750

                                                                        
Query: 568  atgtactcgtccacacgattcatgaactcaggacggaaaacagatcttgcagcatccatc 627
            |||||||| || |  |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1749 atgtactcatcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatc 1690

                       
Query: 628  actctcttctt 638
            || ||||||||
Sbjct: 1689 accctcttctt 1679

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  184 bits (93), Expect = 2e-43
 Identities = 252/305 (82%)
 Strand = Plus / Minus

                                                                            
Query: 208      ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 267
                |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 17651152 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 17651093

                                                                            
Query: 268      tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 327
                ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 17651092 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 17651033

                                                                            
Query: 328      tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 387
                ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 17651032 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 17650973

                                                                            
Query: 388      agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 447
                | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 17650972 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 17650913

                                                                            
Query: 448      tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 507
                |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 17650912 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 17650853

                     
Query: 508      cttgc 512
                |||||
Sbjct: 17650852 cttgc 17650848



 Score =  143 bits (72), Expect = 8e-31
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                            
Query: 516      ctgtaatttcacaatgctgnttatctgcttcctctcaagaggcttgaagacgatgtactc 575
                ||||||||| ||||||||| | ||||| | ||||||||| ||||||||||| ||||||||
Sbjct: 17650696 ctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagacaatgtactc 17650637

                                                                            
Query: 576      gtccacacgattcatgaactcaggacggaaaacagatcttgcagcatccatcactctctt 635
                 || |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 17650636 atcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatcaccctctt 17650577

                   
Query: 636      ctt 638
                |||
Sbjct: 17650576 ctt 17650574

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>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence,
            complete sequence
          Length = 97152

 Score =  184 bits (93), Expect = 2e-43
 Identities = 252/305 (82%)
 Strand = Plus / Plus

                                                                        
Query: 208  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 267
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3925 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3984

                                                                        
Query: 268  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 327
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3985 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 4044

                                                                        
Query: 328  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 387
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 4045 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 4104

                                                                        
Query: 388  agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 447
            | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 4105 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 4164

                                                                        
Query: 448  tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 507
            |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 4165 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 4224

                 
Query: 508  cttgc 512
            |||||
Sbjct: 4225 cttgc 4229



 Score =  143 bits (72), Expect = 8e-31
 Identities = 110/123 (89%)
 Strand = Plus / Plus

                                                                        
Query: 516  ctgtaatttcacaatgctgnttatctgcttcctctcaagaggcttgaagacgatgtactc 575
            ||||||||| ||||||||| | ||||| | ||||||||| ||||||||||| ||||||||
Sbjct: 4381 ctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagacaatgtactc 4440

                                                                        
Query: 576  gtccacacgattcatgaactcaggacggaaaacagatcttgcagcatccatcactctctt 635
             || |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 4441 atcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatcaccctctt 4500

               
Query: 636  ctt 638
            |||
Sbjct: 4501 ctt 4503

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>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete
              sequence
          Length = 136916

 Score =  184 bits (93), Expect = 2e-43
 Identities = 252/305 (82%)
 Strand = Plus / Plus

                                                                          
Query: 208    ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 267
              |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 132855 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 132914

                                                                          
Query: 268    tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 327
              ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 132915 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 132974

                                                                          
Query: 328    tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 387
              ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 132975 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 133034

                                                                          
Query: 388    agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 447
              | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 133035 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 133094

                                                                          
Query: 448    tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 507
              |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 133095 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 133154

                   
Query: 508    cttgc 512
              |||||
Sbjct: 133155 cttgc 133159



 Score =  143 bits (72), Expect = 8e-31
 Identities = 110/123 (89%)
 Strand = Plus / Plus

                                                                          
Query: 516    ctgtaatttcacaatgctgnttatctgcttcctctcaagaggcttgaagacgatgtactc 575
              ||||||||| ||||||||| | ||||| | ||||||||| ||||||||||| ||||||||
Sbjct: 133311 ctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagacaatgtactc 133370

                                                                          
Query: 576    gtccacacgattcatgaactcaggacggaaaacagatcttgcagcatccatcactctctt 635
               || |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 133371 atcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatcaccctctt 133430

                 
Query: 636    ctt 638
              |||
Sbjct: 133431 ctt 133433

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  184 bits (93), Expect = 2e-43
 Identities = 252/305 (82%)
 Strand = Plus / Minus

                                                                            
Query: 208      ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 267
                |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 17644693 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 17644634

                                                                            
Query: 268      tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 327
                ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 17644633 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 17644574

                                                                            
Query: 328      tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 387
                ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 17644573 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 17644514

                                                                            
Query: 388      agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 447
                | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 17644513 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 17644454

                                                                            
Query: 448      tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 507
                |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 17644453 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 17644394

                     
Query: 508      cttgc 512
                |||||
Sbjct: 17644393 cttgc 17644389



 Score =  143 bits (72), Expect = 8e-31
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                            
Query: 516      ctgtaatttcacaatgctgnttatctgcttcctctcaagaggcttgaagacgatgtactc 575
                ||||||||| ||||||||| | ||||| | ||||||||| ||||||||||| ||||||||
Sbjct: 17644237 ctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagacaatgtactc 17644178

                                                                            
Query: 576      gtccacacgattcatgaactcaggacggaaaacagatcttgcagcatccatcactctctt 635
                 || |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 17644177 atcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatcaccctctt 17644118

                   
Query: 636      ctt 638
                |||
Sbjct: 17644117 ctt 17644115

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>gb|AY107812.1| Zea mays PCO119122 mRNA sequence
          Length = 696

 Score =  159 bits (80), Expect = 1e-35
 Identities = 262/322 (81%), Gaps = 3/322 (0%)
 Strand = Plus / Plus

                                                                       
Query: 187 catcagactgtcggcaggaacttctcgtcttgagcagcagccggcttggattcctcgttc 246
           |||||||| | ||||| |||||||||| |||   ||||||| ||||| |||| |||   |
Sbjct: 368 catcagacagccggcaagaacttctcgcctt---cagcagcgggcttcgattgctcaccc 424

                                                                       
Query: 247 atcttccggaagacaagcttctgctgggggagctgtccgttcgacggcaccgtcacctga 306
           |  |||||||| || |||||||| || || ||||| ||||| || |||||||| ||||| 
Sbjct: 425 actttccggaaaactagcttctgttgcggaagctggccgttagagggcaccgtgacctgg 484

                                                                       
Query: 307 gtgtcgacggagatgctgtcctcgtccttgaactcgcctctgaggatacccttggccagt 366
           ||||| ||  |||||||||||||||||||||| || ||||||||||| ||||| || |||
Sbjct: 485 gtgtccacaaagatgctgtcctcgtccttgaaatcacctctgaggatgcccttcgcgagt 544

                                                                       
Query: 367 tcgttctccacgtactgctggagcactcgcttcactggcctggcaccgtagttggggtcg 426
           ||||||||||||| ||| || | ||||| |||||| ||||| || || ||||| ||||| 
Sbjct: 545 tcgttctccacgtgctgttgaatcactctcttcaccggcctcgcgccatagttcgggtca 604

                                                                       
Query: 427 tagccaaggcttcccaggaactcgattgctgacggtgagacgtcgagtttgatcttgcgg 486
           || || |||||||||| ||| || || ||    |||||||| || || ||||| ||||||
Sbjct: 605 taccccaggcttcccaagaattcaatagcaccgggtgagacttccagcttgattttgcgg 664

                                 
Query: 487 tcggcgatcctcttctgcactc 508
           || |||||||||||||| ||||
Sbjct: 665 tctgcgatcctcttctgtactc 686

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>dbj|AB219939.1| Lycopersicon esculentum LeHSP110/ClpB mRNA for heat shock protein,
            complete cds
          Length = 3144

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 325  tcctcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgc 384
            ||||| |||||||| || ||||| |  || || ||||||| ||||||||| || | ||||
Sbjct: 2831 tcctcatccttgaattctcctcttaatattcctttggccaattcgttctcaacattctgc 2772

                                                                    
Query: 385  tggagcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcc 440
            |||| ||| |||||||||||||  || || ||||||||||| || ||||| |||||
Sbjct: 2771 tggatcacccgcttcactggccgtgctccatagttggggtcataaccaagacttcc 2716



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 586  ttcatgaactcaggacggaaaacagatcttgcagcatccatcac 629
            |||||||||||||| |||||||| |  | |||||||||||||||
Sbjct: 2570 ttcatgaactcagggcggaaaactgcacgtgcagcatccatcac 2527

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>ref|NM_121549.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding / protein binding AT5G15450 mRNA,
            complete cds
          Length = 2999

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                        
Query: 550  tcaagaggcttgaagacgatgtactcgtccacacgattcatgaactcaggacggaaaaca 609
            |||||||| ||||| || || ||||| || || | ||||||||| |||||||| || |  
Sbjct: 2644 tcaagaggtttgaaaactatatactcatcaaccctattcatgaattcaggacgaaagatt 2585

                                     
Query: 610  gatcttgcagcatccatcactctct 634
            || |||||||||| |||||||||||
Sbjct: 2584 gaccttgcagcattcatcactctct 2560

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>gb|BT000447.1| Arabidopsis thaliana HSP100/ClpB, putative (At5g15450) mRNA,
           complete cds
          Length = 905

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 550 tcaagaggcttgaagacgatgtactcgtccacacgattcatgaactcaggacggaaaaca 609
           |||||||| ||||| || || ||||| || || | ||||||||| |||||||| || |  
Sbjct: 363 tcaagaggtttgaaaactatatactcatcaaccctattcatgaattcaggacgaaagatt 304

                                    
Query: 610 gatcttgcagcatccatcactctct 634
           || |||||||||| |||||||||||
Sbjct: 303 gaccttgcagcattcatcactctct 279

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>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project)
          Length = 90176

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                         
Query: 550   tcaagaggcttgaagacgatgtactcgtccacacgattcatgaactcaggacggaaaaca 609
             |||||||| ||||| || || ||||| || || | ||||||||| |||||||| || |  
Sbjct: 20880 tcaagaggtttgaaaactatatactcatcaaccctattcatgaattcaggacgaaagatt 20939

                                      
Query: 610   gatcttgcagcatccatcactctct 634
             || |||||||||| |||||||||||
Sbjct: 20940 gaccttgcagcattcatcactctct 20964

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>gb|BT002569.1| Arabidopsis thaliana HSP100/ClpB, putative (At5g15450) mRNA,
           complete cds
          Length = 691

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 550 tcaagaggcttgaagacgatgtactcgtccacacgattcatgaactcaggacggaaaaca 609
           |||||||| ||||| || || ||||| || || | ||||||||| |||||||| || |  
Sbjct: 167 tcaagaggtttgaaaactatatactcatcaaccctattcatgaattcaggacgaaagatt 108

                                    
Query: 610 gatcttgcagcatccatcactctct 634
           || |||||||||| |||||||||||
Sbjct: 107 gaccttgcagcattcatcactctct 83

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>emb|CR956619.7| M.truncatula DNA sequence from clone MTH2-65F22 on chromosome 3, complete
              sequence
          Length = 148409

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 620    catccatcactctcttcttcat 641
              ||||||||||||||||||||||
Sbjct: 146231 catccatcactctcttcttcat 146252

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>gb|AC137828.24| Medicago truncatula clone mth2-6c16, complete sequence
          Length = 128575

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 620   catccatcactctcttcttcat 641
             ||||||||||||||||||||||
Sbjct: 21397 catccatcactctcttcttcat 21418

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>ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding / protein binding AT2G25140 mRNA,
            complete cds
          Length = 3223

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 390  cactcgcttcactggcctggcaccgtagttggggtcgtagccaag 434
            |||||||||||| ||||| || |||||||| |||||  |||||||
Sbjct: 2887 cactcgcttcaccggccttgccccgtagttagggtcaaagccaag 2843

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>gb|AC152185.1| Medicago truncatula chromosome 2 BAC clone mth2-97e5, complete sequence
          Length = 132467

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 619   gcatccatcactctcttcttc 639
             |||||||||||||||||||||
Sbjct: 95835 gcatccatcactctcttcttc 95815

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>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 372   ctccacgtactgctggagcac 392
             |||||||||||||||||||||
Sbjct: 23702 ctccacgtactgctggagcac 23722

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>gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 3223

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 390  cactcgcttcactggcctggcaccgtagttggggtcgtagccaag 434
            |||||||||||| ||||| || |||||||| |||||  |||||||
Sbjct: 2887 cactcgcttcaccggccttgccccgtagttagggtcaaagccaag 2843

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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 574     tcgtccacacgattcatgaactcaggacggaaa 606
               ||||||||||| || ||||| ||||||||||||
Sbjct: 1269818 tcgtccacacggttaatgaattcaggacggaaa 1269850

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                            
Query: 381     ctgctggagcactcgcttcactggcctggcaccgtagttggggtc 425
               |||||||| ||| | |||||| ||||| ||||||||||| |||||
Sbjct: 4568010 ctgctggatcaccctcttcacaggcctagcaccgtagttagggtc 4568054

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>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1297_C09
          Length = 163378

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 381    ctgctggagcactcgcttcactggcctggcaccgtagttggggtc 425
              |||||||| ||| | |||||| ||||| ||||||||||| |||||
Sbjct: 103389 ctgctggatcaccctcttcacaggcctagcaccgtagttagggtc 103433

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>gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 2895

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 390  cactcgcttcactggcctggcaccgtagttggggtcgtagccaag 434
            |||||||||||| ||||| || |||||||| |||||  |||||||
Sbjct: 2733 cactcgcttcaccggccttgccccgtagttagggtcaaagccaag 2689

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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 475     ttgatcttgcggtcggcgat 494
               ||||||||||||||||||||
Sbjct: 4213488 ttgatcttgcggtcggcgat 4213507

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>ref|XM_747822.1| Aspergillus fumigatus Af293 C6 transcription factor UaY (Afu1g15470)
            partial mRNA
          Length = 3267

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  gacaagcttctgctggggga 277
            ||||||||||||||||||||
Sbjct: 2437 gacaagcttctgctggggga 2418

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>gb|AC122015.3| Mus musculus BAC clone RP24-358M18 from chromosome 6, complete sequence
          Length = 166966

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 616   gcagcatccatcactctcttcttc 639
             ||||||||||| ||||||||||||
Sbjct: 47740 gcagcatccattactctcttcttc 47717

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>ref|XM_531833.2| PREDICTED: Canis familiaris similar to CG9351-PA, isoform A
            (LOC474603), mRNA
          Length = 3441

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 433  aggcttcccaggaactcgattgct 456
            |||||||||||||||| |||||||
Sbjct: 3379 aggcttcccaggaacttgattgct 3402

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>gb|BC006215.2| Homo sapiens KIAA1387 protein, mRNA (cDNA clone MGC:2579
            IMAGE:3140319), complete cds
          Length = 3282

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 433  aggcttcccaggaactcgattgct 456
            |||||||||||||||| |||||||
Sbjct: 2928 aggcttcccaggaacttgattgct 2951

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>ref|NM_020463.1| Homo sapiens KIAA1387 protein (SMEK2), mRNA
          Length = 4172

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 433  aggcttcccaggaactcgattgct 456
            |||||||||||||||| |||||||
Sbjct: 2787 aggcttcccaggaacttgattgct 2810

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>emb|BX294144.1| Pirellula sp. strain 1 complete genome; segment 12/24
          Length = 304850

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 574    tcgtccacacgattcatgaactcaggacggaa 605
              ||||||| ||| |||| |||||||||||||||
Sbjct: 256787 tcgtccaaacggttcaagaactcaggacggaa 256756

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>gb|BC060855.1| Homo sapiens KIAA1387 protein, mRNA (cDNA clone MGC:71778
            IMAGE:5259789), complete cds
          Length = 4172

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 433  aggcttcccaggaactcgattgct 456
            |||||||||||||||| |||||||
Sbjct: 2787 aggcttcccaggaacttgattgct 2810

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>emb|AL136556.1|HSM801530 Homo sapiens mRNA; cDNA DKFZp761I0112 (from clone DKFZp761I0112)
          Length = 2528

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 433  aggcttcccaggaactcgattgct 456
            |||||||||||||||| |||||||
Sbjct: 1146 aggcttcccaggaacttgattgct 1169

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>emb|AL606482.14| Mouse DNA sequence from clone RP23-360H16 on chromosome 11 Contains the
             genes for olfactory receptors MOR135-7, -8, -10 and -28,
             three olfactory receptor MOR135 pseudogenes, and the gene
             for olfactory receptor MOR157-1, complete sequence
          Length = 199115

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   tatctgcttcctctcaagag 556
             ||||||||||||||||||||
Sbjct: 32301 tatctgcttcctctcaagag 32320

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>dbj|AK098321.1| Homo sapiens cDNA FLJ41002 fis, clone UTERU2016979
          Length = 2341

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 433 aggcttcccaggaactcgattgct 456
           |||||||||||||||| |||||||
Sbjct: 972 aggcttcccaggaacttgattgct 995

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>dbj|AK023148.1| Homo sapiens cDNA FLJ13086 fis, clone NT2RP3002097
          Length = 2415

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 433  aggcttcccaggaactcgattgct 456
            |||||||||||||||| |||||||
Sbjct: 1046 aggcttcccaggaacttgattgct 1069

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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 293     gcaccgtcacctgagtgtcg 312
               ||||||||||||||||||||
Sbjct: 5414972 gcaccgtcacctgagtgtcg 5414953

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>dbj|AK007690.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810034E14
           product:unclassifiable, full insert sequence
          Length = 1420

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 543 cttcctctcaagaggcttga 562
           ||||||||||||||||||||
Sbjct: 560 cttcctctcaagaggcttga 579

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>gb|AC015982.9| Homo sapiens BAC clone RP11-554J4 from 2, complete sequence
          Length = 191546

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 433   aggcttcccaggaactcgattgct 456
             |||||||||||||||| |||||||
Sbjct: 29646 aggcttcccaggaacttgattgct 29623

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>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence
          Length = 208705

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 426    gtagccaaggcttcccaggaactc 449
              |||||||||||||||| |||||||
Sbjct: 104257 gtagccaaggcttccctggaactc 104234

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>dbj|AK026437.1| Homo sapiens cDNA: FLJ22784 fis, clone KAIA2048
          Length = 3543

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 433  aggcttcccaggaactcgattgct 456
            |||||||||||||||| |||||||
Sbjct: 2155 aggcttcccaggaacttgattgct 2178

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>emb|CR759840.6| Zebrafish DNA sequence from clone DKEY-239O7 in linkage group 25,
             complete sequence
          Length = 110071

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    gggttgtcctgctgctaataatgt 56
             ||||||| ||||||||||||||||
Sbjct: 56225 gggttgttctgctgctaataatgt 56248

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>gb|AC127585.3| Mus musculus BAC clone RP24-141G21 from 15, complete sequence
          Length = 145858

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 617    cagcatccatcactctcttcttca 640
              |||||||| |||||||||||||||
Sbjct: 104382 cagcatccttcactctcttcttca 104405

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>gb|AC134598.3| Mus musculus BAC clone RP23-175C23 from 8, complete sequence
          Length = 205622

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 616   gcagcatccatcactctcttcttc 639
             ||||||||||||||| ||||||||
Sbjct: 43867 gcagcatccatcactgtcttcttc 43844

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>gb|AC138721.4| Mus musculus BAC clone RP23-157G22 from 6, complete sequence
          Length = 187385

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 616 gcagcatccatcactctcttcttc 639
           ||||||||||| ||||||||||||
Sbjct: 294 gcagcatccattactctcttcttc 271

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>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence
          Length = 220059

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 614    ttgcagcatccatcactctc 633
              ||||||||||||||||||||
Sbjct: 165363 ttgcagcatccatcactctc 165382

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>emb|AL929309.6| Zebrafish DNA sequence from clone CH211-51L3 in linkage group 25,
             complete sequence
          Length = 191745

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    gggttgtcctgctgctaataatgt 56
             ||||||| ||||||||||||||||
Sbjct: 80560 gggttgttctgctgctaataatgt 80583

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>emb|AL122106.1|HSM801263 Homo sapiens mRNA; cDNA DKFZp434D1227 (from clone DKFZp434D1227)
          Length = 1788

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 433 aggcttcccaggaactcgattgct 456
           |||||||||||||||| |||||||
Sbjct: 351 aggcttcccaggaacttgattgct 374

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>dbj|AB037808.1| Homo sapiens mRNA for KIAA1387 protein, partial cds
          Length = 4385

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 433  aggcttcccaggaactcgattgct 456
            |||||||||||||||| |||||||
Sbjct: 3016 aggcttcccaggaacttgattgct 3039


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,703,745
Number of Sequences: 3902068
Number of extensions: 4703745
Number of successful extensions: 87321
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87094
Number of HSP's gapped (non-prelim): 219
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result