| Clone Name | rbaal25j09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | HA22I_ARATH (Q8LE10) HVA22-like protein i (AtHVA22i) | 62 | 1e-09 | 2 | HA22J_ARATH (Q8GXE9) HVA22-like protein j (AtHVA22j) | 59 | 7e-09 | 3 | HA22H_ARATH (Q8LEM6) HVA22-like protein h (AtHVA22h) | 56 | 6e-08 | 4 | HA22G_ARATH (Q9LR09) Putative HVA22-like protein g (AtHVA22g) | 54 | 4e-07 | 5 | ESR2_ANGJA (O13012) Estrogen receptor beta (ER-beta) | 36 | 0.081 | 6 | REEP3_MOUSE (Q99KK1) Receptor expression-enhancing protein 3 | 30 | 5.8 | 7 | VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous... | 29 | 9.9 | 8 | YOP1_EMENI (Q5BB01) Protein yop1 | 29 | 9.9 |
|---|
>HA22I_ARATH (Q8LE10) HVA22-like protein i (AtHVA22i)| Length = 296 Score = 62.0 bits (149), Expect = 1e-09 Identities = 28/69 (40%), Positives = 41/69 (59%) Frame = -1 Query: 545 LWYPQTRGSDIVYENFVRPLVMQYEPNIEERLRYLRANAGDLIVFYLKNFTDRGYELFLR 366 LWYP+TRG+ VYE+F RP + Q+E +I+ L LR AGD+ V Y + G L Sbjct: 78 LWYPKTRGTTYVYESFFRPYLSQHENDIDHSLLELRTRAGDMAVIYWQRVASYGQTRILE 137 Query: 365 VLDFAQSQA 339 +L + +Q+ Sbjct: 138 ILQYVAAQS 146
>HA22J_ARATH (Q8GXE9) HVA22-like protein j (AtHVA22j)| Length = 258 Score = 59.3 bits (142), Expect = 7e-09 Identities = 24/69 (34%), Positives = 40/69 (57%) Frame = -1 Query: 545 LWYPQTRGSDIVYENFVRPLVMQYEPNIEERLRYLRANAGDLIVFYLKNFTDRGYELFLR 366 LWYP+T+G+ VYE ++P + Q+E I+ ++ LRA A D +FY NF G ++ Sbjct: 78 LWYPKTKGTRHVYETLLKPYMAQHETEIDRKIMELRARAWDFFIFYFNNFAQAGQSTLIQ 137 Query: 365 VLDFAQSQA 339 + +Q+ Sbjct: 138 GFQYVLAQS 146
>HA22H_ARATH (Q8LEM6) HVA22-like protein h (AtHVA22h)| Length = 315 Score = 56.2 bits (134), Expect = 6e-08 Identities = 26/69 (37%), Positives = 39/69 (56%) Frame = -1 Query: 545 LWYPQTRGSDIVYENFVRPLVMQYEPNIEERLRYLRANAGDLIVFYLKNFTDRGYELFLR 366 LW+P+TRG+ VY++F +P V ++E I+ L LR AGDL V Y + G + Sbjct: 78 LWFPKTRGTTYVYDSFFQPYVAKHENEIDRSLIELRTKAGDLAVIYCRKAVSYGQTRIVE 137 Query: 365 VLDFAQSQA 339 +L F Q+ Sbjct: 138 ILHFVALQS 146
>HA22G_ARATH (Q9LR09) Putative HVA22-like protein g (AtHVA22g)| Length = 166 Score = 53.5 bits (127), Expect = 4e-07 Identities = 21/69 (30%), Positives = 41/69 (59%) Frame = -1 Query: 545 LWYPQTRGSDIVYENFVRPLVMQYEPNIEERLRYLRANAGDLIVFYLKNFTDRGYELFLR 366 LW+P+T+G+ VY++F RP + ++E I+ L ++ A D+ + YL+ ++G F Sbjct: 67 LWFPKTKGTTYVYDSFFRPYIAKHENEIDRNLVKVKTRAKDMAMIYLQKAINQGQTKFFE 126 Query: 365 VLDFAQSQA 339 +L + Q+ Sbjct: 127 ILQYITEQS 135
>ESR2_ANGJA (O13012) Estrogen receptor beta (ER-beta)| Length = 573 Score = 35.8 bits (81), Expect = 0.081 Identities = 20/48 (41%), Positives = 25/48 (52%) Frame = -3 Query: 510 VRELRAAAGDAVRAQHRGEAAVPAGQRRRPHRLLPQELHRQGIRALPP 367 +REL A G R Q RGE VP Q + L P++L + I A PP Sbjct: 259 IREL-AGTGGGARTQRRGEGVVPQTQEAQSSALTPEQLINRIIEAEPP 305
>REEP3_MOUSE (Q99KK1) Receptor expression-enhancing protein 3| Length = 254 Score = 29.6 bits (65), Expect = 5.8 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = -1 Query: 536 PQTRGSDIVYENFVRPLVMQYEPNIEERLRYLRANAGDLIVFYLKNFTDRGYE 378 P TRG+ ++Y F+ PL+ E I++ Y+ +RGYE Sbjct: 79 PYTRGASLIYRKFLHPLLSSKEREIDD---------------YIVQAKERGYE 116
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 28.9 bits (63), Expect = 9.9 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 435 QRRRPHRLLPQELHRQGIRALP 370 Q PH LLPQ+ H+Q + LP Sbjct: 303 QHHHPHLLLPQQHHQQAVAPLP 324
>YOP1_EMENI (Q5BB01) Protein yop1| Length = 169 Score = 28.9 bits (63), Expect = 9.9 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 2/26 (7%) Frame = -1 Query: 545 LWY--PQTRGSDIVYENFVRPLVMQY 474 LW PQT G+ IV+++ V+PLV +Y Sbjct: 123 LWLALPQTNGAQIVFKSLVQPLVGRY 148 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,539,938 Number of Sequences: 219361 Number of extensions: 1243883 Number of successful extensions: 3215 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3215 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)