>ref|XM_472420.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 561

 Score =  210 bits (106), Expect = 4e-51
 Identities = 160/178 (89%)
 Strand = Plus / Minus

                                                                       
Query: 365 cccggaggaagagctcgtatcccctgtcggtgaagttcttgaggtagaagacgatgaggt 424
           ||||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||  | ||
Sbjct: 394 cccggaggaagagatcgtagcccctatcggtgaagttcttgaggtagaagatgagaatgt 335

                                                                       
Query: 425 cgccggcgttggcccgcaggtaccgcagcctctcctcgatgttgggctcgtactgcatca 484
           ||||||| ||||| |||||||| ||||||| ||||||||||||||||| |||||||||||
Sbjct: 334 cgccggcattggcacgcaggtagcgcagccgctcctcgatgttgggctggtactgcatca 275

                                                                     
Query: 485 ccagcggccgcacgaagttctcgtacacgatgtcagaacccctcgtctgggggtacca 542
           |||||||||||| |||| | ||||||||||||||||  ||||| ||||||||||||||
Sbjct: 274 ccagcggccgcaggaaggtgtcgtacacgatgtcagttccccttgtctgggggtacca 217



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 209 cgcggggtcgccgctgcctggccgcgctcctccggtcgc 247
           ||||||||||||| ||||| |||| ||||||||| ||||
Sbjct: 550 cgcggggtcgccggtgcctcgccgtgctcctccgatcgc 512

>dbj|AK108378.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-E03, full
           insert sequence
          Length = 904

 Score =  210 bits (106), Expect = 4e-51
 Identities = 160/178 (89%)
 Strand = Plus / Minus

                                                                       
Query: 365 cccggaggaagagctcgtatcccctgtcggtgaagttcttgaggtagaagacgatgaggt 424
           ||||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||  | ||
Sbjct: 547 cccggaggaagagatcgtagcccctatcggtgaagttcttgaggtagaagatgagaatgt 488

                                                                       
Query: 425 cgccggcgttggcccgcaggtaccgcagcctctcctcgatgttgggctcgtactgcatca 484
           ||||||| ||||| |||||||| ||||||| ||||||||||||||||| |||||||||||
Sbjct: 487 cgccggcattggcacgcaggtagcgcagccgctcctcgatgttgggctggtactgcatca 428

                                                                     
Query: 485 ccagcggccgcacgaagttctcgtacacgatgtcagaacccctcgtctgggggtacca 542
           |||||||||||| |||| | ||||||||||||||||  ||||| ||||||||||||||
Sbjct: 427 ccagcggccgcaggaaggtgtcgtacacgatgtcagttccccttgtctgggggtacca 370



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 209 cgcggggtcgccgctgcctggccgcgctcctccggtcgc 247
           ||||||||||||| ||||| |||| ||||||||| ||||
Sbjct: 703 cgcggggtcgccggtgcctcgccgtgctcctccgatcgc 665

>gb|AY111187.1| Zea mays CL7288_1 mRNA sequence
          Length = 1098

 Score =  210 bits (106), Expect = 4e-51
 Identities = 211/246 (85%)
 Strand = Plus / Minus

                                                                       
Query: 273 gaagctcggtctctccgtccggtcccctcggaacgagaagaacctccttgtccttgagcc 332
           |||||| || |||||||  || || ||||||||||||||||| |||| ||| ||||| ||
Sbjct: 633 gaagcttggcctctccgaacgttcacctcggaacgagaagaaactccgtgttcttgaccc 574

                                                                       
Query: 333 agtggacgcctgcgactgagcgaagtcaaggacccggaggaagagctcgtatcccctgtc 392
             |||||||||||||| |  || ||||||| || ||||||||||||||||| || || ||
Sbjct: 573 tctggacgcctgcgaccggacgtagtcaagcactcggaggaagagctcgtagcctctctc 514

                                                                       
Query: 393 ggtgaagttcttgaggtagaagacgatgaggtcgccggcgttggcccgcaggtaccgcag 452
           |||||||||||||||||||||||||| || ||| ||||| ||||| ||||||||| | ||
Sbjct: 513 ggtgaagttcttgaggtagaagacgaggatgtcaccggcattggcgcgcaggtactggag 454

                                                                       
Query: 453 cctctcctcgatgttgggctcgtactgcatcaccagcggccgcacgaagttctcgtacac 512
           |||  ||||||||||||||| ||||||||||||||||||| | | |||| ||||||||||
Sbjct: 453 cctggcctcgatgttgggctggtactgcatcaccagcggctggaggaaggtctcgtacac 394

                 
Query: 513 gatgtc 518
           ||||||
Sbjct: 393 gatgtc 388

>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12,
             complete sequence
          Length = 116952

 Score =  190 bits (96), Expect = 3e-45
 Identities = 141/156 (90%)
 Strand = Plus / Minus

                                                                         
Query: 365   cccggaggaagagctcgtatcccctgtcggtgaagttcttgaggtagaagacgatgaggt 424
             ||||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||  | ||
Sbjct: 47113 cccggaggaagagatcgtagcccctatcggtgaagttcttgaggtagaagatgagaatgt 47054

                                                                         
Query: 425   cgccggcgttggcccgcaggtaccgcagcctctcctcgatgttgggctcgtactgcatca 484
             ||||||| ||||| |||||||| ||||||| ||||||||||||||||| |||||||||||
Sbjct: 47053 cgccggcattggcacgcaggtagcgcagccgctcctcgatgttgggctggtactgcatca 46994

                                                 
Query: 485   ccagcggccgcacgaagttctcgtacacgatgtcag 520
             |||||||||||| |||| | ||||||||||||||||
Sbjct: 46993 ccagcggccgcaggaaggtgtcgtacacgatgtcag 46958



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 209   cgcggggtcgccgctgcctggccgcgctcctccggtcgc 247
             ||||||||||||| ||||| |||| ||||||||| ||||
Sbjct: 47669 cgcggggtcgccggtgcctcgccgtgctcctccgatcgc 47631

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  190 bits (96), Expect = 3e-45
 Identities = 141/156 (90%)
 Strand = Plus / Minus

                                                                            
Query: 365      cccggaggaagagctcgtatcccctgtcggtgaagttcttgaggtagaagacgatgaggt 424
                ||||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||  | ||
Sbjct: 20536485 cccggaggaagagatcgtagcccctatcggtgaagttcttgaggtagaagatgagaatgt 20536426

                                                                            
Query: 425      cgccggcgttggcccgcaggtaccgcagcctctcctcgatgttgggctcgtactgcatca 484
                ||||||| ||||| |||||||| ||||||| ||||||||||||||||| |||||||||||
Sbjct: 20536425 cgccggcattggcacgcaggtagcgcagccgctcctcgatgttgggctggtactgcatca 20536366

                                                    
Query: 485      ccagcggccgcacgaagttctcgtacacgatgtcag 520
                |||||||||||| |||| | ||||||||||||||||
Sbjct: 20536365 ccagcggccgcaggaaggtgtcgtacacgatgtcag 20536330



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 209      cgcggggtcgccgctgcctggccgcgctcctccggtcgc 247
                ||||||||||||| ||||| |||| ||||||||| ||||
Sbjct: 20537041 cgcggggtcgccggtgcctcgccgtgctcctccgatcgc 20537003

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 423     gtcgccggcgttggcccgcagg 444
               ||||||||||||||||||||||
Sbjct: 2998141 gtcgccggcgttggcccgcagg 2998162

>ref|XM_870976.1| PREDICTED: Bos taurus similar to PTPRF interacting protein alpha 1
            isoform a (LOC618645), partial mRNA
          Length = 1105

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 448  cgcagcctctcctcgatgttg 468
            |||||||||||||||||||||
Sbjct: 1047 cgcagcctctcctcgatgttg 1027

>gb|AF384858.2|AF384858 Aedes aegypti glutathione S-transferase (GST-2) mRNA, complete cds
          Length = 1022

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 254 ggacgtagtcgtcgtcgacga 274
           |||||||||||||||||||||
Sbjct: 327 ggacgtagtcgtcgtcgacga 307

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 420     gaggtcgccggcgttggcccgcagg 444
               ||||||| |||||||||||||||||
Sbjct: 4889616 gaggtcggcggcgttggcccgcagg 4889640

>gb|AY552334.1| Rhizobium etli nucelotidyl transferase, AddB (addB), AddA (addA),
            TrxA (trxA), FolC (folC), AccD (accD), TrpA (trpA), and
            TrpB (trpB) genes, complete cds
          Length = 12400

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 229  gccgcgctcctccggtcgctgccg 252
            |||||||||||||||||| |||||
Sbjct: 2418 gccgcgctcctccggtcggtgccg 2395

>ref|NM_192094.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 250 ccgtggacgtagtcgtcgtcgacg 273
           |||||||||| |||||||||||||
Sbjct: 776 ccgtggacgtcgtcgtcgtcgacg 753

>gb|BT018118.1| Zea mays clone EL01N0554A09.c mRNA sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 aggtaccgcagcctctcctc 461
           ||||||||||||||||||||
Sbjct: 234 aggtaccgcagcctctcctc 215

>emb|AL358116.7| Human DNA sequence from clone RP11-108H13 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 85821

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 58    ctaaatatccacaatcaaatacta 81
             ||||||||||||||||| ||||||
Sbjct: 25739 ctaaatatccacaatcagatacta 25716

>emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chromosome 13 Contains the 3'
              end of a novel gene, a guanidinoacetate N-methyltransferase
              (GAMT) pseudogene and a CpG island, complete sequence
          Length = 164345

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     tcaaatactatctctgttcatgtc 95
              ||||||||| ||||||||||||||
Sbjct: 156963 tcaaatactctctctgttcatgtc 156940

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   gccgcgctcctccggtcgctgccg 252
             |||||||||||||||||| |||||
Sbjct: 27446 gccgcgctcctccggtcggtgccg 27469

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 250      ccgtggacgtagtcgtcgtcgacg 273
                |||||||||| |||||||||||||
Sbjct: 28301807 ccgtggacgtcgtcgtcgtcgacg 28301784

>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence
          Length = 190274

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 217    cgccgctgcctggccgcgctcctc 240
              ||||||| ||||||||||||||||
Sbjct: 142901 cgccgcttcctggccgcgctcctc 142878

>gb|AC137579.3| Homo sapiens chromosome 8, clone RP11-346L1, complete sequence
          Length = 176794

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 217    cgccgctgcctggccgcgctcctc 240
              ||||||| ||||||||||||||||
Sbjct: 167440 cgccgcttcctggccgcgctcctc 167463

>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0478H03
          Length = 167560

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 250    ccgtggacgtagtcgtcgtcgacg 273
              |||||||||| |||||||||||||
Sbjct: 136314 ccgtggacgtcgtcgtcgtcgacg 136291

>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0519D04
          Length = 193068

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 250   ccgtggacgtagtcgtcgtcgacg 273
             |||||||||| |||||||||||||
Sbjct: 16907 ccgtggacgtcgtcgtcgtcgacg 16884

>dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C10, full
           insert sequence
          Length = 1849

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 250 ccgtggacgtagtcgtcgtcgacg 273
           |||||||||| |||||||||||||
Sbjct: 898 ccgtggacgtcgtcgtcgtcgacg 875

>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S
             ribosomal protein S8 (Z214A02.25), and putative casein
             kinase I (Z214A02.27) genes, complete cds
          Length = 158797

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   cattcaggtttctttgagtctttg 153
             |||| |||||||||||||||||||
Sbjct: 85900 cattaaggtttctttgagtctttg 85923

>dbj|AP006291.2| Homo sapiens genomic DNA, chromosome 8 clone:RP11-346L1, complete
             sequence
          Length = 104996

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 217   cgccgctgcctggccgcgctcctc 240
             ||||||| ||||||||||||||||
Sbjct: 95642 cgccgcttcctggccgcgctcctc 95665

>dbj|AP000066.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 2/19
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 217   cgccgctgcctggccgcgctcctc 240
             ||||||| ||||||||||||||||
Sbjct: 46264 cgccgcttcctggccgcgctcctc 46241


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,155,222
Number of Sequences: 3902068
Number of extensions: 3155222
Number of successful extensions: 68094
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67821
Number of HSP's gapped (non-prelim): 273
length of query: 545
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 522
effective length of database: 17,143,297,704
effective search space: 8948801401488
effective search space used: 8948801401488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)