>CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F) (Mitosin)|
            (AH antigen)
          Length = 3210

 Score = 37.4 bits (85), Expect = 0.026
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
 Frame = -2

Query: 458  LGLMALMTAQLDSLD-------REIQSHVSRCADDARXXXXXXXXXEHHMSTAEKEAEEV 300
            L  M+  T  LD L        +E++SH S C    +            + T   +  E+
Sbjct: 2063 LDTMSKKTTALDQLSEKMKEKTQELESHQSECLHCIQVAEAEVKEKTELLQTLSSDVSEL 2122

Query: 299  LKNSEEDLQATLRETDKETQACAR---ELLQLMEGITKFKELVVQTSDEMNKDLYE 141
            LK+ +  LQ  L+  +K++QA +    EL   +  + K KEL+V+ S+ +   L E
Sbjct: 2123 LKD-KTHLQEKLQSLEKDSQALSLTKCELENQIAQLNKEKELLVKESESLQARLSE 2177

>VATE_METKA (Q8TWL9) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase|
           subunit E)
          Length = 200

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = -2

Query: 332 MSTAEKEAEEVLKNSEEDLQATLRETDKETQACARELLQ--LMEGITKFKELVVQTSDEM 159
           +  AEKEAEE+L+ ++ D +    + ++E +   RE+L     E  T+ +  + Q   E+
Sbjct: 11  LEDAEKEAEEILEEAKRDAERIREKAEREAEEVRREILDRARREAETRRRREIAQAKLEI 70

Query: 158 NKDLYECAED 129
            ++     E+
Sbjct: 71  RQERLRVKEE 80

>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 32.7 bits (73), Expect = 0.63
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -1

Query: 315  GSRGGFEELRRGSPGHAEGDRQRNPGVREGAAPAHGGHHE 196
            G RGG  E  RG  G  E  R   PG   GA P H   H+
Sbjct: 1035 GPRGGLGEPGRGHVGRGEEGRGVGPGGLAGAGPVHAVAHQ 1074

>MYSN_DROME (Q99323) Myosin heavy chain, non-muscle (Zipper protein) (Myosin II)|
            (Non-muscle MHC)
          Length = 2057

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 25/77 (32%), Positives = 44/77 (57%)
 Frame = -2

Query: 323  AEKEAEEVLKNSEEDLQATLRETDKETQACARELLQLMEGITKFKELVVQTSDEMNKDLY 144
            A ++AEE  K ++E+LQA  +E D + +A   E+LQL E +   +    + + E  +D  
Sbjct: 1741 ALRDAEEA-KAAKEELQALSKEADGKVKALEAEVLQLTEDLASSER--ARRAAETERD-- 1795

Query: 143  ECAEDMAASWS*GWLHV 93
            E AE++A + + G L +
Sbjct: 1796 ELAEEIANNANKGSLMI 1812

>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)|
          Length = 262

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = -1

Query: 309 RGGFEELRRGSPGHAEGDRQRNPGVREGAAPA----HGGHHEVQGV 184
           +G  E+L+   PGH + + +   G+   AAPA    HGGHH+   V
Sbjct: 110 KGLKEKLQGKLPGHKDTEGEHVTGLPAPAAPASVQTHGGHHDTDVV 155

>CJ035_MOUSE (Q9D882) Protein C10orf35 homolog|
          Length = 120

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 339 TSHEHR*EGSRGGFEELRRGSPGHAEGDRQRNPGVREGAA 220
           T+ +HR   S+ GF     G+P    G RQ+  G R GAA
Sbjct: 20  TTTQHRSSSSQQGFFNRGHGAPPGGPGPRQQQAGARLGAA 59

>VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
          Length = 110

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 22/61 (36%), Positives = 33/61 (54%)
 Frame = -2

Query: 323 AEKEAEEVLKNSEEDLQATLRETDKETQACARELLQLMEGITKFKELVVQTSDEMNKDLY 144
           AEKE  E    +E+D Q  L ET  ++ A  + L Q  E  TK ++L  + S  ++KD+ 
Sbjct: 42  AEKEIAEYKAQTEQDFQRKLEETSGDSGANVKRLEQ--ETDTKIEQLKNEAS-RISKDVV 98

Query: 143 E 141
           E
Sbjct: 99  E 99

>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2505

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 19/76 (25%)
 Frame = -1

Query: 333  HEHR*EGSRGGFEELRRGSPGH-AEGDRQRN-----PGV-------------REGAAPAH 211
            H HR    +GG  E R GSP   A+G+ +R+     PG              REG+ PA 
Sbjct: 933  HVHR----QGGSRESRSGSPRTGADGEHRRHRAHRRPGEEGPEDKAERRARHREGSRPAR 988

Query: 210  GGHHEVQGVSGANE*R 163
            GG  E +G  G    R
Sbjct: 989  GGEGEGEGPDGGERRR 1004

>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1935

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -2

Query: 320  EKEAEEVLKNSEEDLQATLRETDKETQACARELLQLMEGITKFKELVVQTSDE 162
            E E  E LK   +DL+ TL + +KE  A   ++  L E +    E++V+ + E
Sbjct: 944  EDECSE-LKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIVKLTKE 995

>KIF4A_HUMAN (O95239) Chromosome-associated kinesin KIF4A (Chromokinesin)|
          Length = 1232

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 18/82 (21%), Positives = 38/82 (46%)
 Frame = -2

Query: 419  LDREIQSHVSRCADDARXXXXXXXXXEHHMSTAEKEAEEVLKNSEEDLQATLRETDKETQ 240
            ++ E+Q+ + R     +               AEK+ EE +   E+ L +TL+  D+E +
Sbjct: 912  IETELQAELVRMEQQHQEKVLYLLSQLQQSQMAEKQLEESVSEKEQQLLSTLKCQDEELE 971

Query: 239  ACARELLQLMEGITKFKELVVQ 174
               RE+ +  + + +  E++ Q
Sbjct: 972  K-MREVCEQNQQLLRENEIIKQ 992

>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = -1

Query: 348  EKGTSHEHR*EGSRGGFEELRR-GSPGHAEGDRQRNPGVREGAAPAHGGHHEVQGVSGAN 172
            + GT+ E   +G+ G   +  R GSPG  +GDR  N       AP H G     G SG N
Sbjct: 1002 QPGTAGEPGRDGNPGSDGQPGRDGSPG-GKGDRGENGSPGAPGAPGHPGPPGPVGPSGKN 1060

Query: 171  E*RDE*RP 148
              R E  P
Sbjct: 1061 GDRGETGP 1068

>PCNT_MOUSE (P48725) Pericentrin|
          Length = 1920

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
 Frame = -2

Query: 323 AEKEAEEVLKNSEEDLQATLRETDKETQA----CARELLQLMEGITKFKELVVQTSDEMN 156
           A+ EAE  LKN E   QA +++  ++ Q+      ++L Q      K KEL ++T     
Sbjct: 270 AKHEAEVSLKNLEAQHQAAIKKLQEDLQSEHCQYLQDLEQKFREKEKAKELELETLQASY 329

Query: 155 KDL-YECAEDMAASWS 111
           +DL  +  E++   WS
Sbjct: 330 EDLKAQSQEEIRLLWS 345

>GBP2_RAT (Q63663) Interferon-induced guanylate-binding protein 2|
           (GTP-binding protein 2) (Guanine nucleotide-binding
           protein 2) (p67)
          Length = 589

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = -2

Query: 314 EAEEVLKN---SEEDLQATLRETDKETQACARELLQLMEGITKFKELVVQTSDEMNKDLY 144
           EAE VLK    S+ED+  TL +TD+     A+E+        + + +  +T++  N++L 
Sbjct: 454 EAEAVLKKYFESKEDIVETLLKTDQSLTEAAKEI--------EVERIKAETAEAANRELA 505

Query: 143 ECAE 132
           E  E
Sbjct: 506 EKQE 509

>VOME_MOUSE (Q80XI7) Vomeromodulin precursor|
          Length = 591

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 18/67 (26%), Positives = 34/67 (50%)
 Frame = -2

Query: 389 RCADDARXXXXXXXXXEHHMSTAEKEAEEVLKNSEEDLQATLRETDKETQACARELLQLM 210
           +CA  AR         ++ MST   + E+++K  E +L+  L +     +  + +LL L+
Sbjct: 72  KCAPAARYFLSSDKLHDYLMSTLPPQIEDMVKCDEVNLEGMLADVLNTVE--SSDLLSLL 129

Query: 209 EGITKFK 189
           +GI+  K
Sbjct: 130 DGISLLK 136

>SYA_FUSNN (Q8RFJ8) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 867

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 22/80 (27%)
 Frame = -2

Query: 320 EKEAEEVLKNSEEDLQA--------------TLRETDKETQACAREL--------LQLME 207
           EKE  ++LKN E+ L+A              TL++T+KE +   ++L        +  ME
Sbjct: 699 EKEEADILKNIEQKLKATNSNLVEKVEKNLETLKDTEKELEILKQKLALFETKAAISGME 758

Query: 206 GITKFKELVVQTSDEMNKDL 147
            I   K L+    D+  +DL
Sbjct: 759 EIGGVKVLIAAFKDKSTEDL 778

>MYSP_MYTGA (O96064) Paramyosin|
          Length = 864

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 17/106 (16%)
 Frame = -2

Query: 407  IQSHVSRCADDARXXXXXXXXXEHHMSTAEKEAEEVLKNSEE--------------DLQA 270
            +Q+ V+R AD+ R         E      E E  E+    EE               LQA
Sbjct: 684  LQAEVNRLADELRQEQDNYKNAESLRKQLEIEIREITVRLEEAEAFAQREGKRQIAKLQA 743

Query: 269  TLRETDKETQACARELLQLMEGITKFK---ELVVQTSDEMNKDLYE 141
             +R+ + E +A  R L +      KF+   +  VQ SDE  + + E
Sbjct: 744  RIRDLENELEADQRRLREAAASARKFERQWKETVQASDEDRRQVAE 789

>TATB_XANCP (Q8P3H9) Sec-independent protein translocase protein tatB homolog|
          Length = 195

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 19/58 (32%), Positives = 33/58 (56%)
 Frame = -2

Query: 320 EKEAEEVLKNSEEDLQATLRETDKETQACARELLQLMEGITKFKELVVQTSDEMNKDL 147
           E EAEE LK S +D+QA+LRE + + +   +   Q+ +G     +   +  DE+ +D+
Sbjct: 53  ELEAEE-LKRSLQDVQASLREAEGQLRNTQQ---QVEDGARGLHDQARELHDEVGRDI 106

>JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
            (Histocompatibility Y antigen) (H-Y)
          Length = 1548

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -2

Query: 320  EKEAEEVLKNSEEDLQATLRETDKETQ---ACARELLQLMEGITKFKELVVQTSDEMNKD 150
            E++A   LK S++   ATL    +E +        +  L E +TK +  +   ++  N D
Sbjct: 980  EEKAHFCLKASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGD 1039

Query: 149  LYECAEDM 126
             Y C +D+
Sbjct: 1040 HYPCLDDL 1047

>HSP90_SCHPO (P41887) Heat shock protein 90 homolog|
          Length = 704

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = -2

Query: 320 EKEAEEVLKNSEEDLQATLRETDKETQACARELLQLMEGITKFKEL 183
           E+E EEV KN E+D    + E D E++   ++  ++ E  T+ +EL
Sbjct: 221 EEETEEV-KNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEEL 265

>LVA_DROME (Q8MSS1) Protein lava lamp|
          Length = 2779

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = -2

Query: 449  MALMTAQLDSLDREIQSHVSRCADDARXXXXXXXXXEHHMSTAEKEAEEVLKNSEE--DL 276
            +A    +LD L+ ++ SHV R A + R                E+  E V + +EE   L
Sbjct: 1561 LAAKATELDELECDLNSHVERAAAETREL----------CQQLERSQELVAQRTEELQRL 1610

Query: 275  QATLRETDKETQACARELLQL 213
                +E ++E    +RE+  L
Sbjct: 1611 NEEFQEVERERSTLSREVTLL 1631

>RAD50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase|
          Length = 876

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -2

Query: 323 AEKEAEEVLKNSEEDLQATLRETDKETQACARELLQLMEGITKFKELVVQTSDEMNKDLY 144
           AEKE E  L+  EEDL+   RE     ++  REL    E + + +E      +E+ ++L 
Sbjct: 451 AEKELER-LQGREEDLRKERRELKDRLESVRRELEGTKERMWRLRE----RREELERELE 505

Query: 143 ECAE 132
           E  E
Sbjct: 506 EIEE 509

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 276 PGHAEGDRQRNPGVREGAAPAHGGHHEVQG 187
           PGH     QR P    G AP  GGH   +G
Sbjct: 131 PGHLPSHGQRPPSPSHGHAPPSGGHTPPRG 160


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,232,530
Number of Sequences: 219361
Number of extensions: 994864
Number of successful extensions: 3412
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3403
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)