ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal25i23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_938515.1| PREDICTED: Homo sapiens hypothetical protein LO... 44 0.46
2ref|XM_929601.1| PREDICTED: Homo sapiens hypothetical protein LO... 44 0.46
3gb|AC115968.10| Mus musculus chromosome 1, clone RP24-72P6, comp... 42 1.8
4ref|XM_444838.1| Candida glabrata CBS138 hypothetical protein (C... 42 1.8
5emb|CR380947.1| Candida glabrata strain CBS138 chromosome A comp... 42 1.8
6gb|AC119212.15| Mus musculus chromosome 1, clone RP24-192L21, co... 42 1.8
7gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome... 42 1.8
8ref|XM_477566.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
9ref|XM_506269.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 7.1
10gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, co... 40 7.1
11gb|AC099761.8| Mus musculus BAC clone RP23-230J6 from chromosome... 40 7.1
12ref|XM_607985.2| PREDICTED: Bos taurus similar to Thioredoxin-li... 40 7.1
13gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, comp... 40 7.1
14gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, com... 40 7.1
15gb|AC166993.4| Mus musculus BAC clone RP23-467D18 from chromosom... 40 7.1
16gb|AC099606.13| Mus musculus chromosome 7, clone RP23-360N6, com... 40 7.1
17emb|AJ566327.1|FSY566327 Ficus sycomorus microsatellite DNA, clo... 40 7.1
18emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in ... 40 7.1
19gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome... 40 7.1
20gb|AC122505.4| Mus musculus BAC clone RP24-419P3 from chromosome... 40 7.1
21gb|AC122524.3| Mus musculus BAC clone RP24-494L9 from chromosome... 40 7.1
22gb|AC127371.3| Mus musculus BAC clone RP23-35D4 from 15, complet... 40 7.1
23ref|XM_815772.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.1
24gb|AC127598.3| Mus musculus BAC clone RP23-84E16 from 7, complet... 40 7.1
25gb|AC122366.3| Mus musculus BAC clone RP23-447K15 from 14, compl... 40 7.1
26gb|AC114575.8| Mus musculus chromosome 12, clone RP23-152I9, com... 40 7.1
27gb|AC165082.2| Mus musculus BAC clone RP23-412H17 from chromosom... 40 7.1
28emb|AL365496.15| Human DNA sequence from clone RP11-449J3 on chr... 40 7.1
29gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence 40 7.1
30gb|AC102463.12| Mus musculus chromosome 1, clone RP24-328M5, com... 40 7.1
31emb|CR545468.10| Mouse DNA sequence from clone RP23-278H7 on chr... 40 7.1
32emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 i... 40 7.1
33gb|AF387365.1|AF387365 Chlamydomonas reinhardtii pyruvate dehydr... 40 7.1
34gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold 40 7.1
35gb|AC159007.2| Mus musculus BAC clone RP23-9O3 from chromosome 1... 40 7.1
36gb|AC135087.5| Mus musculus BAC clone RP23-270H16 from chromosom... 40 7.1
37gb|AC154336.2| Mus musculus BAC clone RP23-252B13 from chromosom... 40 7.1
38gb|AC160929.2| Mus musculus BAC clone RP24-380G7 from chromosome... 40 7.1
39gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome... 40 7.1
40dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
42gb|AC159150.5| Mus musculus BAC RP23-339M5 (Roswell Park Cancer... 40 7.1
43gb|AC154714.3| Mus musculus BAC clone RP23-129H12 from chromosom... 40 7.1
44dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
45dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
46dbj|BS000054.1| Pan troglodytes chromosome 22 clone:RP43-147F06,... 40 7.1
47emb|CR318656.3| Zebrafish DNA sequence from clone CH211-88D2 in ... 40 7.1
48dbj|AK059375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
49gb|AC125443.8| Mus musculus chromosome 1, clone RP24-493N12, com... 40 7.1
50gb|AC174640.3| Mus musculus BAC clone RP24-576A3 from chromosome... 40 7.1
51gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, co... 40 7.1
52dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.1
53gb|AC134793.10| Mus musculus chromosome 15, clone RP23-159M8, co... 40 7.1
54emb|AL844866.17| Mouse DNA sequence from clone RP23-418O17 on ch... 40 7.1
55emb|BX005482.9| Mouse DNA sequence from clone RP23-146O10 on chr... 40 7.1
56gb|AC126039.3| Mus musculus BAC clone RP24-234N22 from 12, compl... 40 7.1
57emb|BX005231.8| Mouse DNA sequence from clone RP23-392C6 on chro... 40 7.1
58emb|BX005452.7| Mouse DNA sequence from clone RP23-158K12 on chr... 40 7.1
59emb|AL713853.6| Mouse DNA sequence from clone RP23-63C10 on chro... 40 7.1
60emb|AL806532.10| Mouse DNA sequence from clone RP23-387D16 on ch... 40 7.1
61emb|AL844149.4| Mouse DNA sequence from clone RP23-194D5 on chro... 40 7.1
62dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 40 7.1
63emb|AL732449.5| Mouse DNA sequence from clone RP23-191F11 on chr... 40 7.1 
>ref|XM_938515.1| PREDICTED: Homo sapiens hypothetical protein LOC649434 (LOC649434),
           mRNA
          Length = 978

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 425 ccagctgagcagtcatcagagccatg 450
           |||||||||||||| |||||||||||
Sbjct: 226 ccagctgagcagtcctcagagccatg 201
to top
>ref|XM_929601.1| PREDICTED: Homo sapiens hypothetical protein LOC646658 (LOC646658),
           mRNA
          Length = 978

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 425 ccagctgagcagtcatcagagccatg 450
           |||||||||||||| |||||||||||
Sbjct: 226 ccagctgagcagtcctcagagccatg 201
to top
>gb|AC115968.10| Mus musculus chromosome 1, clone RP24-72P6, complete sequence
          Length = 229959

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 345    tttctctagctcttctttcca 365
              |||||||||||||||||||||
Sbjct: 208610 tttctctagctcttctttcca 208630
to top
>ref|XM_444838.1| Candida glabrata CBS138 hypothetical protein (CAGL0A01672g) partial
           mRNA
          Length = 2085

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 339 ttcctttttctctagctcttc 359
           |||||||||||||||||||||
Sbjct: 231 ttcctttttctctagctcttc 211
to top
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence
          Length = 485192

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 339    ttcctttttctctagctcttc 359
              |||||||||||||||||||||
Sbjct: 161998 ttcctttttctctagctcttc 162018
to top
>gb|AC119212.15| Mus musculus chromosome 1, clone RP24-192L21, complete sequence
          Length = 174380

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 345   tttctctagctcttctttcca 365
             |||||||||||||||||||||
Sbjct: 14714 tttctctagctcttctttcca 14734
to top
>gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome 10, complete sequence
          Length = 203909

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 292    ttcttcaaaacctcctctgcttcct 316
              |||||||||||||||| ||||||||
Sbjct: 154814 ttcttcaaaacctcctatgcttcct 154838
to top
>ref|XM_477566.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1081

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ttcaaaacctcctctgcttc 314
           ||||||||||||||||||||
Sbjct: 921 ttcaaaacctcctctgcttc 902
to top
>ref|XM_506269.1| PREDICTED Oryza sativa (japonica cultivar-group), B1120F06.103 mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ttcaaaacctcctctgcttc 314
           ||||||||||||||||||||
Sbjct: 912 ttcaaaacctcctctgcttc 893
to top
>gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, complete sequence
          Length = 210235

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 16648 agagccatgagtcccaacat 16629
to top
>gb|AC099761.8| Mus musculus BAC clone RP23-230J6 from chromosome 10, complete sequence
          Length = 182574

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 118781 agagccatgagtcccaacat 118800
to top
>ref|XM_607985.2| PREDICTED: Bos taurus similar to Thioredoxin-like protein KIAA1162
           precursor (LOC529535), partial mRNA
          Length = 534

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 302 cctcctctgcttccttctca 321
           ||||||||||||||||||||
Sbjct: 325 cctcctctgcttccttctca 306
to top
>gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, complete sequence
          Length = 175313

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 162195 agagccatgagtcccaacat 162176
to top
>gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, complete sequence
          Length = 199243

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 30049 agagccatgagtcccaacat 30068
to top
>gb|AC166993.4| Mus musculus BAC clone RP23-467D18 from chromosome 17, complete
             sequence
          Length = 199776

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 92647 agagccatgagtcccaacat 92666
to top
>gb|AC099606.13| Mus musculus chromosome 7, clone RP23-360N6, complete sequence
          Length = 193975

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 72666 agagccatgagtcccaacat 72647
to top
>emb|AJ566327.1|FSY566327 Ficus sycomorus microsatellite DNA, clone FIGT09E11
          Length = 315

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 ttttctctagctcttctttc 363
           ||||||||||||||||||||
Sbjct: 49  ttttctctagctcttctttc 68
to top
>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7,
             complete sequence
          Length = 196531

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   gtaacaggcacatcactgtc 487
             ||||||||||||||||||||
Sbjct: 42160 gtaacaggcacatcactgtc 42141
to top
>gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome 3, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 154767 agagccatgagtcccaacat 154786
to top
>gb|AC122505.4| Mus musculus BAC clone RP24-419P3 from chromosome 6, complete sequence
          Length = 161366

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   tcttctttccattttctagc 374
             ||||||||||||||||||||
Sbjct: 49509 tcttctttccattttctagc 49528
to top
>gb|AC122524.3| Mus musculus BAC clone RP24-494L9 from chromosome 6, complete
            sequence
          Length = 201568

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  tcttctttccattttctagc 374
            ||||||||||||||||||||
Sbjct: 6126 tcttctttccattttctagc 6107
to top
>gb|AC127371.3| Mus musculus BAC clone RP23-35D4 from 15, complete sequence
          Length = 210688

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 201013 agagccatgagtcccaacat 201032
to top
>ref|XM_815772.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508479.280) partial mRNA
          Length = 1104

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 304 tcctctgcttccttctcagc 323
           ||||||||||||||||||||
Sbjct: 794 tcctctgcttccttctcagc 775
to top
>gb|AC127598.3| Mus musculus BAC clone RP23-84E16 from 7, complete sequence
          Length = 186752

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 115289 agagccatgagtcccaacat 115308
to top
>gb|AC122366.3| Mus musculus BAC clone RP23-447K15 from 14, complete sequence
          Length = 175591

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 60313 agagccatgagtcccaacat 60332
to top
>gb|AC114575.8| Mus musculus chromosome 12, clone RP23-152I9, complete sequence
          Length = 193164

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 81012 agagccatgagtcccaacat 81031
to top
>gb|AC165082.2| Mus musculus BAC clone RP23-412H17 from chromosome 17, complete
             sequence
          Length = 196132

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 13575 agagccatgagtcccaacat 13556
to top
>emb|AL365496.15| Human DNA sequence from clone RP11-449J3 on chromosome 10 Contains the
             3' end of the PCDH15 gene for protocadherin 15 and a novel
             gene, complete sequence
          Length = 173728

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    ttaaagtcaaactttgacaa 82
             ||||||||||||||||||||
Sbjct: 63416 ttaaagtcaaactttgacaa 63435
to top
>gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence
          Length = 199946

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 173356 agagccatgagtcccaacat 173337
to top
>gb|AC102463.12| Mus musculus chromosome 1, clone RP24-328M5, complete sequence
          Length = 155111

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 442  agagccatgagtcccaacat 461
            ||||||||||||||||||||
Sbjct: 2673 agagccatgagtcccaacat 2654
to top
>emb|CR545468.10| Mouse DNA sequence from clone RP23-278H7 on chromosome X, complete
             sequence
          Length = 38097

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 35008 agagccatgagtcccaacat 35027



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 20862 agagccatgagtcccaacat 20843
to top
>emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 in linkage group 10,
             complete sequence
          Length = 195419

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   tacaggtctttattcatctc 164
             ||||||||||||||||||||
Sbjct: 46942 tacaggtctttattcatctc 46923
to top
>gb|AF387365.1|AF387365 Chlamydomonas reinhardtii pyruvate dehydrogenase kinase-like protein
            (pdk) gene, complete cds
          Length = 5813

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 428  gctgagcagtcatcagagccatga 451
            |||| |||||||||||||||||||
Sbjct: 3827 gctgggcagtcatcagagccatga 3804
to top
>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold
          Length = 387541

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    cctcctctgcttccttctca 321
              ||||||||||||||||||||
Sbjct: 304407 cctcctctgcttccttctca 304388
to top
>gb|AC159007.2| Mus musculus BAC clone RP23-9O3 from chromosome 14, complete sequence
          Length = 172108

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 170719 agagccatgagtcccaacat 170738
to top
>gb|AC135087.5| Mus musculus BAC clone RP23-270H16 from chromosome 1, complete sequence
          Length = 172385

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 129649 agagccatgagtcccaacat 129630
to top
>gb|AC154336.2| Mus musculus BAC clone RP23-252B13 from chromosome 9, complete sequence
          Length = 184358

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 56366 agagccatgagtcccaacat 56347
to top
>gb|AC160929.2| Mus musculus BAC clone RP24-380G7 from chromosome 12, complete sequence
          Length = 163333

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ctcctctgcttccttctcag 322
             ||||||||||||||||||||
Sbjct: 53403 ctcctctgcttccttctcag 53422
to top
>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence
          Length = 198179

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 126881 agagccatgagtcccaacat 126900
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 204      gccctccatgagctggagcagctc 227
                |||| |||||||||||||||||||
Sbjct: 14474713 gcccgccatgagctggagcagctc 14474736
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 295      ttcaaaacctcctctgcttc 314
                ||||||||||||||||||||
Sbjct: 11546362 ttcaaaacctcctctgcttc 11546381
to top
>gb|AC159150.5| Mus musculus  BAC RP23-339M5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205775

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   ctcatgtgatgttccttttt 347
             ||||||||||||||||||||
Sbjct: 85251 ctcatgtgatgttccttttt 85270
to top
>gb|AC154714.3| Mus musculus BAC clone RP23-129H12 from chromosome 12, complete sequence
          Length = 200017

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 199625 agagccatgagtcccaacat 199644
to top
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   gccctccatgagctggagcagctc 227
             |||| |||||||||||||||||||
Sbjct: 74278 gcccgccatgagctggagcagctc 74301
to top
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    ttcaaaacctcctctgcttc 314
              ||||||||||||||||||||
Sbjct: 110020 ttcaaaacctcctctgcttc 110039
to top
>dbj|BS000054.1| Pan troglodytes chromosome 22 clone:RP43-147F06, map 22, complete
             sequences
          Length = 145481

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   tcttctgagttcttcaaaac 302
             ||||||||||||||||||||
Sbjct: 40569 tcttctgagttcttcaaaac 40550
to top
>emb|CR318656.3| Zebrafish DNA sequence from clone CH211-88D2 in linkage group 22,
             complete sequence
          Length = 87766

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 50    actttttgacaagttaaagtcaaacttt 77
             ||||||||||| ||||||||||| ||||
Sbjct: 46179 actttttgacatgttaaagtcaagcttt 46206
to top
>dbj|AK059375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-F06, full
           insert sequence
          Length = 1081

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ttcaaaacctcctctgcttc 314
           ||||||||||||||||||||
Sbjct: 921 ttcaaaacctcctctgcttc 902
to top
>gb|AC125443.8| Mus musculus chromosome 1, clone RP24-493N12, complete sequence
          Length = 156248

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 57943 agagccatgagtcccaacat 57924
to top
>gb|AC174640.3| Mus musculus BAC clone RP24-576A3 from chromosome 6, complete sequence
          Length = 270621

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   tcttctttccattttctagc 374
             ||||||||||||||||||||
Sbjct: 32732 tcttctttccattttctagc 32751
to top
>gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, complete sequence
          Length = 149484

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 66718 agagccatgagtcccaacat 66699
to top
>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    tcttctgagttcttcaaaac 302
              ||||||||||||||||||||
Sbjct: 312310 tcttctgagttcttcaaaac 312291
to top
>gb|AC134793.10| Mus musculus chromosome 15, clone RP23-159M8, complete sequence
          Length = 216860

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 163177 agagccatgagtcccaacat 163158
to top
>emb|AL844866.17| Mouse DNA sequence from clone RP23-418O17 on chromosome X, complete
             sequence
          Length = 173461

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 46539 agagccatgagtcccaacat 46520
to top
>emb|BX005482.9| Mouse DNA sequence from clone RP23-146O10 on chromosome X, complete
              sequence
          Length = 169991

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 163671 agagccatgagtcccaacat 163690
to top
>gb|AC126039.3| Mus musculus BAC clone RP24-234N22 from 12, complete sequence
          Length = 154037

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   ctcctctgcttccttctcag 322
             ||||||||||||||||||||
Sbjct: 29851 ctcctctgcttccttctcag 29832
to top
>emb|BX005231.8| Mouse DNA sequence from clone RP23-392C6 on chromosome X, complete
              sequence
          Length = 129970

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 111278 agagccatgagtcccaacat 111297
to top
>emb|BX005452.7| Mouse DNA sequence from clone RP23-158K12 on chromosome X, complete
              sequence
          Length = 167118

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    ctgggtttctttgtcggtct 259
              ||||||||||||||||||||
Sbjct: 127856 ctgggtttctttgtcggtct 127837
to top
>emb|AL713853.6| Mouse DNA sequence from clone RP23-63C10 on chromosome 2, complete
              sequence
          Length = 178652

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 165758 agagccatgagtcccaacat 165739
to top
>emb|AL806532.10| Mouse DNA sequence from clone RP23-387D16 on chromosome X, complete
              sequence
          Length = 209714

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    agagccatgagtcccaacat 461
              ||||||||||||||||||||
Sbjct: 126045 agagccatgagtcccaacat 126064
to top
>emb|AL844149.4| Mouse DNA sequence from clone RP23-194D5 on chromosome 4, complete
             sequence
          Length = 199774

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 73498 agagccatgagtcccaacat 73479
to top
>dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region,
              clone:B330A3, complete sequence
          Length = 160920

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    tcttctgagttcttcaaaac 302
              ||||||||||||||||||||
Sbjct: 153709 tcttctgagttcttcaaaac 153690
to top
>emb|AL732449.5| Mouse DNA sequence from clone RP23-191F11 on chromosome X, complete
             sequence
          Length = 160779

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   agagccatgagtcccaacat 461
             ||||||||||||||||||||
Sbjct: 74786 agagccatgagtcccaacat 74805


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,875,838
Number of Sequences: 3902068
Number of extensions: 4875838
Number of successful extensions: 108958
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108757
Number of HSP's gapped (non-prelim): 201
length of query: 528
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 505
effective length of database: 17,143,297,704
effective search space: 8657365340520
effective search space used: 8657365340520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top