| Clone Name | rbaal25i22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetati... | 32 | 0.71 | 2 | LEPA_SHEON (Q8EH83) GTP-binding protein lepA | 32 | 0.93 | 3 | LEPA_PHOPR (Q6LMS0) GTP-binding protein lepA | 31 | 1.6 | 4 | CSD_VIBCH (Q9KPQ7) Probable cysteine desulfurase (EC 2.8.1.7) | 31 | 1.6 | 5 | LEPA_VIBPA (Q87LN7) GTP-binding protein lepA | 30 | 3.5 | 6 | LEPA_BDEBA (P60930) GTP-binding protein lepA | 29 | 7.8 |
|---|
>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein B) Length = 254 Score = 32.3 bits (72), Expect = 0.71 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 129 IKWRCHGAGYRRTRSQCSTGWWHRST 206 + W CHGAGY+R + TG+ RS+ Sbjct: 14 VAWPCHGAGYQRFPLRMKTGYGERSS 39
>LEPA_SHEON (Q8EH83) GTP-binding protein lepA| Length = 596 Score = 32.0 bits (71), Expect = 0.93 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%) Frame = -3 Query: 435 IAKDNNSDPVTGYVRISHQVYN-----VKEEYERLRDAVNKL 325 +AK+ P+ G+ ++ QVY +EYE RDA+NKL Sbjct: 276 LAKNGADKPLPGFKKVKPQVYAGVFPISTDEYENFRDALNKL 317
>LEPA_PHOPR (Q6LMS0) GTP-binding protein lepA| Length = 597 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%) Frame = -3 Query: 432 AKDNNSDPVTGYVRISHQVYN-----VKEEYERLRDAVNKL 325 AKD + P+ G+ ++ QVY ++YE RDA+ KL Sbjct: 277 AKDGSETPLPGFKKVKPQVYAGLFPISSDDYENFRDALGKL 317
>CSD_VIBCH (Q9KPQ7) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 404 Score = 31.2 bits (69), Expect = 1.6 Identities = 17/29 (58%), Positives = 19/29 (65%) Frame = -3 Query: 408 VTGYVRISHQVYNVKEEYERLRDAVNKLV 322 V G VRIS VYN EE ERL A++K V Sbjct: 373 VKGTVRISFGVYNSAEEVERLIAAIHKAV 401
>LEPA_VIBPA (Q87LN7) GTP-binding protein lepA| Length = 597 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 5/42 (11%) Frame = -3 Query: 435 IAKDNNSDPVTGYVRISHQVYN-----VKEEYERLRDAVNKL 325 +AK+ + P+ G+ ++ QVY ++YE RDA+ KL Sbjct: 276 LAKNGSDKPLPGFKKVKPQVYAGLFPVSSDDYENFRDALGKL 317
>LEPA_BDEBA (P60930) GTP-binding protein lepA| Length = 599 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%) Frame = -3 Query: 432 AKDNNSDPVTGYVRISHQVYN-----VKEEYERLRDAVNKL 325 AK + P+ G+ RI V+ V EYE L+DA++KL Sbjct: 279 AKHPATQPLAGFQRIKPMVFAGIFPVVASEYENLKDALDKL 319 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,687,086 Number of Sequences: 219361 Number of extensions: 1360876 Number of successful extensions: 3747 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3642 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3746 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)