ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal25i18 |
|---|---|
| Clone Library Name | barley_pub |
>MAF1_HUMAN (Q9H063) Repressor of RNA polymerase III transcription MAF1 homolog| Length = 256 Score = 82.0 bits (201), Expect = 1e-15 Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 3/91 (3%) Frame = -3 Query: 541 AARNEGSSLLDSMTKAIDEVIKIRECDIYSYNPDSDGDPFLETGAIWSVNFFFYHRKLKR 362 A R + L + A+DE I + ECDIYSYNPD D DPF E G++WS N+FFY+++LKR Sbjct: 138 AVREDFKDLKPQLWNAVDEEICLAECDIYSYNPDLDSDPFGEDGSLWSFNYFFYNKRLKR 197 Query: 361 VVSFRCCCTSKFAGDDFLAGALSD---GEEE 278 +V F C S AG D GEEE Sbjct: 198 IVFFSCRSISGSTYTPSEAGNELDMELGEEE 228
>MAF1_MOUSE (Q9D0U6) Repressor of RNA polymerase III transcription MAF1 homolog| Length = 258 Score = 82.0 bits (201), Expect = 1e-15 Identities = 35/66 (53%), Positives = 47/66 (71%) Frame = -3 Query: 541 AARNEGSSLLDSMTKAIDEVIKIRECDIYSYNPDSDGDPFLETGAIWSVNFFFYHRKLKR 362 A R + +L + A+DE I + ECDIYSYNPD D DPF E G++WS N+FFY+++LKR Sbjct: 138 AVREDFKALKPQLWNAVDEEICLAECDIYSYNPDLDSDPFGEDGSLWSFNYFFYNKRLKR 197 Query: 361 VVSFRC 344 +V F C Sbjct: 198 IVFFSC 203
>MAF1_BRARE (Q6PGU2) Repressor of RNA polymerase III transcription MAF1 homolog| Length = 247 Score = 79.3 bits (194), Expect = 6e-15 Identities = 36/72 (50%), Positives = 48/72 (66%) Frame = -3 Query: 541 AARNEGSSLLDSMTKAIDEVIKIRECDIYSYNPDSDGDPFLETGAIWSVNFFFYHRKLKR 362 AA S L + +A+D+ I + ECDIYSYNPD D DP+ E G +WS N+FFY+++LKR Sbjct: 137 AAGEAYSHLQPQLWEALDKEISLAECDIYSYNPDLDSDPYGEEGNLWSFNYFFYNKRLKR 196 Query: 361 VVSFRCCCTSKF 326 +V F C S F Sbjct: 197 IVFFTCRSVSLF 208
>YEJC_SCHPO (O14109) Hypothetical protein C31G5.12c in chromosome I| Length = 215 Score = 55.8 bits (133), Expect = 8e-08 Identities = 20/57 (35%), Positives = 38/57 (66%) Frame = -3 Query: 526 GSSLLDSMTKAIDEVIKIRECDIYSYNPDSDGDPFLETGAIWSVNFFFYHRKLKRVV 356 G ++ + + ID I + +C +YSY PDSD DP+ + IW +++FF+++ +KR++ Sbjct: 112 GRLSVNGIWEIIDRHINLSDCSVYSYTPDSDSDPYGDDALIWGMSYFFFNKNMKRML 168
>MAF1_ASHGO (Q757K3) Repressor of RNA polymerase III transcription MAF1| Length = 397 Score = 35.4 bits (80), Expect = 0.11 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Frame = -3 Query: 499 KAIDEVIKIRECDIYSYNPDSDGDPFL--ETGAIWSVNFFFYHRKLKRVVSF 350 + I+ + + +C Y YNP + FL E G +WS+ +F +++K KRV F Sbjct: 275 ETINAHMDLADCVFYQYNPQ---ESFLDDEPGHLWSLMWFMFNKKRKRVAYF 323
>MAF1_YEAST (P41910) Repressor of RNA polymerase III transcription MAF1| Length = 395 Score = 35.0 bits (79), Expect = 0.14 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = -3 Query: 499 KAIDEVIKIRECDIYSYNPDSDGDPFLET--GAIWSVNFFFYHRKLKRVVSFRCCCTSKF 326 + I+ + + +C ++ Y+P + FLE G +W++ F Y+RK KRV C+ Sbjct: 288 EVINSHMTLSDCVLFQYSPSNS---FLEDEPGYLWNLIGFLYNRKRKRVAYLYLICSRLN 344 Query: 325 AGDDFLAGALSDGEEEDAL 269 + S GE EDAL Sbjct: 345 S---------STGEVEDAL 354
>MAF1_CANGA (Q6FIZ7) Repressor of RNA polymerase III transcription MAF1| Length = 391 Score = 31.2 bits (69), Expect = 2.0 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -3 Query: 499 KAIDEVIKIRECDIYSYNPDSDGDPFL--ETGAIWSVNFFFYHRKLKRV 359 + I+ + + +C +Y Y P FL E G +WS+ FF+++K KRV Sbjct: 280 EVINSHMTLSDCVLYQYCPTQS---FLDDEPGHLWSLIGFFFNKKRKRV 325
>FLGE_AQUAE (O67711) Flagellar hook protein flgE| Length = 482 Score = 31.2 bits (69), Expect = 2.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 179 PYELYITQTGHTGWLVMFLAEPSQSYVHVD 268 P ++Y +TG W V FLA + Y++VD Sbjct: 214 PADIYFVKTGTNQWKVYFLASLKERYINVD 243
>FZD7_HUMAN (O75084) Frizzled 7 precursor (Frizzled-7) (Fz-7) (hFz7) (FzE3)| Length = 574 Score = 30.4 bits (67), Expect = 3.4 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Frame = +1 Query: 148 SIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 294 S+ +P T+ + +Y R HW + KS PC H PP P Sbjct: 475 SVLYTVPATIVLACYFYEQAFREHWERTWLLQTCKSYAVPCPPGHFPPMSP 525
>PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 472 Score = 29.6 bits (65), Expect = 5.8 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 12/71 (16%) Frame = +2 Query: 80 GQKCMLSKQTNKVTLKVSTGXLPAYVVSYREL------------SPYELYITQTGHTGWL 223 GQK ++ ++ +T + P S L +P+E+Y TGH GW+ Sbjct: 107 GQKALMGASSSALTKHTPSASQPTTHDSLTNLGANLTQSKPAWHAPWEIYRVITGHQGWV 166 Query: 224 VMFLAEPSQSY 256 EP + Sbjct: 167 RSVCVEPENQW 177
>FZD2_HUMAN (Q14332) Frizzled 2 precursor (Frizzled-2) (Fz-2) (hFz2) (FzE2)| Length = 565 Score = 29.6 bits (65), Expect = 5.8 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Frame = +1 Query: 148 SIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 294 S+ +P T+ I +Y R HW V KS+ PC + + P P Sbjct: 466 SVLYTVPATIVIACYFYEQAFREHWERSWVSQHCKSLAIPCPAHYTPRMSP 516
>FZD2_RAT (Q08464) Frizzled 2 precursor (Frizzled-2) (Fz-2) (rFz2)| Length = 570 Score = 29.6 bits (65), Expect = 5.8 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Frame = +1 Query: 148 SIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 294 S+ +P T+ I +Y R HW V KS+ PC + + P P Sbjct: 471 SVLYTVPATIVIACYFYEQAFREHWERSWVSQHCKSLAIPCPAHYTPRTSP 521
>FZD2_MOUSE (Q9JIP6) Frizzled 2 precursor (Frizzled-2) (Fz-2) (mFz2) (mFz10)| Length = 570 Score = 29.6 bits (65), Expect = 5.8 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Frame = +1 Query: 148 SIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 294 S+ +P T+ I +Y R HW V KS+ PC + + P P Sbjct: 471 SVLYTVPATIVIACYFYEQAFREHWERSWVSQHCKSLAIPCPAHYTPRMSP 521
>FZD1_XENLA (Q9I9M5) Frizzled 1 precursor (Frizzled-1) (Fz-1) (Xfz1)| Length = 559 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Frame = +1 Query: 148 SIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 294 S+ +P T+ I +Y R W + K+ PC ST PP P Sbjct: 460 SVLYTVPATIVIACYFYEQAFREQWEKSWISQSCKTYAIPCPSTGHPPMSP 510
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Xsiah-2) Length = 313 Score = 29.3 bits (64), Expect = 7.6 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = +2 Query: 284 LAIRERTSKEIIPCKFASTAAAKAHYPLELPVVEEKVD-RPYG-PC 415 LA+ + S + PCK+AST + + + E P E+ + RPY PC Sbjct: 114 LAMEKVASAVLFPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPC 159
>FP2_MYTGA (Q25464) Adhesive plaque matrix protein 2 precursor (Foot protein| 2) (MGFP2) (MGFP-2) Length = 473 Score = 28.9 bits (63), Expect = 9.9 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -2 Query: 314 FPCWCALGWRGGRCVDR 264 + C CA GWRG C D+ Sbjct: 364 YTCKCAYGWRGRHCTDK 380
>CLTR2_MOUSE (Q920A1) Cysteinyl leukotriene receptor 2 (CysLTR2)| Length = 309 Score = 28.9 bits (63), Expect = 9.9 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +1 Query: 73 NGRPKVYALQTDKQSHAKSFYRXTASIRSFL-PGTVAIRAVYYTNRSHWLVGHVPSRTKS 249 NG LQT K+S + + + + FL T+ RA YY S+W+ G + R S Sbjct: 40 NGFSIYVFLQTCKKSTSVNVFMLNLATSDFLFISTLPFRADYYFRGSNWIFGDLACRVMS 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,557,152 Number of Sequences: 219361 Number of extensions: 1568265 Number of successful extensions: 4271 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3929 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4269 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
