ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal25i16 |
|---|---|
| Clone Library Name | barley_pub |
>1A1D_THEMA (Q9WY68) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 312 Score = 59.3 bits (142), Expect = 7e-09 Identities = 28/71 (39%), Positives = 48/71 (67%) Frame = -2 Query: 536 IQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVL 357 + + +G GYA+ ++E+++ +K++A+ GI+LDPVY+ K M+ +M N K VL Sbjct: 240 VDDYRGPGYAIPSSEDVEILKEVASIEGIILDPVYTAKAFRGMI-EMFRNSEK----NVL 294 Query: 356 FVHTGGLLGLY 324 F+HTGG+ GL+ Sbjct: 295 FIHTGGIFGLF 305
>1A1D_PYRHO (O57809) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 325 Score = 53.9 bits (128), Expect = 3e-07 Identities = 27/72 (37%), Positives = 42/72 (58%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 333 Y T E + ++ + GI+LDPVY+GK Y ++ D+A G K+LF+HTGG+ Sbjct: 256 YGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLV-DLARKGEL--GEKILFIHTGGIS 312 Query: 332 GLYDKVDQMSSL 297 G + D++ SL Sbjct: 313 GTFHYGDKLLSL 324
>1A1D_PYRAB (Q9V2L2) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 330 Score = 52.0 bits (123), Expect = 1e-06 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 333 Y E K +K + G++LDPVY+GK Y ++ D+A G VLF+HTGGL Sbjct: 260 YGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLM-DLAKKGDL--GESVLFIHTGGLP 316 Query: 332 GLYDKVDQMSSL 297 G++ ++M L Sbjct: 317 GIFHYGEEMLEL 328
>1A1D_PYRFU (Q8U4R3) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 329 Score = 50.4 bits (119), Expect = 3e-06 Identities = 26/71 (36%), Positives = 41/71 (57%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 333 Y T E + ++ + G++LDPVY+GK Y +L D+A G K+LF+HTGG+ Sbjct: 260 YGKITREVAETIRLVGTKEGVILDPVYTGKAFYGLL-DLAKKGEL--GEKILFIHTGGIS 316 Query: 332 GLYDKVDQMSS 300 G + D++ S Sbjct: 317 GTFHYGDKILS 327
>DCYD_SHIFL (P59330) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 45.8 bits (107), Expect = 8e-05 Identities = 24/64 (37%), Positives = 37/64 (57%) Frame = -2 Query: 515 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 336 GY + E ++ VK +A GI+LDPVY+GK ++ ++ K G +LF+HTGG Sbjct: 259 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 317 Query: 335 LGLY 324 L+ Sbjct: 318 PALF 321
>DCYD_ECOLI (P76316) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 45.8 bits (107), Expect = 8e-05 Identities = 24/64 (37%), Positives = 37/64 (57%) Frame = -2 Query: 515 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 336 GY + E ++ VK +A GI+LDPVY+GK ++ ++ K G +LF+HTGG Sbjct: 259 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 317 Query: 335 LGLY 324 L+ Sbjct: 318 PALF 321
>DCYD_ECOL6 (P59329) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 45.8 bits (107), Expect = 8e-05 Identities = 24/64 (37%), Positives = 37/64 (57%) Frame = -2 Query: 515 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 336 GY + E ++ VK +A GI+LDPVY+GK ++ ++ K G +LF+HTGG Sbjct: 259 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 317 Query: 335 LGLY 324 L+ Sbjct: 318 PALF 321
>DCYD_ECO57 (Q8XBC7) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 45.8 bits (107), Expect = 8e-05 Identities = 24/64 (37%), Positives = 37/64 (57%) Frame = -2 Query: 515 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 336 GY + E ++ VK +A GI+LDPVY+GK ++ ++ K G +LF+HTGG Sbjct: 259 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 317 Query: 335 LGLY 324 L+ Sbjct: 318 PALF 321
>DCYD_SALTY (Q8ZNT7) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/64 (32%), Positives = 37/64 (57%) Frame = -2 Query: 515 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 336 GY + ++ VK +A+ G++LDPVY+GK ++ ++ +G +LF+HTGG Sbjct: 259 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 317 Query: 335 LGLY 324 L+ Sbjct: 318 PALF 321
>DCYD_YERPE (Q8ZF73) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 330 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/63 (39%), Positives = 34/63 (53%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 333 Y M E + +K +A GI+LDPVY+GK A A L D + +LF+HTGG Sbjct: 263 YGMPNEEGIAAIKLLARLEGILLDPVYTGK-AMAGLLDGIEQQKFCDKGPILFIHTGGAP 321 Query: 332 GLY 324 L+ Sbjct: 322 ALF 324
>1A1D_PSEUD (Q00740) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/74 (31%), Positives = 37/74 (50%) Frame = -2 Query: 548 DIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNG 369 D+V + G Y + L+ ++ A G++ DPVY GK + M+ +M N G Sbjct: 256 DVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMI-EMVRNGEFPEG 314 Query: 368 RKVLFVHTGGLLGL 327 +VL+ H GG+ L Sbjct: 315 SRVLYAHLGGVPAL 328
>1A1D_PSESM (Q87YW7) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 41.2 bits (95), Expect = 0.002 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 333 Y + L+ ++ A G++ DPVY GK + M+ DM N G KVL+ H GG+ Sbjct: 268 YGLPNDGTLEAIRLCARLEGVLTDPVYEGKSMHGMI-DMVRNGEFPEGSKVLYAHLGGVP 326 Query: 332 GL 327 L Sbjct: 327 AL 328
>DCYD_SALTI (Q8Z5S9) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/64 (32%), Positives = 36/64 (56%) Frame = -2 Query: 515 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 336 GY + ++ VK +A G++LDPVY+GK ++ ++ +G +LF+HTGG Sbjct: 259 GYGVPNDAGMEAVKLLANLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 317 Query: 335 LGLY 324 L+ Sbjct: 318 PALF 321
>1A1D_BURPS (Q63KN7) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 40.0 bits (92), Expect = 0.004 Identities = 23/78 (29%), Positives = 38/78 (48%) Frame = -2 Query: 560 LDSHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPS 381 + S D+V + G Y + L+ ++ A G++ DPVY GK + M++ + Sbjct: 252 ITSADVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMIEKVRLGEF 311 Query: 380 KWNGRKVLFVHTGGLLGL 327 G KVL+ H GG+ L Sbjct: 312 P-AGSKVLYAHLGGVPAL 328
>1A1D_BURMA (Q62CE3) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 40.0 bits (92), Expect = 0.004 Identities = 23/78 (29%), Positives = 38/78 (48%) Frame = -2 Query: 560 LDSHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPS 381 + S D+V + G Y + L+ ++ A G++ DPVY GK + M++ + Sbjct: 252 ITSADVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMIEKVRLGEF 311 Query: 380 KWNGRKVLFVHTGGLLGL 327 G KVL+ H GG+ L Sbjct: 312 P-AGSKVLYAHLGGVPAL 328
>1A1D_VARPD (Q6J256) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 37.0 bits (84), Expect = 0.038 Identities = 22/74 (29%), Positives = 36/74 (48%) Frame = -2 Query: 548 DIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNG 369 D+V + G Y + L+ ++ A G++ DPVY GK + M++ + G Sbjct: 256 DVVLDRRFGGPEYGLPNEGTLEAIRLSARFEGMLTDPVYEGKSMHGMIEKVRLGEFP-AG 314 Query: 368 RKVLFVHTGGLLGL 327 KVL+ H GG+ L Sbjct: 315 SKVLYAHLGGVPAL 328
>1A1D_SCHPO (Q9URX3) Probable 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) (ACCD) Length = 338 Score = 37.0 bits (84), Expect = 0.038 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 339 Y + ++ +K A G++ DPVY GK ++ + N G KVL++H GG Sbjct: 268 YGIPNEGTIEAIKLCGATEGVLTDPVYEGKSMQGLI-HLVRNNEIAEGSKVLYIHLGG 324
>1A1D_RALSO (Q8XS35) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.6 bits (83), Expect = 0.050 Identities = 22/74 (29%), Positives = 34/74 (45%) Frame = -2 Query: 548 DIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNG 369 D+V G Y + L+ ++ A G++ DPVY GK + M+ D G Sbjct: 256 DVVLDTRYGGPEYGLPNEGTLEAIRLCARQEGMLTDPVYEGKSMHGMI-DRVRGGEFPEG 314 Query: 368 RKVLFVHTGGLLGL 327 +VL+ H GG+ L Sbjct: 315 SRVLYAHLGGVPAL 328
>1A1D_PSEPU (Q5PWZ8) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.6 bits (83), Expect = 0.050 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 339 Y + L+ ++ + G++ DPVY GK + M+ +M +G KVL+ H GG Sbjct: 268 YGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGMI-EMVRRGEFPDGSKVLYAHLGG 324
>1A1D_RHILO (Q98AM7) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 337 Score = 36.2 bits (82), Expect = 0.065 Identities = 20/74 (27%), Positives = 36/74 (48%) Frame = -2 Query: 560 LDSHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPS 381 L D+V +++ Y + + E + ++ A G++ DPVY GK M+ D+ Sbjct: 251 LAEDDVVLLEDYAHPRYGIPSEETKEAIRLCARLEGMITDPVYEGKSMQGMI-DLVQKGF 309 Query: 380 KWNGRKVLFVHTGG 339 G ++L+ H GG Sbjct: 310 FPAGSRILYAHLGG 323
>1A1D_BRAJA (Q89XR6) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 337 Score = 36.2 bits (82), Expect = 0.065 Identities = 20/70 (28%), Positives = 34/70 (48%) Frame = -2 Query: 548 DIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNG 369 D+V I++ Y + + E + ++ A ++ DPVY GK ++ D+ G Sbjct: 255 DVVLIEDYAYPAYGVPSEETKEAIRLTARLEAMITDPVYEGKSMQGLI-DLTQKGYFEKG 313 Query: 368 RKVLFVHTGG 339 KVL+ H GG Sbjct: 314 AKVLYAHLGG 323
>1A1D_PSES0 (P30297) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.2 bits (82), Expect = 0.065 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 339 Y + L+ ++ + G++ DPVY GK + M+ +M G KVL+ H GG Sbjct: 268 YGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGMI-EMVRRGEFPEGSKVLYAHLGG 324
>1A1D_PSEFL (Q51813) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.2 bits (82), Expect = 0.065 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 339 Y + L+ ++ + G++ DPVY GK + M+ +M G KVL+ H GG Sbjct: 268 YGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGMI-EMVRRGEFPEGSKVLYAHLGG 324
>1A1D_ENTCL (Q9ZHW3) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.2 bits (82), Expect = 0.065 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 339 Y + L+ ++ + G++ DPVY GK + M+ +M G KVL+ H GG Sbjct: 268 YGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGMI-EMVRRGEFPEGSKVLYAHLGG 324
>1A1D_WILSA (Q7M523) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 341 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGK---GAYAMLKDMAANPSKWNGRKVLFVHTG 342 Y + ++ ++ A G++ DPVY GK G A++K+ P G VL+VH G Sbjct: 269 YGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIALIKEDYFKP----GANVLYVHLG 324 Query: 341 G 339 G Sbjct: 325 G 325
>1A1D_RHILV (Q93AG0) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 339 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 339 Y + + E + ++ A ++ DPVY GK M+ D+A G KVL+ H GG Sbjct: 269 YGVPSEETNEAIRLAARTEAMITDPVYEGKSMQGMI-DLARKGFFPEGSKVLYAHLGG 325
>1A1D_AGRTU (Q9AHF0) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 337 Score = 33.9 bits (76), Expect = 0.32 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = -2 Query: 548 DIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNG 369 +IV + + Y + + E + ++ A ++ DPVY GK M+ D+ G Sbjct: 255 EIVILNDYAYPAYGVPSNETNEAIRLAARTEAMITDPVYEGKSMQGMI-DLTRKGFFPKG 313 Query: 368 RKVLFVHTGG 339 KVL+ H GG Sbjct: 314 SKVLYAHLGG 323
>1A1D_CRYNE (Q5KMX3) Probable 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) (ACCD) Length = 345 Score = 33.5 bits (75), Expect = 0.42 Identities = 18/58 (31%), Positives = 27/58 (46%) Frame = -2 Query: 512 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 339 Y + E + +K A + DPVY GK M++ + K G VL++H GG Sbjct: 275 YGIPDDETIAAMKLAAQTDAFITDPVYEGKSMAGMIRLVKEGAIK-EGSNVLYIHLGG 331
>Y474_TREPA (O83487) UPF0082 protein TP0474| Length = 245 Score = 30.0 bits (66), Expect = 4.6 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = -2 Query: 539 SIQNAKGLGYAMNTAEELKFVKDIAAATGIV-LDPVYSGKGAYAMLKDMAANPSKWNGRK 363 +I++AKG A KF+K+I+ A + DP + + A+LK AAN K N + Sbjct: 9 TIKHAKGAADAKRGQLFTKFIKEISVAARMAGGDPQANPRLRTAILKARAANMPKDNIER 68 Query: 362 VLFVHTGGLLG 330 + TG L G Sbjct: 69 AIKKGTGELSG 79
>GCH1_CHRVO (Q7NYZ2) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 206 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -2 Query: 557 DSHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGA 417 D HD + Q + A + V D+ A+GI +DP+++GK A Sbjct: 5 DDHDHAACQRPLERVRPFDAAAFERAVADMLTASGIAIDPIHTGKTA 51
>LYAM3_HUMAN (P16109) P-selectin precursor (Granule membrane protein 140)| (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (CD62P antigen) Length = 830 Score = 29.3 bits (64), Expect = 7.9 Identities = 12/46 (26%), Positives = 24/46 (52%) Frame = -3 Query: 238 VRCFDCYAPETASIMRWSSRNVIILKSICSYVCERKFRIDG*RGVK 101 ++C + +APE S+ +R + S C + C F+++G V+ Sbjct: 570 IKCPELFAPEQGSLDCSDTRGEFNVGSTCHFSCNNGFKLEGPNNVE 615
>YS74_CAEEL (Q09618) Hypothetical protein ZK892.4 in chromosome III| Length = 340 Score = 29.3 bits (64), Expect = 7.9 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -2 Query: 506 MNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSK-WNGRKVLFV 351 + E++K V+D+ + ++LDP G L+ M +PS WN K L + Sbjct: 58 LKNPEDIKKVRDLCQTSDVLLDPYRPG-----TLEKMGLDPSTLWNNNKGLII 105
>RPA1_RAT (O54889) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)| (RNA polymerase I 194 kDa subunit) (RPA194) Length = 1716 Score = 29.3 bits (64), Expect = 7.9 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -2 Query: 560 LDSHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDP 438 L S+DI ++ N G+ A+ E K +KD+ A GI +DP Sbjct: 1596 LYSNDIHAVANTYGIEAALRVIE--KEIKDVFAVYGIAVDP 1634 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,921,253 Number of Sequences: 219361 Number of extensions: 1689817 Number of successful extensions: 4174 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4029 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4157 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
