ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal25i09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 174 2e-40
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
3gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome... 174 2e-40
4dbj|AK067660.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
5dbj|AK065181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
6dbj|AK064951.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
7ref|XM_470643.1| Oryza sativa (japonica cultivar-group), predic... 172 7e-40
8gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 48 0.026
9gb|AC134831.3| Mus musculus BAC clone RP24-500P4 from chromosome... 42 1.6
10gb|AC161249.2| Mus musculus BAC clone RP24-541G2 from chromosome... 42 1.6
11ref|XM_744651.1| Aspergillus fumigatus Af293 disulfide isomerase... 42 1.6
12gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, com... 42 1.6
13dbj|AK097672.1| Homo sapiens cDNA FLJ40353 fis, clone TESTI20335... 42 1.6
14ref|XM_940925.1| PREDICTED: Homo sapiens hypothetical protein LO... 42 1.6
15gb|AF363787.2|AF363787 Aspergillus fumigatus protein disulfide i... 42 1.6
16dbj|AK034074.1| Mus musculus adult male diencephalon cDNA, RIKEN... 42 1.6
17emb|AL928584.23| Mouse DNA sequence from clone RP23-251I16 on ch... 42 1.6
18gb|AC154386.2| Mus musculus BAC clone RP23-27A13 from 13, comple... 42 1.6
19gb|AC154511.2| Mus musculus BAC clone RP24-69N19 from 13, comple... 42 1.6
20emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chr... 42 1.6
21gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 6.4
22gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, co... 40 6.4
23gb|AC146030.3| Pan troglodytes BAC clone RP43-124E21 from chromo... 40 6.4
24gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 6.4
25gb|AE006089.1| Pasteurella multocida subsp. multocida str. Pm70 ... 40 6.4
26gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 6.4
27gb|AC102420.10| Mus musculus chromosome 8, clone RP24-553O21, co... 40 6.4
28gb|AC166570.2| Mus musculus chromosome 18, clone RP24-74O22, com... 40 6.4
29gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosom... 40 6.4
30gb|AC123053.4| Mus musculus BAC clone RP24-374O20 from chromosom... 40 6.4
31gb|AC127316.3| Mus musculus BAC clone RP23-222G16 from 13, compl... 40 6.4
32gb|CP000001.1| Bacillus cereus E33L, complete genome 40 6.4
33gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 6.4
34dbj|AB112339.1| Drosera tokaiensis mRNA for hypothetical protein... 40 6.4
35dbj|AB112338.1| Drosera tokaiensis mRNA for hypothetical protein... 40 6.4
36gb|AC073468.9| Homo sapiens BAC clone RP11-405I21 from 7, comple... 40 6.4
37gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosom... 40 6.4
38gb|AC079921.5| Homo sapiens BAC clone RP11-360F5 from 4, complet... 40 6.4
39dbj|AP002469.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.4
40gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 6.4
41gb|AC132287.3| Mus musculus BAC clone RP24-302M13 from 8, comple... 40 6.4
42gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 6.4
43dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 6.4 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/239 (84%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                           
Query: 237     ctcagtgcaaaaccaatggagaatcaggctccgagccgctaatggaggcgaaggatgaca 296
               |||||||||||||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 7248416 ctcagtgcaaaaccaaaggagaatcaggttctgagccgctgatggaggcaaaggatgaca 7248475

                                                                           
Query: 297     tgctatcatccttggaagccatcgagaagttgagtggcgccaccgacatcctcctgttct 356
               | ||||| ||||| ||| || | |||||||| ||||| ||  | | || |||||||||||
Sbjct: 7248476 tactatcctccttcgaaaccgttgagaagttcagtggtgcagcagccagcctcctgttct 7248535

                                                                           
Query: 357     ccttgaagtaattgttgtaccgtccagagtactgagcgtggtgtcaaaagctcaggggtg 416
               | ||||||||||| |||||||||||||| || ||||||||| || | ||||||||| |||
Sbjct: 7248536 ctttgaagtaattattgtaccgtccagaata-tgagcgtggagttagaagctcaggagtg 7248594

                                                                          
Query: 417     gcactgcctgccgacactcggcggngcatcggagtcatgaaaccagacccattcccatt 475
               ||||||||||| || ||||  ||| ||| ||| |||||||| ||||  ||||| |||||
Sbjct: 7248595 gcactgcctgcagaaactctacggggcaccggggtcatgaacccagctccatttccatt 7248653



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                        
Query: 96      taggtcatgtatctacaggcaa-tcttatctaaatcctgtc 135
               |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 7248176 taggtcatatatctacaggcaaatcttatctaaatcctgtc 7248216
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/239 (84%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                           
Query: 237     ctcagtgcaaaaccaatggagaatcaggctccgagccgctaatggaggcgaaggatgaca 296
               |||||||||||||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 7246311 ctcagtgcaaaaccaaaggagaatcaggttctgagccgctgatggaggcaaaggatgaca 7246370

                                                                           
Query: 297     tgctatcatccttggaagccatcgagaagttgagtggcgccaccgacatcctcctgttct 356
               | ||||| ||||| ||| || | |||||||| ||||| ||  | | || |||||||||||
Sbjct: 7246371 tactatcctccttcgaaaccgttgagaagttcagtggtgcagcagccagcctcctgttct 7246430

                                                                           
Query: 357     ccttgaagtaattgttgtaccgtccagagtactgagcgtggtgtcaaaagctcaggggtg 416
               | ||||||||||| |||||||||||||| || ||||||||| || | ||||||||| |||
Sbjct: 7246431 ctttgaagtaattattgtaccgtccagaata-tgagcgtggagttagaagctcaggagtg 7246489

                                                                          
Query: 417     gcactgcctgccgacactcggcggngcatcggagtcatgaaaccagacccattcccatt 475
               ||||||||||| || ||||  ||| ||| ||| |||||||| ||||  ||||| |||||
Sbjct: 7246490 gcactgcctgcagaaactctacggggcaccggggtcatgaacccagctccatttccatt 7246548



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                        
Query: 96      taggtcatgtatctacaggcaa-tcttatctaaatcctgtc 135
               |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 7246071 taggtcatatatctacaggcaaatcttatctaaatcctgtc 7246111
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>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05,
             complete sequence
          Length = 99133

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/239 (84%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                         
Query: 237   ctcagtgcaaaaccaatggagaatcaggctccgagccgctaatggaggcgaaggatgaca 296
             |||||||||||||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 75169 ctcagtgcaaaaccaaaggagaatcaggttctgagccgctgatggaggcaaaggatgaca 75228

                                                                         
Query: 297   tgctatcatccttggaagccatcgagaagttgagtggcgccaccgacatcctcctgttct 356
             | ||||| ||||| ||| || | |||||||| ||||| ||  | | || |||||||||||
Sbjct: 75229 tactatcctccttcgaaaccgttgagaagttcagtggtgcagcagccagcctcctgttct 75288

                                                                         
Query: 357   ccttgaagtaattgttgtaccgtccagagtactgagcgtggtgtcaaaagctcaggggtg 416
             | ||||||||||| |||||||||||||| || ||||||||| || | ||||||||| |||
Sbjct: 75289 ctttgaagtaattattgtaccgtccagaata-tgagcgtggagttagaagctcaggagtg 75347

                                                                        
Query: 417   gcactgcctgccgacactcggcggngcatcggagtcatgaaaccagacccattcccatt 475
             ||||||||||| || ||||  ||| ||| ||| |||||||| ||||  ||||| |||||
Sbjct: 75348 gcactgcctgcagaaactctacggggcaccggggtcatgaacccagctccatttccatt 75406



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                      
Query: 96    taggtcatgtatctacaggcaa-tcttatctaaatcctgtc 135
             |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 74929 taggtcatatatctacaggcaaatcttatctaaatcctgtc 74969
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>dbj|AK067660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116C06, full
            insert sequence
          Length = 3638

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/239 (84%), Gaps = 1/239 (0%)
 Strand = Plus / Minus

                                                                        
Query: 237  ctcagtgcaaaaccaatggagaatcaggctccgagccgctaatggaggcgaaggatgaca 296
            |||||||||||||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 2126 ctcagtgcaaaaccaaaggagaatcaggttctgagccgctgatggaggcaaaggatgaca 2067

                                                                        
Query: 297  tgctatcatccttggaagccatcgagaagttgagtggcgccaccgacatcctcctgttct 356
            | ||||| ||||| ||| || | |||||||| ||||| ||  | | || |||||||||||
Sbjct: 2066 tactatcctccttcgaaaccgttgagaagttcagtggtgcagcagccagcctcctgttct 2007

                                                                        
Query: 357  ccttgaagtaattgttgtaccgtccagagtactgagcgtggtgtcaaaagctcaggggtg 416
            | ||||||||||| |||||||||||||| || ||||||||| || | ||||||||| |||
Sbjct: 2006 ctttgaagtaattattgtaccgtccagaata-tgagcgtggagttagaagctcaggagtg 1948

                                                                       
Query: 417  gcactgcctgccgacactcggcggngcatcggagtcatgaaaccagacccattcccatt 475
            ||||||||||| || ||||  ||| ||| ||| |||||||| ||||  ||||| |||||
Sbjct: 1947 gcactgcctgcagaaactctacggggcaccggggtcatgaacccagctccatttccatt 1889



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 96   taggtcatgtatctacaggcaa-tcttatctaaatcctgtc 135
            |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 2366 taggtcatatatctacaggcaaatcttatctaaatcctgtc 2326
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>dbj|AK065181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D18, full
            insert sequence
          Length = 2554

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/239 (84%), Gaps = 1/239 (0%)
 Strand = Plus / Minus

                                                                        
Query: 237  ctcagtgcaaaaccaatggagaatcaggctccgagccgctaatggaggcgaaggatgaca 296
            |||||||||||||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 2125 ctcagtgcaaaaccaaaggagaatcaggttctgagccgctgatggaggcaaaggatgaca 2066

                                                                        
Query: 297  tgctatcatccttggaagccatcgagaagttgagtggcgccaccgacatcctcctgttct 356
            | ||||| ||||| ||| || | |||||||| ||||| ||  | | || |||||||||||
Sbjct: 2065 tactatcctccttcgaaaccgttgagaagttcagtggtgcagcagccagcctcctgttct 2006

                                                                        
Query: 357  ccttgaagtaattgttgtaccgtccagagtactgagcgtggtgtcaaaagctcaggggtg 416
            | ||||||||||| |||||||||||||| || ||||||||| || | ||||||||| |||
Sbjct: 2005 ctttgaagtaattattgtaccgtccagaata-tgagcgtggagttagaagctcaggagtg 1947

                                                                       
Query: 417  gcactgcctgccgacactcggcggngcatcggagtcatgaaaccagacccattcccatt 475
            ||||||||||| || ||||  ||| ||| ||| |||||||| ||||  ||||| |||||
Sbjct: 1946 gcactgcctgcagaaactctacggggcaccggggtcatgaacccagctccatttccatt 1888



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 96   taggtcatgtatctacaggcaa-tcttatctaaatcctgtc 135
            |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 2365 taggtcatatatctacaggcaaatcttatctaaatcctgtc 2325
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>dbj|AK064951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P23, full
            insert sequence
          Length = 3153

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/239 (84%), Gaps = 1/239 (0%)
 Strand = Plus / Minus

                                                                        
Query: 237  ctcagtgcaaaaccaatggagaatcaggctccgagccgctaatggaggcgaaggatgaca 296
            |||||||||||||||| ||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 2128 ctcagtgcaaaaccaaaggagaatcaggttctgagccgctgatggaggcaaaggatgaca 2069

                                                                        
Query: 297  tgctatcatccttggaagccatcgagaagttgagtggcgccaccgacatcctcctgttct 356
            | ||||| ||||| ||| || | |||||||| ||||| ||  | | || |||||||||||
Sbjct: 2068 tactatcctccttcgaaaccgttgagaagttcagtggtgcagcagccagcctcctgttct 2009

                                                                        
Query: 357  ccttgaagtaattgttgtaccgtccagagtactgagcgtggtgtcaaaagctcaggggtg 416
            | ||||||||||| |||||||||||||| || ||||||||| || | ||||||||| |||
Sbjct: 2008 ctttgaagtaattattgtaccgtccagaata-tgagcgtggagttagaagctcaggagtg 1950

                                                                       
Query: 417  gcactgcctgccgacactcggcggngcatcggagtcatgaaaccagacccattcccatt 475
            ||||||||||| || ||||  ||| ||| ||| |||||||| ||||  ||||| |||||
Sbjct: 1949 gcactgcctgcagaaactctacggggcaccggggtcatgaacccagctccatttccatt 1891



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 96   taggtcatgtatctacaggcaa-tcttatctaaatcctgtc 135
            |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 2368 taggtcatatatctacaggcaaatcttatctaaatcctgtc 2328
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>ref|XM_470643.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1824

 Score =  172 bits (87), Expect = 7e-40
 Identities = 201/238 (84%), Gaps = 1/238 (0%)
 Strand = Plus / Minus

                                                                        
Query: 238  tcagtgcaaaaccaatggagaatcaggctccgagccgctaatggaggcgaaggatgacat 297
            ||||||||||||||| ||||||||||| || |||||||| |||||||| |||||||||||
Sbjct: 1824 tcagtgcaaaaccaaaggagaatcaggttctgagccgctgatggaggcaaaggatgacat 1765

                                                                        
Query: 298  gctatcatccttggaagccatcgagaagttgagtggcgccaccgacatcctcctgttctc 357
             ||||| ||||| ||| || | |||||||| ||||| ||  | | || ||||||||||||
Sbjct: 1764 actatcctccttcgaaaccgttgagaagttcagtggtgcagcagccagcctcctgttctc 1705

                                                                        
Query: 358  cttgaagtaattgttgtaccgtccagagtactgagcgtggtgtcaaaagctcaggggtgg 417
             ||||||||||| |||||||||||||| || ||||||||| || | ||||||||| ||||
Sbjct: 1704 tttgaagtaattattgtaccgtccagaata-tgagcgtggagttagaagctcaggagtgg 1646

                                                                      
Query: 418  cactgcctgccgacactcggcggngcatcggagtcatgaaaccagacccattcccatt 475
            |||||||||| || ||||  ||| ||| ||| |||||||| ||||  ||||| |||||
Sbjct: 1645 cactgcctgcagaaactctacggggcaccggggtcatgaacccagctccatttccatt 1588
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 332     ggcgccaccgacatcctcctgttc 355
               ||||||||||||||||||||||||
Sbjct: 1476787 ggcgccaccgacatcctcctgttc 1476764
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>gb|AC134831.3| Mus musculus BAC clone RP24-500P4 from chromosome 18, complete sequence
          Length = 188380

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 406   gctcaggggtggcactgcctg 426
             |||||||||||||||||||||
Sbjct: 14631 gctcaggggtggcactgcctg 14611
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>gb|AC161249.2| Mus musculus BAC clone RP24-541G2 from chromosome 13, complete sequence
          Length = 162934

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 5      acaagnacaaatacattgacacctttct 32
              ||||| ||||| ||||||||||||||||
Sbjct: 112064 acaagaacaaagacattgacacctttct 112037
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>ref|XM_744651.1| Aspergillus fumigatus Af293 disulfide isomerase (Afu2g06150)
           partial mRNA
          Length = 1554

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 226 aagtcctcttcctcagtgcaa 246
           |||||||||||||||||||||
Sbjct: 275 aagtcctcttcctcagtgcaa 255
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>gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, complete sequence
          Length = 190293

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 406    gctcaggggtggcactgcctg 426
              |||||||||||||||||||||
Sbjct: 119851 gctcaggggtggcactgcctg 119831
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>dbj|AK097672.1| Homo sapiens cDNA FLJ40353 fis, clone TESTI2033520, weakly similar
           to BILIARY GLYCOPROTEIN 1 PRECURSOR
          Length = 1721

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 139 tctttgtcacacatcagcatt 159
           |||||||||||||||||||||
Sbjct: 356 tctttgtcacacatcagcatt 336
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>ref|XM_940925.1| PREDICTED: Homo sapiens hypothetical protein LOC284344 (LOC284344),
           mRNA
          Length = 1715

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 139 tctttgtcacacatcagcatt 159
           |||||||||||||||||||||
Sbjct: 350 tctttgtcacacatcagcatt 330
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>gb|AF363787.2|AF363787 Aspergillus fumigatus protein disulfide isomerase family member
           mRNA, complete cds
          Length = 1337

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 226 aagtcctcttcctcagtgcaa 246
           |||||||||||||||||||||
Sbjct: 407 aagtcctcttcctcagtgcaa 387
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>dbj|AK034074.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330154F19 product:unclassifiable, full
            insert sequence
          Length = 1588

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 5    acaagnacaaatacattgacacctttct 32
            ||||| ||||| ||||||||||||||||
Sbjct: 1405 acaagaacaaagacattgacacctttct 1378
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>emb|AL928584.23| Mouse DNA sequence from clone RP23-251I16 on chromosome 4, complete
             sequence
          Length = 118310

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 405   agctcaggggtggcactgcct 425
             |||||||||||||||||||||
Sbjct: 23398 agctcaggggtggcactgcct 23378
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>gb|AC154386.2| Mus musculus BAC clone RP23-27A13 from 13, complete sequence
          Length = 170110

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 74    ttacaacaccaccacaaagtgctag 98
             |||||||||||||| ||||||||||
Sbjct: 50516 ttacaacaccaccataaagtgctag 50492
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>gb|AC154511.2| Mus musculus BAC clone RP24-69N19 from 13, complete sequence
          Length = 197061

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 5      acaagnacaaatacattgacacctttct 32
              ||||| ||||| ||||||||||||||||
Sbjct: 195789 acaagaacaaagacattgacacctttct 195816
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>emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chromosome 13, complete
             sequence
          Length = 176581

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 74    ttacaacaccaccacaaagtgctag 98
             |||||||||||||| ||||||||||
Sbjct: 62788 ttacaacaccaccataaagtgctag 62812
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 175     acaactgtccaatcttgctg 194
               ||||||||||||||||||||
Sbjct: 1353432 acaactgtccaatcttgctg 1353413
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>gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, complete sequence
          Length = 184327

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   cacacatcagcattgtcaat 165
             ||||||||||||||||||||
Sbjct: 47737 cacacatcagcattgtcaat 47756
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>gb|AC146030.3| Pan troglodytes BAC clone RP43-124E21 from chromosome 7, complete
             sequence
          Length = 169275

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   tgtatctacaggcaatctta 122
             ||||||||||||||||||||
Sbjct: 74729 tgtatctacaggcaatctta 74748
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 175     acaactgtccaatcttgctg 194
               ||||||||||||||||||||
Sbjct: 1331521 acaactgtccaatcttgctg 1331502
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>gb|AE006089.1| Pasteurella multocida subsp. multocida str. Pm70 section 56 of 204 of
            the complete genome
          Length = 12519

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 182  tccaatcttgctggtagccttcac 205
            |||||||||| |||||||||||||
Sbjct: 7926 tccaatcttggtggtagccttcac 7903
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 175     acaactgtccaatcttgctg 194
               ||||||||||||||||||||
Sbjct: 1331467 acaactgtccaatcttgctg 1331448
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>gb|AC102420.10| Mus musculus chromosome 8, clone RP24-553O21, complete sequence
          Length = 178616

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   gctcaggggtggcactgcct 425
             ||||||||||||||||||||
Sbjct: 32544 gctcaggggtggcactgcct 32525
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>gb|AC166570.2| Mus musculus chromosome 18, clone RP24-74O22, complete sequence
          Length = 163755

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   cacacatcagcattgtcaat 165
             ||||||||||||||||||||
Sbjct: 16745 cacacatcagcattgtcaat 16726
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>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete sequence
          Length = 206967

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    caagaaagtcctcttcctca 240
              ||||||||||||||||||||
Sbjct: 139443 caagaaagtcctcttcctca 139424
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>gb|AC123053.4| Mus musculus BAC clone RP24-374O20 from chromosome 7, complete sequence
          Length = 184618

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   tcttatctaaatcctgtcca 137
             ||||||||||||||||||||
Sbjct: 63379 tcttatctaaatcctgtcca 63360
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>gb|AC127316.3| Mus musculus BAC clone RP23-222G16 from 13, complete sequence
          Length = 203032

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 154    agcattgtcaatagctaacacaca 177
              ||||||||||| ||||||||||||
Sbjct: 185487 agcattgtcaacagctaacacaca 185464
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 175     acaactgtccaatcttgctg 194
               ||||||||||||||||||||
Sbjct: 1366130 acaactgtccaatcttgctg 1366111
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     taattgttgtaccgtccaga 384
               ||||||||||||||||||||
Sbjct: 2038770 taattgttgtaccgtccaga 2038751
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>dbj|AB112339.1| Drosera tokaiensis mRNA for hypothetical protein, partial cds,
           clone: DtatpG-2
          Length = 549

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 ttcaccgcaaccctcaccgc 220
           ||||||||||||||||||||
Sbjct: 267 ttcaccgcaaccctcaccgc 286
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>dbj|AB112338.1| Drosera tokaiensis mRNA for hypothetical protein, partial cds,
           clone: DtatpG-1
          Length = 524

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 ttcaccgcaaccctcaccgc 220
           ||||||||||||||||||||
Sbjct: 242 ttcaccgcaaccctcaccgc 261
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>gb|AC073468.9| Homo sapiens BAC clone RP11-405I21 from 7, complete sequence
          Length = 138435

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   tgtatctacaggcaatctta 122
             ||||||||||||||||||||
Sbjct: 17795 tgtatctacaggcaatctta 17814
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>gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosome 13, complete sequence
          Length = 193594

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    agcattgtcaatagctaacacaca 177
              ||||||||||| ||||||||||||
Sbjct: 177462 agcattgtcaacagctaacacaca 177485
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>gb|AC079921.5| Homo sapiens BAC clone RP11-360F5 from 4, complete sequence
          Length = 189796

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   atagctaacacacaactgtc 183
             ||||||||||||||||||||
Sbjct: 36652 atagctaacacacaactgtc 36671
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>dbj|AP002469.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-266E8, complete
             sequence
          Length = 158977

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    tgacacctttctcatgttcc 40
             ||||||||||||||||||||
Sbjct: 67626 tgacacctttctcatgttcc 67607
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 175     acaactgtccaatcttgctg 194
               ||||||||||||||||||||
Sbjct: 1331398 acaactgtccaatcttgctg 1331379
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>gb|AC132287.3| Mus musculus BAC clone RP24-302M13 from 8, complete sequence
          Length = 195405

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   agctcaggggtggcactgcc 424
             ||||||||||||||||||||
Sbjct: 54886 agctcaggggtggcactgcc 54905
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 267     ccgagccgctaatggaggcgaagg 290
               |||||||| |||||||||||||||
Sbjct: 4557067 ccgagccgataatggaggcgaagg 4557044
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 267     ccgagccgctaatggaggcgaagg 290
               |||||||| |||||||||||||||
Sbjct: 4489838 ccgagccgataatggaggcgaagg 4489815


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,769,647
Number of Sequences: 3902068
Number of extensions: 3769647
Number of successful extensions: 72371
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72075
Number of HSP's gapped (non-prelim): 276
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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