>PAPOG_HUMAN (Q9BWT3) Poly(A) polymerase gamma (EC 2.7.7.19) (PAP gamma)|
           (Polynucleotide adenylyltransferase gamma) (SRP RNA 3'
           adenylating enzyme)
          Length = 736

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 194 TQRKKRMPGSFLPRSSKYIXTNNI 265
           T RKKR+P   LP SS  +  NNI
Sbjct: 700 TSRKKRLPSKELPDSSSPVPANNI 723

>PRP2_YEAST (P20095) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2|
           (EC 3.6.1.-)
          Length = 876

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +2

Query: 128 QTMNRGRGGLSVQWHP-DVAFPRTQRKKRMPGSFLPRSSKYIXTNNI*LLNTQKTKTVLV 304
           QTM R  GGL+V  HP  + F   + K + P       SKY+    + L + +  +  LV
Sbjct: 796 QTMGRSSGGLNVSVHPTSILFVNHKEKAQRP-------SKYVLYQQLMLTSKEFIRDCLV 848


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,696,708
Number of Sequences: 219361
Number of extensions: 736802
Number of successful extensions: 1581
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1581
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)