>MCH1_YARLI (Q6CGU8) Probable transporter MCH1|
          Length = 486

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 31/106 (29%), Positives = 47/106 (44%)
 Frame = -2

Query: 589 TALIGLSSGFIFAAAVSVTSELFGPNSIGVNHNILITNIPLGSLLYGQIAALVYDANGLK 410
           T + G S G  F    ++ ++++G  ++G      I  + +GSL YG + A VYDA    
Sbjct: 379 TIVNGFSYGSSFTLVPTIVTKVWGIANLGTIWGSFILALAVGSLGYGLLFAKVYDA---- 434

Query: 409 STVLDKLTGTVDTMIVCMGAKCYSNTFFVWGCITLLGLASSIALFL 272
                   G      VC G  CY  TF + G  T L  A++   F+
Sbjct: 435 ----ASEVGVGSMSQVCSGVHCYGLTFVITG--TGLAFAAAAVFFI 474

>MCH1_NEUCR (Q9P3K8) Probable transporter MCH1|
          Length = 598

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 23/105 (21%), Positives = 49/105 (46%)
 Frame = -2

Query: 589 TALIGLSSGFIFAAAVSVTSELFGPNSIGVNHNILITNIPLGSLLYGQIAALVYDANGLK 410
           + L+G   G +F+    + + ++G  +   N  I+     LG+  +G + + VY + G++
Sbjct: 484 SGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVAMFPALGATFWGLVYSAVYQS-GVE 542

Query: 409 STVLDKLTGTVDTMIVCMGAKCYSNTFFVWGCITLLGLASSIALF 275
               +   G  D    C G++CY++ F  W     + +A  + L+
Sbjct: 543 KAASNGQGGEEDQF--CYGSECYASAF--WAMAASVWVACGLVLW 583

>Y38K_THETE (P05715) Hypothetical 38 kDa protein in 23S RNA operon|
          Length = 373

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 20/79 (25%), Positives = 36/79 (45%)
 Frame = -2

Query: 598 IAGTALIGLSSGFIFAAAVSVTSELFGPNSIGVNHNILITNIPLGSLLYGQIAALVYDAN 419
           I G   +GL+ G I    ++++S +FGP     N+ +L T   +G  L       VY   
Sbjct: 278 IVGVIAVGLTGGAIIILYLNLSSRIFGPKYATANNGLLYTAKAVGGTLGSAAFGYVYALG 337

Query: 418 GLKSTVLDKLTGTVDTMIV 362
           G ++++L      +  M +
Sbjct: 338 GARASLLFAAASALAAMAI 356

>MCH1_EMENI (Q5AXV1) Probable transporter mch1|
          Length = 615

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
 Frame = -2

Query: 589 TALIGLSSGFIFAAAVSVTSELFGPNSIGVNHNILITNIPLGSLLYGQIAALVYDANGLK 410
           TAL+GL  G IF+    + S ++G  + G N  I+      G+ ++G I +  Y +    
Sbjct: 510 TALVGLGYGSIFSLVPIIISVVWGVENFGTNWGIVAMFPAAGAAMWGVIYSRAYQSAADG 569

Query: 409 STVLDKLTGTVDTMIVCMGAKCY-----SNTFFVWGCI 311
           S   D           C G KC+       TF VW  I
Sbjct: 570 SPTDDG---------QCHGWKCFGFWSIGCTFSVWVAI 598

>MCH1_ASPFU (Q4WVT3) Probable transporter mch1|
          Length = 619

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 27/92 (29%), Positives = 40/92 (43%)
 Frame = -2

Query: 589 TALIGLSSGFIFAAAVSVTSELFGPNSIGVNHNILITNIPLGSLLYGQIAALVYDANGLK 410
           TALIGL  G  F+    + S ++G  + G N  I+      G+ ++G I +  Y      
Sbjct: 513 TALIGLGYGSAFSLVPIIISVVWGVENFGTNWGIVAMVPAAGAAMWGVIYSRGY------ 566

Query: 409 STVLDKLTGTVDTMIVCMGAKCYSNTFFVWGC 314
               D   G+ D    C G +CY   F+  GC
Sbjct: 567 QDATDGGNGSPDGQ--CHGWRCYG--FWAVGC 594

>MCH1_ASHGO (Q752I1) Probable transporter MCH1|
          Length = 450

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = -2

Query: 589 TALIGLSSGFIFAAAVSVTSELFGPNSIGVNHNILITNIPLGSLLYGQIAALVYDANGLK 410
           +AL G   G +F  +  +T  ++G    G  +   +    +GS+L+G   A ++DAN   
Sbjct: 353 SALSGACYGGLFTVSPILTLAVWGDAVFGTAYGSFMITPAVGSILFGLTYAHIFDANCTP 412

Query: 409 STVL 398
           S VL
Sbjct: 413 SGVL 416

>MCH1_HANAN (Q96TW9) Probable transporter MCH1|
          Length = 489

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2

Query: 589 TALIGLSSGFIFAAAVSVTSELFGPNSIGVNHNILITNIPLGSLLYGQIAALVYDA 422
           +AL G S G +F    +V   ++GP   G      +    +GS  +G +  LVYD+
Sbjct: 363 SALSGFSYGGLFTLYPTVIFSIWGPEIFGSAWGSFMIAPAIGSTTFGMVFGLVYDS 418

>VTXB_SYNVE (Q98993) Verrucotoxin subunit beta (VTX beta-subunit)|
          Length = 695

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = -2

Query: 493 NILITNIPLGSLLYGQIAALVYDANGLKSTVLDKLTGTVDTMI 365
           NI  T++ +G +LYG  A  V+D+N + ST + ++ G ++ +I
Sbjct: 134 NIQATHVVIG-ILYGANAFFVFDSNKVDSTNVQEIQGQMEAVI 175

>STXB_SYNHO (Q91453) Stonustoxin subunit beta (SNTX beta-subunit)|
          Length = 699

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = -2

Query: 493 NILITNIPLGSLLYGQIAALVYDANGLKSTVLDKLTGTVDTMI 365
           NI  T++ +G +LYG  A  V+D+N + ST + ++ G ++ +I
Sbjct: 134 NIQATHVVIG-ILYGANAFFVFDSNKVDSTNVQEIQGQMEAVI 175

>ATG4B_BOVIN (Q6PZ03) Cysteine protease ATG4B (EC 3.4.22.-) (Autophagy-related|
           protein 4 homolog B) (Autophagy-related cysteine
           endopeptidase 2B) (Autophagin-2B) (bAut2B)
          Length = 393

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 394 CPVPYSSIHLHHIPGRQSV 450
           CPVP  S H  H PGR S+
Sbjct: 292 CPVPDESFHCQHPPGRMSI 310

>YHJX_ECOLI (P37662) Inner membrane protein yhjX|
          Length = 402

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -2

Query: 595 AGTALIGLSSGFIFAAAVSVTSELFGPNSIGVNHNILITNIPLGSLLYGQIAAL 434
           A  A +  + G       S+ SE FG N++  N+ ++     +GS+    IA+L
Sbjct: 309 AAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIASL 362

>LIFR_RAT (O70535) Leukemia inhibitory factor receptor precursor (LIF|
           receptor) (LIF-R) (CD118 antigen)
          Length = 1093

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 271 SRIGLCLMPSPAM*CNPTQRMCLSSTSHPCTLSW 372
           +RI L    +P M C+   + C SS S PC L W
Sbjct: 637 NRIFLSWQHNPNMTCDYVIKWCNSSWSEPCLLDW 670

>LIFR_MOUSE (P42703) Leukemia inhibitory factor receptor precursor (LIF|
           receptor) (LIF-R) (D-factor/LIF receptor) (CD118
           antigen)
          Length = 1092

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 265 LFSRIGLCLMPSPAM*CNPTQRMCLSSTSHPCTLSW 372
           L +RI L     P M C+   + C SS S PC L W
Sbjct: 634 LGNRIFLTWRHDPNMTCDYVIKWCNSSRSEPCLLDW 669


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,780,052
Number of Sequences: 219361
Number of extensions: 1599523
Number of successful extensions: 4016
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4015
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)