ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal25e19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CR356245.25| Zebrafish DNA sequence from clone CH211-257I15 ... 42 1.9
2gb|AC121982.3| Mus musculus BAC clone RP24-291D6 from chromosome... 42 1.9
3emb|BX296544.8| Zebrafish DNA sequence from clone DKEYP-14B8 in ... 42 1.9
4emb|BX470182.12| Zebrafish DNA sequence from clone CH211-195P4 i... 42 1.9
5emb|AL929077.19| Zebrafish DNA sequence from clone CH211-129K19 ... 42 1.9
6gb|AC093789.3| Homo sapiens BAC clone RP11-219G10 from 4, comple... 42 1.9
7gb|AC016736.6| Homo sapiens BAC clone RP11-393J17 from 2, comple... 42 1.9
8emb|AL844187.13| Zebrafish DNA sequence from clone DKEY-221D18 i... 42 1.9
9gb|AC144774.3| Mus musculus BAC clone RP24-128I18 from 6, comple... 42 1.9
10gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, com... 40 7.6
11ref|XM_466114.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.6
12gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 7.6
13gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome... 40 7.6
14ref|XM_953472.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.6
15gb|AC110102.6| Rattus norvegicus 4 BAC CH230-209C7 (Children's H... 40 7.6
16ref|XM_331452.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.6
17gb|AC087102.3| Rattus norvegicus strain Brown Norway clone RP31-... 40 7.6
18gb|AC139571.2| Mus musculus BAC clone RP24-73K9 from chromosome ... 40 7.6
19gb|AC046160.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.6
20ref|XM_533356.2| PREDICTED: Canis familiaris similar to Nebulin ... 40 7.6
21emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on ch... 40 7.6
22gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome... 40 7.6
23gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome... 40 7.6
24gb|AY246778.1| Equus caballus subtracted library fragment 14 40 7.6
25emb|AL451141.13| Human DNA sequence from clone RP11-265E5 on chr... 40 7.6
26gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.6
27gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's H... 40 7.6
28emb|AL596096.7| Mouse DNA sequence from clone RP23-42P20 on chro... 40 7.6
29emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 7.6
30gb|AC121515.3| Rattus norvegicus strain Brown Norway clone RP31-... 40 7.6
31gb|AC091938.2| Homo sapiens chromosome 5 clone RP11-329N11, comp... 40 7.6
32dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.6
33gb|AC008972.8| Homo sapiens chromosome 5 clone CTD-2376I4, compl... 40 7.6
34gb|AC154332.2| Mus musculus BAC clone RP23-259P17 from chromosom... 40 7.6
35gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome... 40 7.6
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
37gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 40 7.6
38gb|AC012119.8| Homo sapiens chromosome 8, clone RP11-175E9, comp... 40 7.6
39dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
40gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, co... 40 7.6
41gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, com... 40 7.6
42gb|AC161242.2| Mus musculus BAC clone RP24-200E4 from chromosome... 40 7.6
43gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, comple... 40 7.6
44emb|CR936841.11| Mouse DNA sequence from clone DN-491F10 on chro... 40 7.6
45emb|AL671989.4| B.floridae DNA sequence from clone XX-BF17P53, c... 40 7.6

>emb|CR356245.25| Zebrafish DNA sequence from clone CH211-257I15 in linkage group 8,
             complete sequence
          Length = 153042

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    aaggaacaaattacaaatact 113
             |||||||||||||||||||||
Sbjct: 59942 aaggaacaaattacaaatact 59922



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>gb|AC121982.3| Mus musculus BAC clone RP24-291D6 from chromosome 6, complete sequence
          Length = 167409

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    agtaaacaagcaagcaagcat 213
              |||||||||||||||||||||
Sbjct: 125049 agtaaacaagcaagcaagcat 125029



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>emb|BX296544.8| Zebrafish DNA sequence from clone DKEYP-14B8 in linkage group 21,
             complete sequence
          Length = 168838

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    aaggaacaaattacaaatact 113
             |||||||||||||||||||||
Sbjct: 26715 aaggaacaaattacaaatact 26695



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>emb|BX470182.12| Zebrafish DNA sequence from clone CH211-195P4 in linkage group 16,
             complete sequence
          Length = 199742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    aaggaacaaattacaaatact 113
             |||||||||||||||||||||
Sbjct: 32773 aaggaacaaattacaaatact 32793



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>emb|AL929077.19| Zebrafish DNA sequence from clone CH211-129K19 in linkage group 15,
              complete sequence
          Length = 167866

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 93     aaggaacaaattacaaatact 113
              |||||||||||||||||||||
Sbjct: 116623 aaggaacaaattacaaatact 116603



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>gb|AC093789.3| Homo sapiens BAC clone RP11-219G10 from 4, complete sequence
          Length = 202937

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 199    caagcaagcaagcatactgtt 219
              |||||||||||||||||||||
Sbjct: 112000 caagcaagcaagcatactgtt 112020



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>gb|AC016736.6| Homo sapiens BAC clone RP11-393J17 from 2, complete sequence
          Length = 149884

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 101   aattacaaatactaccttaattagc 125
             |||||||||||||||||| ||||||
Sbjct: 39551 aattacaaatactacctttattagc 39575



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>emb|AL844187.13| Zebrafish DNA sequence from clone DKEY-221D18 in linkage group 16,
              complete sequence
          Length = 168637

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 93     aaggaacaaattacaaatact 113
              |||||||||||||||||||||
Sbjct: 102757 aaggaacaaattacaaatact 102737



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>gb|AC144774.3| Mus musculus BAC clone RP24-128I18 from 6, complete sequence
          Length = 143838

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 193   agtaaacaagcaagcaagcat 213
             |||||||||||||||||||||
Sbjct: 14387 agtaaacaagcaagcaagcat 14367



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>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence
          Length = 167652

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    aaacaagcaagcaagcatac 215
              ||||||||||||||||||||
Sbjct: 167418 aaacaagcaagcaagcatac 167399



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>ref|XM_466114.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 540

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 527 gcggcggcggcatgaggctc 546
           ||||||||||||||||||||
Sbjct: 37  gcggcggcggcatgaggctc 18



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 524     tgagcggcggcggcatgagg 543
               ||||||||||||||||||||
Sbjct: 3340966 tgagcggcggcggcatgagg 3340947



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>gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome 18, complete sequence
          Length = 158788

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   catgaggctctgtggctagc 556
             ||||||||||||||||||||
Sbjct: 67828 catgaggctctgtggctagc 67847



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>ref|XM_953472.1| Neurospora crassa OR74A hypothetical protein (NCU09061.1) partial
           mRNA
          Length = 711

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 430 catcatggccgcctcctcag 449
           ||||||||||||||||||||
Sbjct: 483 catcatggccgcctcctcag 464



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>gb|AC110102.6| Rattus norvegicus 4 BAC CH230-209C7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 219273

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   agtaaacaagcaagcaagca 212
             ||||||||||||||||||||
Sbjct: 92223 agtaaacaagcaagcaagca 92242



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>ref|XM_331452.1| Neurospora crassa OR74A hypothetical protein (NCU09061.1) partial
           mRNA
          Length = 711

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 430 catcatggccgcctcctcag 449
           ||||||||||||||||||||
Sbjct: 483 catcatggccgcctcctcag 464



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>gb|AC087102.3| Rattus norvegicus strain Brown Norway clone RP31-331N5, complete sequence
          Length = 151673

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    agtaaacaagcaagcaagca 212
              ||||||||||||||||||||
Sbjct: 144689 agtaaacaagcaagcaagca 144670



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>gb|AC139571.2| Mus musculus BAC clone RP24-73K9 from chromosome 15, complete sequence
          Length = 210089

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   agtaaacaagcaagcaagca 212
             ||||||||||||||||||||
Sbjct: 34419 agtaaacaagcaagcaagca 34400



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>gb|AC046160.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-130F23, complete
              sequence
          Length = 214627

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    agtaaacaagcaagcaagca 212
              ||||||||||||||||||||
Sbjct: 131963 agtaaacaagcaagcaagca 131982



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>ref|XM_533356.2| PREDICTED: Canis familiaris similar to Nebulin (LOC476149), mRNA
          Length = 16878

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 436 ggccgcctcctcaggcctcc 455
           ||||||||||||||||||||
Sbjct: 97  ggccgcctcctcaggcctcc 116



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>emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on chromosome 13, complete
             sequence
          Length = 188616

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   aaacaagcaagcaagcatac 215
             ||||||||||||||||||||
Sbjct: 77738 aaacaagcaagcaagcatac 77757



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>gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome 1, complete sequence
          Length = 163778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   agtaaacaagcaagcaagca 212
             ||||||||||||||||||||
Sbjct: 92429 agtaaacaagcaagcaagca 92448



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>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete sequence
          Length = 211181

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   aaacaagcaagcaagcatac 215
             ||||||||||||||||||||
Sbjct: 33845 aaacaagcaagcaagcatac 33864



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>gb|AY246778.1| Equus caballus subtracted library fragment 14
          Length = 771

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 445 ctcaggcctccacgagcctg 464
           ||||||||||||||||||||
Sbjct: 368 ctcaggcctccacgagcctg 349



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>emb|AL451141.13| Human DNA sequence from clone RP11-265E5 on chromosome 6, complete
             sequence
          Length = 63966

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 438   ccgcctcctcaggcctccac 457
             ||||||||||||||||||||
Sbjct: 32438 ccgcctcctcaggcctccac 32457



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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    gcaggcctgcatggtccact 328
              ||||||||||||||||||||
Sbjct: 695791 gcaggcctgcatggtccact 695810



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>gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 238669

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   agtaaacaagcaagcaagca 212
             ||||||||||||||||||||
Sbjct: 78856 agtaaacaagcaagcaagca 78875



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>emb|AL596096.7| Mouse DNA sequence from clone RP23-42P20 on chromosome 11 Contains the 5'
              end of the Alox12e gene for epidermal arachidonate
              lipoxygenase, the gene for arachidonate 15-lipoxygenase, a
              novel pseudogene, two genes for novel proteins
              (4930563C04Rik, 1110030J09Rik), a Mitochondrial 28S
              ribosomal protein pseudogene, a NADH dehydrogenase
              (ubiquinone) 1 beta subcomplex 8 (Ndufb8) pseudogene, the
              gene for a novel protein similar to Beta-arrestin 2
              (Arrestin, beta 2) (LOC216869), the Cxcl16 gene for
              chemokine (C-X-C motif) ligand 16, the gene for a novel
              protein similar to human zinc finger MYND domain containg
              15 (ZMYND15), the 5' end of the gene for a novel protein
              (2010003F10Rik) and three CpG islands, complete sequence
          Length = 193277

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    tagtaaacaagcaagcaagc 211
              ||||||||||||||||||||
Sbjct: 104199 tagtaaacaagcaagcaagc 104218



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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 410    ggcatcggcggctgcgcgcc 429
              ||||||||||||||||||||
Sbjct: 180708 ggcatcggcggctgcgcgcc 180727



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>gb|AC121515.3| Rattus norvegicus strain Brown Norway clone RP31-425H6, complete
             sequence
          Length = 152757

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   agtaaacaagcaagcaagca 212
             ||||||||||||||||||||
Sbjct: 14916 agtaaacaagcaagcaagca 14897



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>gb|AC091938.2| Homo sapiens chromosome 5 clone RP11-329N11, complete sequence
          Length = 70122

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   aaacaagcaagcaagcatac 215
             ||||||||||||||||||||
Sbjct: 58081 aaacaagcaagcaagcatac 58100



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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 425     gcgcccatcatggccgcctc 444
               ||||||||||||||||||||
Sbjct: 2617717 gcgcccatcatggccgcctc 2617736



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 425     gcgcccatcatggccgcctc 444
               ||||||||||||||||||||
Sbjct: 2602795 gcgcccatcatggccgcctc 2602776



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>gb|AC008972.8| Homo sapiens chromosome 5 clone CTD-2376I4, complete sequence
          Length = 98842

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   agtaaacaagcaagcaagca 212
             ||||||||||||||||||||
Sbjct: 89478 agtaaacaagcaagcaagca 89497



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>gb|AC154332.2| Mus musculus BAC clone RP23-259P17 from chromosome 14, complete
            sequence
          Length = 208155

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 193  agtaaacaagcaagcaagca 212
            ||||||||||||||||||||
Sbjct: 8770 agtaaacaagcaagcaagca 8789



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>gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome 12, complete sequence
          Length = 189979

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    agtaaacaagcaagcaagca 212
              ||||||||||||||||||||
Sbjct: 165320 agtaaacaagcaagcaagca 165339



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 527      gcggcggcggcatgaggctc 546
                ||||||||||||||||||||
Sbjct: 20490958 gcggcggcggcatgaggctc 20490977



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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    agtaaacaagcaagcaagca 212
              ||||||||||||||||||||
Sbjct: 350937 agtaaacaagcaagcaagca 350918



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>gb|AC012119.8| Homo sapiens chromosome 8, clone RP11-175E9, complete sequence
          Length = 154898

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 493    gggttgcatcagcgacctac 512
              ||||||||||||||||||||
Sbjct: 118134 gggttgcatcagcgacctac 118153



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>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0069D13
          Length = 157088

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 527    gcggcggcggcatgaggctc 546
              ||||||||||||||||||||
Sbjct: 133382 gcggcggcggcatgaggctc 133401



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>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence
          Length = 165190

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   aaacaagcaagcaagcatac 215
             ||||||||||||||||||||
Sbjct: 76765 aaacaagcaagcaagcatac 76746



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>gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, complete sequence
          Length = 174902

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    aaacaagcaagcaagcatac 215
              ||||||||||||||||||||
Sbjct: 131196 aaacaagcaagcaagcatac 131215



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>gb|AC161242.2| Mus musculus BAC clone RP24-200E4 from chromosome 12, complete sequence
          Length = 179665

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   agtaaacaagcaagcaagca 212
             ||||||||||||||||||||
Sbjct: 83269 agtaaacaagcaagcaagca 83288



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>gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, complete sequence
          Length = 145213

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    agtaaacaagcaagcaagca 212
              ||||||||||||||||||||
Sbjct: 143103 agtaaacaagcaagcaagca 143084



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>emb|CR936841.11| Mouse DNA sequence from clone DN-491F10 on chromosome 11, complete
             sequence
          Length = 114510

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tagtaaacaagcaagcaagc 211
             ||||||||||||||||||||
Sbjct: 56032 tagtaaacaagcaagcaagc 56051



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>emb|AL671989.4| B.floridae DNA sequence from clone XX-BF17P53, complete sequence
          Length = 42326

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   agtaaacaagcaagcaagca 212
             ||||||||||||||||||||
Sbjct: 27592 agtaaacaagcaagcaagca 27611


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,170,295
Number of Sequences: 3902068
Number of extensions: 4170295
Number of successful extensions: 102297
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102006
Number of HSP's gapped (non-prelim): 291
length of query: 563
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 540
effective length of database: 17,143,297,704
effective search space: 9257380760160
effective search space used: 9257380760160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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