ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24p03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
2dbj|AK068560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
3dbj|AK073906.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 9e-40
4gb|BT018465.1| Zea mays clone EL01N0417D07.d mRNA sequence 165 2e-37
5dbj|AK099692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
7dbj|AP004012.3| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
8dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
9dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
10gb|AC144724.9| Medicago truncatula clone mth2-7g10, complete seq... 80 1e-11
11dbj|AB236808.1| Trifolium pratense RNA for hypothetical protein,... 78 4e-11
12dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone... 60 9e-06
13ref|XM_721814.1| Plasmodium yoelii yoelii str. 17XNL dimethylade... 44 0.53
14ref|XM_670343.1| Plasmodium berghei strain ANKA dimethyladenosin... 44 0.53
15gb|DQ084081.1| Monarcha chrysomela NADH dehydrogenase subunit 2 ... 44 0.53
16emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 ... 42 2.1
17emb|AL954842.7| Zebrafish DNA sequence from clone DKEY-33E5 in l... 42 2.1
18gb|DQ084093.1| Monarcha leucotis NADH dehydrogenase subunit 2 (N... 42 2.1
19ref|XM_513569.1| PREDICTED: Pan troglodytes similar to 4932411G0... 40 8.2
20ref|NM_028481.1| Mus musculus coiled-coil domain containing 18 (... 40 8.2
21gb|AC159996.7| Mus musculus chromosome 5, clone RP23-46J11, comp... 40 8.2
22emb|AL355809.11| Human DNA sequence from clone RP4-650K8 on chro... 40 8.2
23emb|AL139421.12| Human DNA sequence from clone RP4-717I23 on chr... 40 8.2
24emb|Z33013.1|MC010 M.capricolum DNA for CONTIG MC010 40 8.2
25emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 40 8.2
26gb|BC082598.1| Mus musculus coiled-coil domain containing 18, mR... 40 8.2
27gb|AC009377.7| Drosophila melanogaster 3L BAC RP98-26P20 (Roswel... 40 8.2
28dbj|AK126045.1| Homo sapiens cDNA FLJ44057 fis, clone TESTI40349... 40 8.2
29gb|AC009367.9| Drosophila melanogaster 3L BAC RP98-48B15 (Roswel... 40 8.2
30gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, comp... 40 8.2
31gb|U03969.2|TGDHC1B Tripneustes gratilla dynein heavy chain isot... 40 8.2
32gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 8.2
33gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 40 8.2
34gb|AC154534.2| Mus musculus BAC clone RP23-469P20 from chromosom... 40 8.2
35dbj|AK016519.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.2
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
37gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, com... 40 8.2
38gb|AY211918.1| Homo sapiens sarcoma antigen NY-SAR-41 mRNA, part... 40 8.2
39gb|AC083874.2|AC083874 Homo sapiens chromosome 7 clone RP11-792L... 40 8.2
40ref|XM_223734.3| PREDICTED: Rattus norvegicus similar to Sarcoma... 40 8.2
41gb|AC009276.9|AC009276 Homo sapiens chromosome 7 clone RP11-239G... 40 8.2
42dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
43gb|AC035150.1|AC035150 Homo sapiens chromosome 19, BAC CIT978SKB... 40 8.2
44dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
45dbj|BS000119.1| Pan troglodytes chromosome 22 clone:RP43-001G01,... 40 8.2
46dbj|AB016891.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.2
47dbj|AB063285.1| Homo sapiens HLCS gene for holocarboxylase synth... 40 8.2
48dbj|AK130342.1| Homo sapiens cDNA FLJ26832 fis, clone PRS07128 40 8.2
49gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromoso... 40 8.2
50gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68... 40 8.2
51gb|AC006213.1|AC006213 Homo sapiens, clone hRPK.15_A_1, complete... 40 8.2
52dbj|AP001727.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.2
53gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 40 8.2
54gb|AF061106.1|AF061106 Petunia x hybrida putative monosaccharide... 40 8.2
55emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence ... 40 8.2
56ref|NM_206886.2| Homo sapiens coiled-coil domain containing 18 (... 40 8.2
57dbj|AP000704.2| Homo sapiens genomic DNA, chromosome 21q22.2, BA... 40 8.2 
>dbj|AK104282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D08, full
           insert sequence
          Length = 1497

 Score =  186 bits (94), Expect = 6e-44
 Identities = 151/170 (88%)
 Strand = Plus / Minus

                                                                       
Query: 437 atctggagcctgaaatcagtttctggtcgacggcataccttcctcagaggaacaatctcc 496
           ||||| |||||| | |||||||||||||| || |||||||||||||| |||||||| |||
Sbjct: 899 atctgaagcctgtagtcagtttctggtcggcgacataccttcctcagtggaacaatttcc 840

                                                                       
Query: 497 tcagagtgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcatgt 556
           ||||||||||||||||| || ||||||||||| || ||||| ||||||| ||||||||||
Sbjct: 839 tcagagtgatcatgatcgtagcgaacaagaaatctacagcgacaccctcgtacatcatgt 780

                                                             
Query: 557 ctgcgcctttgagcatcaagaacacgagcatcaaaatagagggcctgctc 606
           || ||||||||||||||||| |||| |||||| ||||| || ||||||||
Sbjct: 779 ctacgcctttgagcatcaaggacacaagcatcgaaatacagagcctgctc 730



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 266  gctggtaagggagcagccggcttgtcagatggccctccttgatctgggttgggaaccacg 325
            ||||| |||| |||||| |||||| | | |||| || |||| ||| |||| | ||||| |
Sbjct: 1094 gctggcaaggtagcagcaggcttgcctgttggctcttcttggtcttggttagaaaccatg 1035

                                                                    
Query: 326  gtcacctcggcagtgttcacgtccatcatcttgtgtggcttttggggtttctgctc 381
            || |||||  |||||||||| |||||||| |||||  ||||| |||||||||||||
Sbjct: 1034 gttacctcatcagtgttcacatccatcattttgtgctgctttgggggtttctgctc 979
to top
>dbj|AK068560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L16, full
            insert sequence
          Length = 3376

 Score =  186 bits (94), Expect = 6e-44
 Identities = 151/170 (88%)
 Strand = Plus / Minus

                                                                        
Query: 437  atctggagcctgaaatcagtttctggtcgacggcataccttcctcagaggaacaatctcc 496
            ||||| |||||| | |||||||||||||| || |||||||||||||| |||||||| |||
Sbjct: 2558 atctgaagcctgtagtcagtttctggtcggcgacataccttcctcagtggaacaatttcc 2499

                                                                        
Query: 497  tcagagtgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcatgt 556
            ||||||||||||||||| || ||||||||||| || ||||| ||||||| ||||||||||
Sbjct: 2498 tcagagtgatcatgatcgtagcgaacaagaaatctacagcgacaccctcgtacatcatgt 2439

                                                              
Query: 557  ctgcgcctttgagcatcaagaacacgagcatcaaaatagagggcctgctc 606
            || ||||||||||||||||| |||| |||||| ||||| || ||||||||
Sbjct: 2438 ctacgcctttgagcatcaaggacacaagcatcgaaatacagagcctgctc 2389



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 266  gctggtaagggagcagccggcttgtcagatggccctccttgatctgggttgggaaccacg 325
            ||||| |||| |||||| |||||| | | |||| || |||| ||| |||| | ||||| |
Sbjct: 2753 gctggcaaggtagcagcaggcttgcctgttggctcttcttggtcttggttagaaaccatg 2694

                                                                    
Query: 326  gtcacctcggcagtgttcacgtccatcatcttgtgtggcttttggggtttctgctc 381
            || |||||  |||||||||| |||||||| |||||  ||||| |||||||||||||
Sbjct: 2693 gttacctcatcagtgttcacatccatcattttgtgctgctttgggggtttctgctc 2638
to top
>dbj|AK073906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073M23, full
           insert sequence
          Length = 1655

 Score =  172 bits (87), Expect = 9e-40
 Identities = 138/155 (89%)
 Strand = Plus / Minus

                                                                       
Query: 452 tcagtttctggtcgacggcataccttcctcagaggaacaatctcctcagagtgatcatga 511
           |||||||||||||| || |||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 847 tcagtttctggtcggcgacataccttcctcagtggaacaatttcctcagagtgatcatga 788

                                                                       
Query: 512 tcataacgaacaagaaacctgcagcggcaccctcttacatcatgtctgcgcctttgagca 571
           || || ||||||||||| || ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 787 tcgtagcgaacaagaaatctacagcgacaccctcgtacatcatgtctacgcctttgagca 728

                                              
Query: 572 tcaagaacacgagcatcaaaatagagggcctgctc 606
           ||||| |||| || ||| ||||| || ||||||||
Sbjct: 727 tcaaggacacaagtatcgaaatacagagcctgctc 693



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 266  gctggtaagggagcagccggcttgtcagatggccctccttgatctgggttgggaaccacg 325
            ||||| |||| |||||| |||||| | | |||| || |||| ||| |||| | ||||| |
Sbjct: 1057 gctggcaaggtagcagcaggcttgcctgttggctcttcttggtcttggttagaaaccatg 998

                                                                    
Query: 326  gtcacctcggcagtgttcacgtccatcatcttgtgtggcttttggggtttctgctc 381
            || |||||  |||||||||| |||||||| |||||  ||||| |||||||||||||
Sbjct: 997  gttacctcatcagtgttcacatccatcattttgtgctgctttgggggtttctgctc 942
to top
>gb|BT018465.1| Zea mays clone EL01N0417D07.d mRNA sequence
          Length = 1359

 Score =  165 bits (83), Expect = 2e-37
 Identities = 164/191 (85%)
 Strand = Plus / Minus

                                                                       
Query: 416 gccgctctagaggcgtgcaagatctggagcctgaaatcagtttctggtcgacggcatacc 475
           ||||||||||  || ||||  ||||| |||||| | |||||||||||||| ||||| |||
Sbjct: 911 gccgctctagcagcatgcagaatctgaagcctgtagtcagtttctggtcggcggcacacc 852

                                                                       
Query: 476 ttcctcagaggaacaatctcctcagagtgatcatgatcataacgaacaagaaacctgcag 535
           |||||||| |||||||| ||||||||    ||||||||||| ||||||||||| || || 
Sbjct: 851 ttcctcagtggaacaatttcctcagaagagtcatgatcatagcgaacaagaaatctacaa 792

                                                                       
Query: 536 cggcaccctcttacatcatgtctgcgcctttgagcatcaagaacacgagcatcaaaatag 595
           ||||| ||||| |||||||| || | ||||||||||||||| ||||||||||||||||||
Sbjct: 791 cggcaacctctaacatcatgccttctcctttgagcatcaaggacacgagcatcaaaatag 732

                      
Query: 596 agggcctgctc 606
           || ||||||||
Sbjct: 731 agagcctgctc 721
to top
>dbj|AK099692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N05, full
            insert sequence
          Length = 2071

 Score =  135 bits (68), Expect = 2e-28
 Identities = 131/152 (86%)
 Strand = Plus / Minus

                                                                        
Query: 452  tcagtttctggtcgacggcataccttcctcagaggaacaatctcctcagagtgatcatga 511
            ||||||||||| ||||| || | ||||||||| |||||||| |||||||||| |||||||
Sbjct: 1741 tcagtttctggccgacgacacatcttcctcagtggaacaatttcctcagagtcatcatga 1682

                                                                        
Query: 512  tcataacgaacaagaaacctgcagcggcaccctcttacatcatgtctgcgcctttgagca 571
            ||||| | ||||||||| ||||| || || |||||| ||||||| || ||| ||||||||
Sbjct: 1681 tcatagcaaacaagaaatctgcaacgacaacctcttgcatcatgcctacgcttttgagca 1622

                                            
Query: 572  tcaagaacacgagcatcaaaatagagggcctg 603
            ||||| ||| ||||||||||||| || |||||
Sbjct: 1621 tcaaggacatgagcatcaaaatacagagcctg 1590
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  127 bits (64), Expect = 5e-26
 Identities = 100/112 (89%)
 Strand = Plus / Plus

                                                                            
Query: 495      cctcagagtgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcat 554
                ||||||||||||||||||| || ||||||||||| || ||||| ||||||| ||||||||
Sbjct: 16321404 cctcagagtgatcatgatcgtagcgaacaagaaatctacagcgacaccctcgtacatcat 16321463

                                                                    
Query: 555      gtctgcgcctttgagcatcaagaacacgagcatcaaaatagagggcctgctc 606
                |||| ||||||||||||||||| |||| |||||| ||||| || ||||||||
Sbjct: 16321464 gtctacgcctttgagcatcaaggacacaagcatcgaaatacagagcctgctc 16321515



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 94/109 (86%)
 Strand = Plus / Plus

                                                                            
Query: 495      cctcagagtgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcat 554
                ||||||||| |||||||||||| | ||||||||| ||||| || || |||||| ||||||
Sbjct: 16255075 cctcagagtcatcatgatcatagcaaacaagaaatctgcaacgacaacctcttgcatcat 16255134

                                                                 
Query: 555      gtctgcgcctttgagcatcaagaacacgagcatcaaaatagagggcctg 603
                | || ||| ||||||||||||| ||| ||||||||||||| || |||||
Sbjct: 16255135 gcctacgcttttgagcatcaaggacatgagcatcaaaatacagagcctg 16255183



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                            
Query: 437      atctggagcctgaaatcagtttctggtcgacggcataccttcctcagaggaacaatctcc 496
                ||||| |||||| | |||||||||||||| || |||||||||||||| |||||||| |||
Sbjct: 16320781 atctgaagcctgtagtcagtttctggtcggcgacataccttcctcagtggaacaatttcc 16320840

                 
Query: 497      t 497
                |
Sbjct: 16320841 t 16320841



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                            
Query: 266      gctggtaagggagcagccggcttgtcagatggccctccttgatctgggttgggaaccacg 325
                ||||| |||| |||||| |||||| | | |||| || |||| ||| |||| | ||||| |
Sbjct: 16320586 gctggcaaggtagcagcaggcttgcctgttggctcttcttggtcttggttagaaaccatg 16320645

                                                                        
Query: 326      gtcacctcggcagtgttcacgtccatcatcttgtgtggcttttggggtttctgctc 381
                || |||||  |||||||||| |||||||| |||||  ||||| |||||||||||||
Sbjct: 16320646 gttacctcatcagtgttcacatccatcattttgtgctgctttgggggtttctgctc 16320701



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 452      tcagtttctggtcgacggcataccttcctcagaggaacaatctcct 497
                ||||||||||| ||||| || | ||||||||| |||||||| ||||
Sbjct: 16253798 tcagtttctggccgacgacacatcttcctcagtggaacaatttcct 16253843
to top
>dbj|AP004012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1568_D07
          Length = 83857

 Score =  127 bits (64), Expect = 5e-26
 Identities = 100/112 (89%)
 Strand = Plus / Plus

                                                                         
Query: 495   cctcagagtgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcat 554
             ||||||||||||||||||| || ||||||||||| || ||||| ||||||| ||||||||
Sbjct: 16505 cctcagagtgatcatgatcgtagcgaacaagaaatctacagcgacaccctcgtacatcat 16564

                                                                 
Query: 555   gtctgcgcctttgagcatcaagaacacgagcatcaaaatagagggcctgctc 606
             |||| ||||||||||||||||| |||| |||||| ||||| || ||||||||
Sbjct: 16565 gtctacgcctttgagcatcaaggacacaagcatcgaaatacagagcctgctc 16616



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                         
Query: 437   atctggagcctgaaatcagtttctggtcgacggcataccttcctcagaggaacaatctcc 496
             ||||| |||||| | |||||||||||||| || |||||||||||||| |||||||| |||
Sbjct: 15882 atctgaagcctgtagtcagtttctggtcggcgacataccttcctcagtggaacaatttcc 15941

              
Query: 497   t 497
             |
Sbjct: 15942 t 15942



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 266   gctggtaagggagcagccggcttgtcagatggccctccttgatctgggttgggaaccacg 325
             ||||| |||| |||||| |||||| | | |||| || |||| ||| |||| | ||||| |
Sbjct: 15687 gctggcaaggtagcagcaggcttgcctgttggctcttcttggtcttggttagaaaccatg 15746

                                                                     
Query: 326   gtcacctcggcagtgttcacgtccatcatcttgtgtggcttttggggtttctgctc 381
             || |||||  |||||||||| |||||||| |||||  ||||| |||||||||||||
Sbjct: 15747 gttacctcatcagtgttcacatccatcattttgtgctgctttgggggtttctgctc 15802
to top
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0026F02
          Length = 132237

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 94/109 (86%)
 Strand = Plus / Plus

                                                                         
Query: 495   cctcagagtgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcat 554
             ||||||||| |||||||||||| | ||||||||| ||||| || || |||||| ||||||
Sbjct: 79967 cctcagagtcatcatgatcatagcaaacaagaaatctgcaacgacaacctcttgcatcat 80026

                                                              
Query: 555   gtctgcgcctttgagcatcaagaacacgagcatcaaaatagagggcctg 603
             | || ||| ||||||||||||| ||| ||||||||||||| || |||||
Sbjct: 80027 gcctacgcttttgagcatcaaggacatgagcatcaaaatacagagcctg 80075



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 452   tcagtttctggtcgacggcataccttcctcagaggaacaatctcct 497
             ||||||||||| ||||| || | ||||||||| |||||||| ||||
Sbjct: 78690 tcagtttctggccgacgacacatcttcctcagtggaacaatttcct 78735
to top
>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0040M10
          Length = 162790

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 94/109 (86%)
 Strand = Plus / Plus

                                                                          
Query: 495    cctcagagtgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcat 554
              ||||||||| |||||||||||| | ||||||||| ||||| || || |||||| ||||||
Sbjct: 159868 cctcagagtcatcatgatcatagcaaacaagaaatctgcaacgacaacctcttgcatcat 159927

                                                               
Query: 555    gtctgcgcctttgagcatcaagaacacgagcatcaaaatagagggcctg 603
              | || ||| ||||||||||||| ||| ||||||||||||| || |||||
Sbjct: 159928 gcctacgcttttgagcatcaaggacatgagcatcaaaatacagagcctg 159976



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                            
Query: 452    tcagtttctggtcgacggcataccttcctcagaggaacaatctcct 497
              ||||||||||| ||||| || | ||||||||| |||||||| ||||
Sbjct: 158591 tcagtttctggccgacgacacatcttcctcagtggaacaatttcct 158636
to top
>gb|AC144724.9| Medicago truncatula clone mth2-7g10, complete sequence
          Length = 106731

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 94/112 (83%)
 Strand = Plus / Minus

                                                                         
Query: 495   cctcagagtgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcat 554
             ||||||| ||||| |||||||| ||||| | ||| || ||||| || |||||||||||||
Sbjct: 92894 cctcagattgatcgtgatcatagcgaaccaaaaatctacagcgacaacctcttacatcat 92835

                                                                 
Query: 555   gtctgcgcctttgagcatcaagaacacgagcatcaaaatagagggcctgctc 606
             | || || |||||||||||||| ||| | |||||||| || ||||| |||||
Sbjct: 92834 gcctccgtctttgagcatcaaggacatgggcatcaaagtaaagggcttgctc 92783
to top
>dbj|AB236808.1| Trifolium pratense RNA for hypothetical protein, complete cds, clone:
            C2056
          Length = 2102

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                        
Query: 473  accttcctcagaggaacaatctcctcagagtgatcatgatcataacgaacaagaaacctg 532
            |||||||| || || ||||| |||||||| ||||| |||||||| ||||| | ||| || 
Sbjct: 1460 accttcctaagcggcacaatttcctcagactgatcgtgatcatagcgaaccaaaaatcta 1401

                                                                       
Query: 533  cagcggcaccctcttacatcatgtctgcgcctttgagcatcaagaacacgagcatcaaa 591
            || || || |||||||||||||| || || |||||||||||||| ||| | ||||||||
Sbjct: 1400 caacgacaacctcttacatcatgcctccgtctttgagcatcaaggacatgggcatcaaa 1342
to top
>dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34M22, TM0282,
             complete sequence
          Length = 107979

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                         
Query: 503   tgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcatgtctgcgc 562
             |||||||||||||||||||| | ||| || || || || |||||||||||||| || || 
Sbjct: 79538 tgatcatgatcataacgaaccaaaaatctacaacgacagcctcttacatcatgccttcgt 79479

                           
Query: 563   ctttgagcatcaag 576
             ||||||| ||||||
Sbjct: 79478 ctttgagaatcaag 79465



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                         
Query: 503   tgatcatgatcataacgaacaagaaacctgcagcggcaccctcttacatcatgtctgcgc 562
             |||||||||||||| ||||| | ||| || || || || |||||||||||||| || || 
Sbjct: 91118 tgatcatgatcatagcgaaccaaaaatctacaacgacagcctcttacatcatgcctccgt 91059

                                          
Query: 563   ctttgagcatcaagaacacgagcatcaaa 591
             |||| || |||| | ||||| ||||||||
Sbjct: 91058 ctttcagaatcacggacacgggcatcaaa 91030
to top
>ref|XM_721814.1| Plasmodium yoelii yoelii str. 17XNL dimethyladenosine transferase
            (PY06281) partial mRNA
          Length = 1269

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 184  tgcagcttcaacttttggaata 205
            ||||||||||||||||||||||
Sbjct: 1005 tgcagcttcaacttttggaata 984
to top
>ref|XM_670343.1| Plasmodium berghei strain ANKA dimethyladenosine transferase,
           (PB000758.00.0) partial mRNA
          Length = 1089

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 184 tgcagcttcaacttttggaata 205
           ||||||||||||||||||||||
Sbjct: 795 tgcagcttcaacttttggaata 774
to top
>gb|DQ084081.1| Monarcha chrysomela NADH dehydrogenase subunit 2 (ND2) gene,
           partial cds; mitochondrial
          Length = 1037

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 11  acacaccaacaaacaagtcaacatcg 36
           |||||||||||||| |||||||||||
Sbjct: 941 acacaccaacaaaccagtcaacatcg 966
to top
>emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 in linkage group 2,
             complete sequence
          Length = 173663

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   atctgcacatctgaaactgaa 241
             |||||||||||||||||||||
Sbjct: 97811 atctgcacatctgaaactgaa 97791



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   atctgcacatctgaaactgaa 241
             |||||||||||||||||||||
Sbjct: 82284 atctgcacatctgaaactgaa 82264
to top
>emb|AL954842.7| Zebrafish DNA sequence from clone DKEY-33E5 in linkage group 8, complete
              sequence
          Length = 169016

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 221    atctgcacatctgaaactgaa 241
              |||||||||||||||||||||
Sbjct: 133395 atctgcacatctgaaactgaa 133415
to top
>gb|DQ084093.1| Monarcha leucotis NADH dehydrogenase subunit 2 (ND2) gene, partial
           cds; mitochondrial
          Length = 1037

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 11  acacaccaacaaacaagtcaacatc 35
           |||||||||||||| ||||||||||
Sbjct: 941 acacaccaacaaaccagtcaacatc 965
to top
>ref|XM_513569.1| PREDICTED: Pan troglodytes similar to 4932411G06Rik protein
            (LOC457030), mRNA
          Length = 2145

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  tgcttcatttgcagcttcaa 194
            ||||||||||||||||||||
Sbjct: 1398 tgcttcatttgcagcttcaa 1379
to top
>ref|NM_028481.1| Mus musculus coiled-coil domain containing 18 (Ccdc18), mRNA
          Length = 4682

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  tgcttcatttgcagcttcaa 194
            ||||||||||||||||||||
Sbjct: 3961 tgcttcatttgcagcttcaa 3942
to top
>gb|AC159996.7| Mus musculus chromosome 5, clone RP23-46J11, complete sequence
          Length = 208036

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgcttcatttgcagcttcaa 194
             ||||||||||||||||||||
Sbjct: 28605 tgcttcatttgcagcttcaa 28624
to top
>emb|AL355809.11| Human DNA sequence from clone RP4-650K8 on chromosome 1 Contains part of
              the gene for a novel protein, complete sequence
          Length = 120340

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    agatctggagcctgaaatca 454
              ||||||||||||||||||||
Sbjct: 104256 agatctggagcctgaaatca 104275
to top
>emb|AL139421.12| Human DNA sequence from clone RP4-717I23 on chromosome 1p21.2-22.3
             Contains the 3' end of the NY-SAR-41 gene for sarcoma
             antigen NY-SAR-41, a ribosomal protein L39 (RPL39)
             pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 82367

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   tgcttcatttgcagcttcaa 194
             ||||||||||||||||||||
Sbjct: 50321 tgcttcatttgcagcttcaa 50302
to top
>emb|Z33013.1|MC010 M.capricolum DNA for CONTIG MC010
          Length = 1904

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  atttgcagcttcaacttttg 200
            ||||||||||||||||||||
Sbjct: 1461 atttgcagcttcaacttttg 1442
to top
>emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 3/4
          Length = 349402

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    atttgcagcttcaacttttg 200
              ||||||||||||||||||||
Sbjct: 343570 atttgcagcttcaacttttg 343551
to top
>gb|BC082598.1| Mus musculus coiled-coil domain containing 18, mRNA (cDNA clone
            MGC:100177 IMAGE:30641632), complete cds
          Length = 4682

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  tgcttcatttgcagcttcaa 194
            ||||||||||||||||||||
Sbjct: 3961 tgcttcatttgcagcttcaa 3942
to top
>gb|AC009377.7| Drosophila melanogaster 3L BAC RP98-26P20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 194308

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    tggggtttctgctcaggtgg 387
              ||||||||||||||||||||
Sbjct: 113187 tggggtttctgctcaggtgg 113168
to top
>dbj|AK126045.1| Homo sapiens cDNA FLJ44057 fis, clone TESTI4034912, weakly  similar
            to Intracellular protein transport protein USO1
          Length = 3266

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  tgcttcatttgcagcttcaa 194
            ||||||||||||||||||||
Sbjct: 3110 tgcttcatttgcagcttcaa 3091
to top
>gb|AC009367.9| Drosophila melanogaster 3L BAC RP98-48B15 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 178239

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    tggggtttctgctcaggtgg 387
              ||||||||||||||||||||
Sbjct: 161582 tggggtttctgctcaggtgg 161563
to top
>gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, complete sequence
          Length = 185700

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   agatctggagcctgaaatca 454
             ||||||||||||||||||||
Sbjct: 18733 agatctggagcctgaaatca 18752
to top
>gb|U03969.2|TGDHC1B Tripneustes gratilla dynein heavy chain isotype 1B (DYH1B) mRNA,
             complete cds
          Length = 13230

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   ctcagaggaacaatctcctc 498
             ||||||||||||||||||||
Sbjct: 12617 ctcagaggaacaatctcctc 12636
to top
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    atttgcagcttcaacttttg 200
              ||||||||||||||||||||
Sbjct: 930508 atttgcagcttcaacttttg 930527
to top
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   tgcagcttcaacttttggaa 203
             ||||||||||||||||||||
Sbjct: 68995 tgcagcttcaacttttggaa 69014
to top
>gb|AC154534.2| Mus musculus BAC clone RP23-469P20 from chromosome 16, complete
             sequence
          Length = 178462

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   tttggaataatctctacatt 216
             ||||||||||||||||||||
Sbjct: 89101 tttggaataatctctacatt 89082
to top
>dbj|AK016519.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932411G06 product:similar to DJ717I23.1
            (NOVEL PROTEIN SIMILAR TO XENOPUS LAEVIS SOJO PROTEIN)
            (FRAGMENT) [Homo sapiens], full insert sequence
          Length = 4581

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  tgcttcatttgcagcttcaa 194
            ||||||||||||||||||||
Sbjct: 3956 tgcttcatttgcagcttcaa 3937
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 354     tcttgtgtggcttttggggt 373
               ||||||||||||||||||||
Sbjct: 3415990 tcttgtgtggcttttggggt 3415971
to top
>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence
          Length = 180354

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    agatctggagcctgaaatca 454
              ||||||||||||||||||||
Sbjct: 145776 agatctggagcctgaaatca 145795
to top
>gb|AY211918.1| Homo sapiens sarcoma antigen NY-SAR-41 mRNA, partial cds
          Length = 696

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 tgcttcatttgcagcttcaa 194
           ||||||||||||||||||||
Sbjct: 636 tgcttcatttgcagcttcaa 617
to top
>gb|AC083874.2|AC083874 Homo sapiens chromosome 7 clone RP11-792L21, complete sequence
          Length = 186281

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ttttggacctataggattca 116
             ||||||||||||||||||||
Sbjct: 64833 ttttggacctataggattca 64852
to top
>ref|XM_223734.3| PREDICTED: Rattus norvegicus similar to Sarcoma antigen NY-SAR-41
            (LOC305628), mRNA
          Length = 4356

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  tgcttcatttgcagcttcaa 194
            ||||||||||||||||||||
Sbjct: 4197 tgcttcatttgcagcttcaa 4178
to top
>gb|AC009276.9|AC009276 Homo sapiens chromosome 7 clone RP11-239G19, complete sequence
          Length = 163631

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ttttggacctataggattca 116
              ||||||||||||||||||||
Sbjct: 133647 ttttggacctataggattca 133666
to top
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0069P02
          Length = 163033

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    tcttgtgtggcttttggggt 373
              ||||||||||||||||||||
Sbjct: 131922 tcttgtgtggcttttggggt 131903
to top
>gb|AC035150.1|AC035150 Homo sapiens chromosome 19, BAC CIT978SKB_99E8 (BC67347), complete
             sequence
          Length = 90141

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   cattctgagcatctgcagcc 412
             ||||||||||||||||||||
Sbjct: 72095 cattctgagcatctgcagcc 72076
to top
>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1058_F03
          Length = 150486

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   tcttgtgtggcttttggggt 373
             ||||||||||||||||||||
Sbjct: 84471 tcttgtgtggcttttggggt 84452
to top
>dbj|BS000119.1| Pan troglodytes chromosome 22 clone:RP43-001G01, map 22, complete
             sequences
          Length = 101525

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   ctacattccccatctgcaca 229
             ||||||||||||||||||||
Sbjct: 30995 ctacattccccatctgcaca 31014
to top
>dbj|AB016891.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSF19
          Length = 34508

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     tgtacaacacaccaacaaac 24
             ||||||||||||||||||||
Sbjct: 23720 tgtacaacacaccaacaaac 23739
to top
>dbj|AB063285.1| Homo sapiens HLCS gene for holocarboxylase synthetase, complete cds
          Length = 250000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ctacattccccatctgcaca 229
             ||||||||||||||||||||
Sbjct: 45232 ctacattccccatctgcaca 45213
to top
>dbj|AK130342.1| Homo sapiens cDNA FLJ26832 fis, clone PRS07128
          Length = 3285

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 tgcttcatttgcagcttcaa 194
           ||||||||||||||||||||
Sbjct: 712 tgcttcatttgcagcttcaa 693
to top
>gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromosome unknown, complete
             sequence
          Length = 220538

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgcttcatttgcagcttcaa 194
             ||||||||||||||||||||
Sbjct: 78464 tgcttcatttgcagcttcaa 78483
to top
>gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68 of 83 of the complete
              sequence
          Length = 257692

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    tggggtttctgctcaggtgg 387
              ||||||||||||||||||||
Sbjct: 172316 tggggtttctgctcaggtgg 172297
to top
>gb|AC006213.1|AC006213 Homo sapiens, clone hRPK.15_A_1, complete sequence
          Length = 160754

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   cattctgagcatctgcagcc 412
             ||||||||||||||||||||
Sbjct: 49864 cattctgagcatctgcagcc 49883
to top
>dbj|AP001727.1| Homo sapiens genomic DNA, chromosome 21q, section 71/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    ctacattccccatctgcaca 229
              ||||||||||||||||||||
Sbjct: 168680 ctacattccccatctgcaca 168699
to top
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   tgcagcttcaacttttggaa 203
             ||||||||||||||||||||
Sbjct: 98118 tgcagcttcaacttttggaa 98137
to top
>gb|AF061106.1|AF061106 Petunia x hybrida putative monosaccharide transporter 1 (pmt1)
           mRNA, complete cds
          Length = 1893

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 tgcttcatttgcagcttcaa 194
           ||||||||||||||||||||
Sbjct: 537 tgcttcatttgcagcttcaa 556
to top
>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275,
             containing Familial Mediterranean Fever gene disease
          Length = 239566

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   agatctggagcctgaaatca 454
             ||||||||||||||||||||
Sbjct: 93484 agatctggagcctgaaatca 93503
to top
>ref|NM_206886.2| Homo sapiens coiled-coil domain containing 18 (CCDC18), mRNA
          Length = 4658

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  tgcttcatttgcagcttcaa 194
            ||||||||||||||||||||
Sbjct: 4395 tgcttcatttgcagcttcaa 4376
to top
>dbj|AP000704.2| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB318C2,
            CBR1-HLCS region
          Length = 122672

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  ctacattccccatctgcaca 229
            ||||||||||||||||||||
Sbjct: 5877 ctacattccccatctgcaca 5896


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,334,617
Number of Sequences: 3902068
Number of extensions: 5334617
Number of successful extensions: 105803
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105612
Number of HSP's gapped (non-prelim): 190
length of query: 606
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 583
effective length of database: 17,143,297,704
effective search space: 9994542561432
effective search space used: 9994542561432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top