>TRPV1_RAT (O35433) Transient receptor potential cation channel subfamily V|
           member 1 (TrpV1) (osm-9-like TRP channel 1) (OTRPC1)
           (Vanilloid receptor 1) (Vanilloid receptor type 1-like)
           (Capsaicin receptor)
          Length = 838

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 NSVIRIRCFTTAATTSSTDMILVEPCSQRLQCK 300
           NSV+ +  ++++ T +  DM+LVEP ++ LQ K
Sbjct: 393 NSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDK 425

>TRPV1_RABIT (Q6RX08) Transient receptor potential cation channel subfamily V|
           member 1 (TrpV1) (osm-9-like TRP channel 1) (OTRPC1)
           (Vanilloid receptor 1)
          Length = 842

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 NSVIRIRCFTTAATTSSTDMILVEPCSQRLQCK 300
           NSV+ +  ++++ T +  DM+LVEP ++ LQ K
Sbjct: 396 NSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDK 428

>GYRB_VIBPA (O51859) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 805

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = -2

Query: 621 YVKQQAARNQEDGAGPVKQGSMHVRVPTPDLEEAKIMETIQSELHSLKGGDGISRSFNRI 442
           Y+K + A NQ   +  +   S+HV    P L    + + +Q     +K  D +SR + R 
Sbjct: 546 YIKDEEAMNQYQVSLALDNASLHVNAEAPALAGEALEKLVQQYNAGIKLADRMSRRYPRA 605

Query: 441 TI 436
            +
Sbjct: 606 LV 607

>TRPV1_CANFA (Q697L1) Transient receptor potential cation channel subfamily V|
           member 1 (TrpV1) (osm-9-like TRP channel 1) (OTRPC1)
           (Vanilloid receptor 1)
          Length = 840

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 NSVIRIRCFTTAATTSSTDMILVEPCSQRLQCK 300
           NSV+ +  ++++ T +  DM+LVEP ++ LQ K
Sbjct: 394 NSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDK 426

>TRPV1_MOUSE (Q704Y3) Transient receptor potential cation channel subfamily V|
           member 1 (TrpV1) (osm-9-like TRP channel 1) (OTRPC1)
           (Vanilloid receptor 1)
          Length = 839

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 NSVIRIRCFTTAATTSSTDMILVEPCSQRLQCK 300
           NSV+ +  ++++ T +  DM+LVEP ++ LQ K
Sbjct: 394 NSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDK 426

>TRPV1_HUMAN (Q8NER1) Transient receptor potential cation channel subfamily V|
           member 1 (TrpV1) (osm-9-like TRP channel 1) (OTRPC1)
           (Vanilloid receptor 1) (Capsaicin receptor)
          Length = 839

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 NSVIRIRCFTTAATTSSTDMILVEPCSQRLQCK 300
           NSV+ +  ++++ T +  DM+LVEP ++ LQ K
Sbjct: 394 NSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDK 426

>TRPV1_CAVPO (Q6R5A3) Transient receptor potential cation channel subfamily V|
           member 1 (TrpV1) (osm-9-like TRP channel 1) (OTRPC1)
           (Vanilloid receptor 1)
          Length = 839

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 202 NSVIRIRCFTTAATTSSTDMILVEPCSQRLQCK 300
           NSV+ +  ++++ T +  DM+LVEP ++ LQ K
Sbjct: 395 NSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDK 427

>PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediate|
           filament-associated protein) (IFAP300) (Fragment)
          Length = 4473

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -2

Query: 639 HQQLYNY-VKQQAARNQEDGAGPVKQGSMHVRVPTPDLEEAKIMETIQSELHSLKGGDG 466
           HQ +  +  K + ARN E    P  +G+    +   DL+ AK++ + ++ L SL+   G
Sbjct: 488 HQSIEEFRAKIERARNDESQLSPATRGAYRECLGRLDLQYAKLLNSSKARLRSLESLHG 546


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,736,466
Number of Sequences: 219361
Number of extensions: 1669009
Number of successful extensions: 4672
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4672
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)