| Clone Name | rbaal25c20 |
|---|---|
| Clone Library Name | barley_pub |
>G156_PARPR (P13837) G surface protein, allelic form 156 precursor| Length = 2715 Score = 32.7 bits (73), Expect = 0.64 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Frame = +3 Query: 147 CFSLQDSCPKASLIAAMAARYLLLCSRYRPSLTNRCAVSS-----NPSNHCCSERSSTNN 311 C + Q SC A L A A C+ Y+ SL + S NP+N C + + N Sbjct: 1765 CSTYQQSCTVARLGACQARA---ACATYKSSLQCKFNTSGGKCFWNPTNKTCVDLNCGNI 1821 Query: 312 RATTKEKDSGECI 350 ATT EC+ Sbjct: 1822 EATTLYDTHNECV 1834
>G168_PARPR (P17053) G surface protein, allelic form 168 precursor| Length = 2704 Score = 32.0 bits (71), Expect = 1.1 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +3 Query: 147 CFSLQDSCPKASLIAAMAARYLLLCSRYRPSLTNRCAVSS-----NPSNHCCSERSSTNN 311 C + Q SC A L A A C+ Y+ SL + S NP+N C + + N Sbjct: 1754 CSAYQQSCTVARLGACQARA---ACASYKSSLQCKFNTSGGRCFWNPTNKTCVDLNCGNI 1810 Query: 312 RATTKEKDSGECILL 356 A+T EC+++ Sbjct: 1811 EASTLYDTHNECVVV 1825
>VID21_GIBZE (Q4IB96) Chromatin modification-related protein VID21| Length = 1629 Score = 31.6 bits (70), Expect = 1.4 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -2 Query: 388 KLVVDHQARQLSRMHSPESFSLVVARLFVEDRSEQQWLLGLDDTAQRLVREGRY 227 +L V HQ R S P ++ F E RS QW + DD + LVRE Y Sbjct: 1015 RLYVGHQFRPPSEYPMP-------SQSFFECRSPSQWTIAEDDELRSLVREHSY 1061
>HMDH_CRIGR (P00347) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC| 1.1.1.34) (HMG-CoA reductase) Length = 887 Score = 30.4 bits (67), Expect = 3.2 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 375 STTSFQLSLSESIVTFFRCPSTCCIRHPRLLESGESLS 488 ST S + ++ +VT + P CC R P L+ E LS Sbjct: 346 STLSLKNPITSPVVTPKKAPDNCCRREPLLVRRSEKLS 383
>LRP4_RAT (Q9QYP1) Low-density lipoprotein receptor-related protein 4 precursor| (Multiple epidermal growth factor-like domains 7) Length = 1905 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +3 Query: 210 LLLCSRYRPSLTNRCAVSSNPSNHCCSERSSTNNRATTKEKDSGECILL 356 +++ S R + TN C V++ +H C R+S A E DS C L+ Sbjct: 1603 IIVVSPQRQTGTNACGVNNGGCSHLCFARASDFVCACPDEPDSHPCSLV 1651
>LRP4_HUMAN (O75096) Low-density lipoprotein receptor-related protein 4 precursor| (Multiple epidermal growth factor-like domains 7) Length = 1950 Score = 29.6 bits (65), Expect = 5.4 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +3 Query: 210 LLLCSRYRPSLTNRCAVSSNPSNHCCSERSSTNNRATTKEKDSGECILL 356 +++ S R + TN C V++ H C R+S A E DS C L+ Sbjct: 1648 IIVVSPQRQTGTNACGVNNGGCTHLCFARASDFVCACPDEPDSRPCSLV 1696 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,642,965 Number of Sequences: 219361 Number of extensions: 1475571 Number of successful extensions: 4043 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4041 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)