ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal25c20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, com... 44 0.46
2dbj|AK084578.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 44 0.46
3gb|AC150658.7| Mus musculus BAC clone RP24-474E20 from chromosom... 42 1.8
4gb|AC145570.3| Mus musculus BAC clone RP24-95K23 from chromosome... 42 1.8
5gb|AC147135.2| Mus musculus BAC clone RP24-475E12 from chromosom... 42 1.8
6gb|AC140386.4| Mus musculus BAC clone RP24-88H19 from chromosome... 42 1.8
7emb|AL096829.17|HSJ595K12 Human DNA sequence from clone RP4-595K... 42 1.8
8gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 42 1.8
9gb|AC120393.16| Mus musculus chromosome 7, clone RP24-312B12, co... 42 1.8
10gb|AC174641.3| Mus musculus BAC clone RP24-406C15 from chromosom... 42 1.8
11gb|AC150659.3| Mus musculus BAC clone RP24-147D24 from Y, comple... 42 1.8
12gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, ... 40 7.2
13gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 7.2
14gb|AC149290.1| Solanum demissum chromosome 5 clone PGEC093P17 ma... 40 7.2
15gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09 ma... 40 7.2
16gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C2... 40 7.2
17gb|AC161598.4| Mus musculus BAC clone RP23-360G8 from chromosome... 40 7.2
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.2
19gb|AC129221.3| Mus musculus BAC clone RP24-480M20 from chromosom... 40 7.2
20emb|CT010488.9| Mouse DNA sequence from clone RP23-133A3 on chro... 40 7.2
21ref|XM_819207.1| Trypanosoma brucei TREU927 clone RPCI93-28C22 p... 40 7.2
22gb|AC127576.3| Mus musculus BAC clone RP24-242F12 from chromosom... 40 7.2
23gb|AC127675.4| Mus musculus BAC clone RP24-553O5 from chromosome... 40 7.2
24gb|AC004535.1| Homo sapiens PAC clone RP4-698G21 from 7, complet... 40 7.2
25gb|AC157380.6| Mus musculus chromosome 3, clone RP23-404C21, com... 40 7.2
26gb|AC164645.4| Mus musculus BAC clone RP24-478G6 from chromosome... 40 7.2
27gb|AC022114.4| Homo sapiens chromosome 5 clone CTC-470L9, comple... 40 7.2
28gb|AC008850.7| Homo sapiens chromosome 5 clone CTD-2172I6, compl... 40 7.2
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
31dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
32gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
33gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
34dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 7.2
35emb|AL604064.10| Zebrafish DNA sequence from clone BUSM1-180G5 i... 40 7.2
36dbj|AP001120.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.2
37gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
38gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
39gb|AC149056.6| Mus musculus BAC clone RP23-344G11 from chromosom... 40 7.2
40emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239... 40 7.2
41emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575... 40 7.2
42gb|AC149279.3| Mus musculus BAC clone RP24-89F23 from 7, complet... 40 7.2
43dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.2

>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 7      gaagtttcaccacaaaacaaac 28
              ||||||||||||||||||||||
Sbjct: 120599 gaagtttcaccacaaaacaaac 120620



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>dbj|AK084578.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330016N20 product:unclassifiable, full
            insert sequence
          Length = 2076

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 7    gaagtttcaccacaaaacaaac 28
            ||||||||||||||||||||||
Sbjct: 1688 gaagtttcaccacaaaacaaac 1667



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>gb|AC150658.7| Mus musculus BAC clone RP24-474E20 from chromosome y, complete sequence
          Length = 204836

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     agaaagaagcaaaatattaaa 78
              |||||||||||||||||||||
Sbjct: 146109 agaaagaagcaaaatattaaa 146129



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>gb|AC145570.3| Mus musculus BAC clone RP24-95K23 from chromosome Y, complete sequence
          Length = 168764

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     agaaagaagcaaaatattaaa 78
              |||||||||||||||||||||
Sbjct: 102537 agaaagaagcaaaatattaaa 102557



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>gb|AC147135.2| Mus musculus BAC clone RP24-475E12 from chromosome Y, complete sequence
          Length = 222469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     agaaagaagcaaaatattaaa 78
              |||||||||||||||||||||
Sbjct: 201393 agaaagaagcaaaatattaaa 201373



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     agaaagaagcaaaatattaaa 78
              |||||||||||||||||||||
Sbjct: 155135 agaaagaagcaaaatattaaa 155115



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>gb|AC140386.4| Mus musculus BAC clone RP24-88H19 from chromosome Y, complete sequence
          Length = 222469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     agaaagaagcaaaatattaaa 78
              |||||||||||||||||||||
Sbjct: 201393 agaaagaagcaaaatattaaa 201373



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     agaaagaagcaaaatattaaa 78
              |||||||||||||||||||||
Sbjct: 155135 agaaagaagcaaaatattaaa 155115



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>emb|AL096829.17|HSJ595K12 Human DNA sequence from clone RP4-595K12 on chromosome 1p31.2-31.3
             Contains the 5' end of a novel gene (MGC34032) and a
             ribosomal protein L29 (RPL29) pseudogene, complete
             sequence
          Length = 135983

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    aaagaagcaaaatattaaact 80
             |||||||||||||||||||||
Sbjct: 34661 aaagaagcaaaatattaaact 34681



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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 176     ggcgtccctgatcgccgctat 196
               |||||||||||||||||||||
Sbjct: 1229062 ggcgtccctgatcgccgctat 1229042



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>gb|AC120393.16| Mus musculus chromosome 7, clone RP24-312B12, complete sequence
          Length = 183977

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 38     atatacaatatatacacatta 58
              |||||||||||||||||||||
Sbjct: 171173 atatacaatatatacacatta 171193



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>gb|AC174641.3| Mus musculus BAC clone RP24-406C15 from chromosome y, complete sequence
          Length = 174265

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    agaaagaagcaaaatattaaa 78
             |||||||||||||||||||||
Sbjct: 61870 agaaagaagcaaaatattaaa 61850



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    agaaagaagcaaaatattaaa 78
             |||||||||||||||||||||
Sbjct: 15613 agaaagaagcaaaatattaaa 15593



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>gb|AC150659.3| Mus musculus BAC clone RP24-147D24 from Y, complete sequence
          Length = 145892

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     agaaagaagcaaaatattaaa 78
              |||||||||||||||||||||
Sbjct: 133370 agaaagaagcaaaatattaaa 133350



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>gb|AC123528.2| Oryza sativa chromosome 11 clone  OSJNBa0078E03, complete sequence
          Length = 149493

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    tttcaccacaaaacaaacat 30
             ||||||||||||||||||||
Sbjct: 78170 tttcaccacaaaacaaacat 78151



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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     tgaaagcattgtcacgttct 423
               ||||||||||||||||||||
Sbjct: 1129224 tgaaagcattgtcacgttct 1129205



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>gb|AC149290.1| Solanum demissum chromosome 5 clone PGEC093P17 map MAP_LOC, complete
             sequence
          Length = 200238

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 58    agaaagaagcaaaatattaaactacaat 85
             ||||| ||||| ||||||||||||||||
Sbjct: 36502 agaaataagcataatattaaactacaat 36475



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>gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09 map MAP_LOC, complete
              sequence
          Length = 133983

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 58     agaaagaagcaaaatattaaactacaat 85
              ||||| ||||| ||||||||||||||||
Sbjct: 112529 agaaataagcataatattaaactacaat 112502



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>gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C22, complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   tgaaagcattgtcacgttct 423
             ||||||||||||||||||||
Sbjct: 18353 tgaaagcattgtcacgttct 18372



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>gb|AC161598.4| Mus musculus BAC clone RP23-360G8 from chromosome 7, complete sequence
          Length = 216748

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    atatacaatatatacacatt 57
             ||||||||||||||||||||
Sbjct: 90072 atatacaatatatacacatt 90091



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 11      tttcaccacaaaacaaacat 30
               ||||||||||||||||||||
Sbjct: 8069955 tttcaccacaaaacaaacat 8069974



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>gb|AC129221.3| Mus musculus BAC clone RP24-480M20 from chromosome 7, complete sequence
          Length = 202119

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     atatacaatatatacacatt 57
              ||||||||||||||||||||
Sbjct: 155537 atatacaatatatacacatt 155518



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>emb|CT010488.9| Mouse DNA sequence from clone RP23-133A3 on chromosome 9, complete
              sequence
          Length = 219139

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 480    tctctgtcagtcagtacctgaattcttg 507
              ||||||||||| ||| ||||||||||||
Sbjct: 176674 tctctgtcagtaagttcctgaattcttg 176647



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>ref|XM_819207.1| Trypanosoma brucei TREU927 clone RPCI93-28C22 phosphatidylinositol
            4-kinase alpha (Tb927.3.4020) partial mRNA
          Length = 6939

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 404  tgaaagcattgtcacgttct 423
            ||||||||||||||||||||
Sbjct: 4925 tgaaagcattgtcacgttct 4944



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>gb|AC127576.3| Mus musculus BAC clone RP24-242F12 from chromosome 7, complete sequence
          Length = 169210

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     atatacaatatatacacatt 57
              ||||||||||||||||||||
Sbjct: 139505 atatacaatatatacacatt 139486



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>gb|AC127675.4| Mus musculus BAC clone RP24-553O5 from chromosome 7, complete sequence
          Length = 155097

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     atatacaatatatacacatt 57
              ||||||||||||||||||||
Sbjct: 107801 atatacaatatatacacatt 107820



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>gb|AC004535.1| Homo sapiens PAC clone RP4-698G21 from 7, complete sequence
          Length = 109469

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    cattagaaagaagcaaaata 73
             ||||||||||||||||||||
Sbjct: 84339 cattagaaagaagcaaaata 84358



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>gb|AC157380.6| Mus musculus chromosome 3, clone RP23-404C21, complete sequence
          Length = 196528

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     agaaagaagcaaaatattaaacta 81
              |||||||| |||||||||||||||
Sbjct: 112596 agaaagaatcaaaatattaaacta 112619



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>gb|AC164645.4| Mus musculus BAC clone RP24-478G6 from chromosome 7, complete sequence
          Length = 211510

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     atatacaatatatacacatt 57
              ||||||||||||||||||||
Sbjct: 188405 atatacaatatatacacatt 188386



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>gb|AC022114.4| Homo sapiens chromosome 5 clone CTC-470L9, complete sequence
          Length = 102387

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 375  tctaccactagtttccagtt 394
            ||||||||||||||||||||
Sbjct: 1118 tctaccactagtttccagtt 1137



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>gb|AC008850.7| Homo sapiens chromosome 5 clone CTD-2172I6, complete sequence
          Length = 131805

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    tctaccactagtttccagtt 394
              ||||||||||||||||||||
Sbjct: 107214 tctaccactagtttccagtt 107233



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 11      tttcaccacaaaacaaacat 30
               ||||||||||||||||||||
Sbjct: 1677263 tttcaccacaaaacaaacat 1677244



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 11      tttcaccacaaaacaaacat 30
               ||||||||||||||||||||
Sbjct: 1723163 tttcaccacaaaacaaacat 1723144



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 11      tttcaccacaaaacaaacat 30
               ||||||||||||||||||||
Sbjct: 8067790 tttcaccacaaaacaaacat 8067809



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>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0019J12, complete sequence
          Length = 195583

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 11   tttcaccacaaaacaaacat 30
            ||||||||||||||||||||
Sbjct: 1385 tttcaccacaaaacaaacat 1404



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>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10,
              complete sequence
          Length = 143298

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     tttcaccacaaaacaaacat 30
              ||||||||||||||||||||
Sbjct: 137318 tttcaccacaaaacaaacat 137337



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>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 426     aggtgcccttccacctgctg 445
               ||||||||||||||||||||
Sbjct: 1179834 aggtgcccttccacctgctg 1179853



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>emb|AL604064.10| Zebrafish DNA sequence from clone BUSM1-180G5 in linkage group 3,
             complete sequence
          Length = 136041

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     tttgtgaagtttcaccacaaaaca 25
             |||||||| |||||||||||||||
Sbjct: 73886 tttgtgaattttcaccacaaaaca 73909



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>dbj|AP001120.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-677O4, complete
             sequence
          Length = 181123

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    atatacacattagaaagaagcaaa 70
             |||||||||||||||| |||||||
Sbjct: 73807 atatacacattagaaaaaagcaaa 73784



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 11      tttcaccacaaaacaaacat 30
               ||||||||||||||||||||
Sbjct: 1720884 tttcaccacaaaacaaacat 1720865



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 11      tttcaccacaaaacaaacat 30
               ||||||||||||||||||||
Sbjct: 1677241 tttcaccacaaaacaaacat 1677222



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>gb|AC149056.6| Mus musculus BAC clone RP23-344G11 from chromosome 7, complete sequence
          Length = 199549

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    atatacaatatatacacatt 57
             ||||||||||||||||||||
Sbjct: 71725 atatacaatatatacacatt 71706



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>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104307

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tttcaccacaaaacaaacat 30
             ||||||||||||||||||||
Sbjct: 89658 tttcaccacaaaacaaacat 89677



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>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 91883

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tttcaccacaaaacaaacat 30
             ||||||||||||||||||||
Sbjct: 15661 tttcaccacaaaacaaacat 15680



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>gb|AC149279.3| Mus musculus BAC clone RP24-89F23 from 7, complete sequence
          Length = 210311

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    atatacaatatatacacatt 57
             ||||||||||||||||||||
Sbjct: 82011 atatacaatatatacacatt 81992



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 439    cctgctgcatcaggcaccccaggt 462
              |||| |||||||||||||||||||
Sbjct: 113994 cctggtgcatcaggcaccccaggt 114017


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,741,323
Number of Sequences: 3902068
Number of extensions: 4741323
Number of successful extensions: 95983
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95664
Number of HSP's gapped (non-prelim): 319
length of query: 530
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 507
effective length of database: 17,143,297,704
effective search space: 8691651935928
effective search space used: 8691651935928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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