ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal24n12 |
|---|---|
| Clone Library Name | barley_pub |
>RAD5_SCHPO (P36607) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1133 Score = 85.9 bits (211), Expect = 1e-16 Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 1/121 (0%) Frame = -1 Query: 649 PDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG 470 P+KV+IFSQF + +I L + YA M + +AL ++ DP L++ Sbjct: 981 PEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPDVNVLIISL 1040 Query: 469 TAA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 A +GL+L+ NHVF+M+P W S+E Q I R HR+G +P+ V +R T+EE+ML+ Sbjct: 1041 KAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERMLK 1100 Query: 292 L 290 + Sbjct: 1101 I 1101
>RAD5_CRYNE (Q5KPG8) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1198 Score = 76.3 bits (186), Expect = 9e-14 Identities = 40/140 (28%), Positives = 78/140 (55%), Gaps = 3/140 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKY--KEDPTCMALLMDG 470 K ++FSQF + +IE LT GI + M + + + ++ K + + L+ Sbjct: 1037 KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGRKTNEPLILLISLK 1096 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 +GL+L+ N+VFLM+ W+ ++E+Q I R HR+G +P+ V ++GT+E++++++ Sbjct: 1097 AGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKI 1156 Query: 289 LQDTSACRN-MVNKGASGTE 233 + +A N ++ GA E Sbjct: 1157 QRSKTALVNASLSNGAKTKE 1176
>RAD5_GIBZE (Q4IJ84) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1154 Score = 70.5 bits (171), Expect = 5e-12 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 K ++FSQF + +IE LT A I + + M + + L ++ E LL+ A Sbjct: 1004 KSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFTEKKGFTILLLSLRA 1063 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 +GL+L+ VF+M+P W ++E Q I R HRMG + V+ ++ ++EE+ML++ Sbjct: 1064 GGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQEAEVQVKRFVVKESVEERMLKV 1122
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 69.3 bits (168), Expect = 1e-11 Identities = 32/116 (27%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 K I+FSQ+ + +++ L+ ++ + + + L ++ ED + + LLM A Sbjct: 881 KSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKA 940 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM 299 +G++L+ ++ F+M+P W+ ++EEQ + R HR+G T+ + + ++GT+EE+M Sbjct: 941 GGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERM 996
>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)| Length = 1708 Score = 68.6 bits (166), Expect = 2e-11 Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 2/137 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+++ Q I ++E+ LT Y + L +R + +++ P L+ A Sbjct: 1436 RVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRA 1495 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM-LQL 290 LG++L+ + V + W+ +++ Q + RAHR+G TR + V L RGTIEE++ + Sbjct: 1496 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRA 1555 Query: 289 LQDTSACRNMVNKGASG 239 LQ R +++ GA+G Sbjct: 1556 LQKEEVQRVVISGGAAG 1572
>RAD5_YARLI (Q6C2R8) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1025 Score = 68.2 bits (165), Expect = 2e-11 Identities = 39/139 (28%), Positives = 67/139 (48%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 K ++FSQF ++ +I+ +L I + + L + + L+ T Sbjct: 876 KSVVFSQFTSYLDIIQTELRREKIQAFRFDGTLSRQQRTDVLKAFGLSKGSVLLISLKTG 935 Query: 463 ALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLLQ 284 +GL+L NH F+M+P W + E Q I R HRMG T+ ++V + ++EE+ML++ Q Sbjct: 936 GVGLNLVTANHAFIMDPWWTFAQEAQAIDRIHRMGQTKDVHVTRFIVENSVEEKMLKIQQ 995 Query: 283 DTSACRNMVNKGASGTENE 227 + MV G G + Sbjct: 996 -----QKMVLAGTLGMSEQ 1009
>BTAF1_HUMAN (O14981) TATA-binding protein-associated factor 172 (EC 3.6.1.-)| (ATP-dependent helicase BTAF1) (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B-TFIID transcription factor-associated 170 kDa subunit) Length = 1849 Score = 68.2 bits (165), Expect = 2e-11 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 4/122 (3%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLT---IAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMD 473 +++IF Q + ++E L + +TY + +P G + S ++++ DP+ LL+ Sbjct: 1646 RILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLT 1705 Query: 472 G-TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 LGL+L+ + V +E W+ + Q + RAHR+G R +NV L RGT+EE+++ Sbjct: 1706 THVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIM 1765 Query: 295 QL 290 L Sbjct: 1766 GL 1767
>INO80_CRYNE (Q5KHM0) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1765 Score = 67.8 bits (164), Expect = 3e-11 Identities = 42/161 (26%), Positives = 82/161 (50%), Gaps = 2/161 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+++ Q + + +IE+ L Y + P+ +R +T ++ +P + A Sbjct: 1471 RVLLYFQMTKMMDLIEEYLIFRQYKYLRLDGSSPIAERRDMVTSWQTNPDIFVFCLSTRA 1530 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ S + Q + RAHR+G T+ + V L RGTIEE++LQ+ Sbjct: 1531 GGLGINLTAADTVIFYDHDWNPSSDAQAMDRAHRVGQTKQVTVYRLVARGTIEERILQMA 1590 Query: 286 QDTSACRNMVNKGASGTENEGG-ARPHRSLHDFAESSYLAK 167 + +++V GT++ A+P + F + LA+ Sbjct: 1591 RGKKDIQDVV----VGTKSVSDVAKPSEIVSLFMDDEELAE 1627
>YBMA_SCHPO (Q10332) Probable ATP-dependent helicase C582.10c in chromosome II| (EC 3.6.1.-) Length = 830 Score = 67.0 bits (162), Expect = 5e-11 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 1/119 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMD-GT 467 K IIFSQF + +I+ L AGI + M + +L + D LL Sbjct: 672 KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKC 731 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 ALGL+L+ + V L + W+ ++EEQ I R HR+G R + V L + TIEE++++L Sbjct: 732 GALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVEL 790
>RAD5_ASPFU (Q4WVM1) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1245 Score = 67.0 bits (162), Expect = 5e-11 Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 31/177 (17%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKY--------------- 509 K ++FSQF + +I QLT AGI+Y + MP + L ++ Sbjct: 1060 KSVVFSQFTSFLDLIGAQLTKAGISYVRLDGTMPQKARAEVLAEFNRTETFHQEEIDEDE 1119 Query: 508 --------------KEDPTCMALLMDGTAA--LGLDLSFVNHVFLMEPIWDRSMEEQVIS 377 + P A+L+ A +GL+L+ ++VF+M+P W ++E Q I Sbjct: 1120 GPDTPRVRISSKNSRSSPKSPAVLLISLRAGGVGLNLTAASNVFMMDPWWSFAIEAQAID 1179 Query: 376 RAHRMGATRPINVETLAMRGTIEEQMLQLLQDTSACRNMVNKGASGTENEGGARPHR 206 R HRMG R ++V ++ +IE +ML++ + + G +E R R Sbjct: 1180 RVHRMGQLRDVSVTRFIVKDSIEGRMLRVQERKMNIAGSLGLRVGGDGSEDEKRKER 1236
>RAD5_EMENI (Q5BHD6) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1202 Score = 66.6 bits (161), Expect = 7e-11 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 35/181 (19%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE------------- 503 K ++FSQF + +I QLT AGI++ + M + L ++ + Sbjct: 1016 KSVVFSQFTSFLDLIGPQLTKAGISFVRLDGTMAQKARAEVLAQFTKFETFTQEELDQAE 1075 Query: 502 ----------------------DPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEE 389 PT + + + +GL+L+ ++VF+M+P W ++E Sbjct: 1076 STSAPSGLTPTPKTPKQSSSPSSPTVLLISLKA-GGVGLNLTAASNVFMMDPWWSFAIEA 1134 Query: 388 QVISRAHRMGATRPINVETLAMRGTIEEQMLQLLQDTSACRNMVNKGASGTENEGGARPH 209 Q I R HRMG R +NV ++ +IEE+ML++ + R M G+ G EG Sbjct: 1135 QAIDRVHRMGQLRDVNVVRFIVKDSIEERMLRVQE-----RKMGIAGSLGLMGEGNEEER 1189 Query: 208 R 206 R Sbjct: 1190 R 1190
>INO80_EMENI (Q5BAZ5) Putative DNA helicase ino80 (EC 3.6.1.-)| Length = 1612 Score = 66.2 bits (160), Expect = 9e-11 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+++ Q I ++E+ LT Y + L +R + +++ P L+ A Sbjct: 1339 RVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRA 1398 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM-LQL 290 LG++L+ + V + W+ +++ Q + RAHR+G TR + V L R TIEE++ + Sbjct: 1399 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTIEERIRKRA 1458 Query: 289 LQDTSACRNMVNKGASG 239 LQ R +++ GA+G Sbjct: 1459 LQKEEVQRVVISGGAAG 1475
>INO80_DEBHA (Q6BGY8) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1364 Score = 66.2 bits (160), Expect = 9e-11 Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+I+ Q + + ++E+ LT Y + L +R + ++ P L+ A Sbjct: 1160 RVLIYFQMTKMMDLMEEYLTYRQHKYIRLDGSSKLDDRRDLVHDWQTKPEIFVFLLSTRA 1219 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +++ Q + RAHR+G TR + V L RGTIEE+M Sbjct: 1220 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLTRGTIEERMRDRA 1279 Query: 286 QDTSACRNMVNKGASGTENE 227 + + +V +G S N+ Sbjct: 1280 KQKEQVQQVVMEGKSAIANK 1299
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 66.2 bits (160), Expect = 9e-11 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 1/120 (0%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 +K I+FSQ+ + ++E L G + + + L ++ E LLM Sbjct: 1128 EKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLK 1187 Query: 466 AA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A +GL+L+ + VFLM+P W+ ++EEQ I R HR+G R + V ++ T+EE+M Q+ Sbjct: 1188 AGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQV 1247
>MOT1_SCHPO (O43065) Probable helicase mot1 (EC 3.6.1.-) (TBP-associated factor| mot1) (Modifier of transcription 1) Length = 1953 Score = 65.9 bits (159), Expect = 1e-10 Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 5/145 (3%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQL---TIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMD 473 +V+IF Q + + ++E+ L T+ +TY + + ++ A+TK+ DP+ LL+ Sbjct: 1738 RVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLLT 1797 Query: 472 G-TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 LGL+L+ + V +E W+ + Q + RAHR+G + +NV L RG +EE+++ Sbjct: 1798 THVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIM 1857 Query: 295 QLLQ-DTSACRNMVNKGASGTENEG 224 L + + +VN+ +G + G Sbjct: 1858 GLQRFKMNVASTVVNQQNAGLSSIG 1882
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 65.5 bits (158), Expect = 2e-10 Identities = 40/126 (31%), Positives = 73/126 (57%), Gaps = 7/126 (5%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIA-GITYAGMYS---PMPLGTKRSALTKYK-EDPTCMAL 482 ++V+IFSQF ++ ++E++LT A +Y + L + S L + +D + + Sbjct: 1013 EQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKI 1072 Query: 481 LMDGTAA--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIE 308 L+ A +GL+L+ +H ++M+P W SME+Q I R HR+G T + V ++ +IE Sbjct: 1073 LLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIE 1132 Query: 307 EQMLQL 290 E+ML++ Sbjct: 1133 EKMLRI 1138
>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1904 Score = 65.5 bits (158), Expect = 2e-10 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 2/154 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+++ Q I ++E+ LT Y + L +R + ++ P L+ A Sbjct: 1644 RVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDRRDTVHDFQTRPEIFIFLLSTRA 1703 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM-LQL 290 LG++L+ + V + W+ +++ Q + RAHR+G T+ + V L RGTIEE++ + Sbjct: 1704 GGLGINLTTADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRA 1763 Query: 289 LQDTSACRNMVNKGASGTENEGGARPHRSLHDFA 188 +Q R ++ G + + G P D A Sbjct: 1764 MQKEEVQRVVIQGGGASVDFSGRRAPENRNRDIA 1797
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 65.5 bits (158), Expect = 2e-10 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 7/126 (5%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLT-IAGITYAGMYS---PMPLGTKRSALTKYK-EDPTCMAL 482 ++V++FSQF ++ ++E QL + +Y + L + + L +K +D + Sbjct: 994 EQVVVFSQFSSYLDILESQLNEVYSSNKLKVYKFDGRLSLKERTAVLEDFKVKDYAVQKV 1053 Query: 481 LMDGTAA--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIE 308 L+ A +GL+L+ ++ F+M+P W SME+Q I R HR+G T + V + G+IE Sbjct: 1054 LLLSLKAGGVGLNLTCASYAFMMDPWWSPSMEDQAIDRIHRIGQTNSVKVIRFVIDGSIE 1113 Query: 307 EQMLQL 290 E+ML++ Sbjct: 1114 EKMLRI 1119
>INO80_YEAST (P53115) Putative DNA helicase INO80 (EC 3.6.1.-)| (Inositol-requiering protein 80) Length = 1489 Score = 65.1 bits (157), Expect = 2e-10 Identities = 36/139 (25%), Positives = 72/139 (51%), Gaps = 1/139 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+I+ Q + + ++E+ LT + + L +R + ++ +P L+ A Sbjct: 1317 RVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRA 1376 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +++ Q + RAHR+G TR + V L +RGTIEE+M Sbjct: 1377 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRA 1436 Query: 286 QDTSACRNMVNKGASGTEN 230 + + +V +G + +N Sbjct: 1437 KQKEQVQQVVMEGKTQEKN 1455
>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)| Length = 2001 Score = 64.7 bits (156), Expect = 3e-10 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 6/158 (3%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+++ Q I ++E+ LT Y + L +R + ++ P L+ A Sbjct: 1716 RVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQTRPEIFIFLLSTRA 1775 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +++ Q + RAHR+G T+ + V L RGTIEE++ + Sbjct: 1776 GGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRA 1835 Query: 286 QDTSACRNMVNKGAS-----GTENEGGARPHRSLHDFA 188 + +V G S G + G P D A Sbjct: 1836 MQKEEVQRVVITGGSSAAGGGVDFSGRRAPENRNRDIA 1873
>INO80_KLULA (Q6CNY4) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1489 Score = 64.3 bits (155), Expect = 3e-10 Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 1/133 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+I+ Q + + ++E+ LT T+ + L +R + ++ P L+ A Sbjct: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +++ Q + RAHR+G TR + V L +RGTIEE+M Sbjct: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456 Query: 286 QDTSACRNMVNKG 248 + + +V +G Sbjct: 1457 KQKEHVQQVVMEG 1469
>INO80_USTMA (Q4PGL2) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1910 Score = 64.3 bits (155), Expect = 3e-10 Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 1/160 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+I+ Q I ++E+ L Y + + +R +T ++ P L+ A Sbjct: 1597 RVLIYFQMTRMIDLMEEYLIYRQYKYLRLDGASKISDRRDMVTDWQTKPELFIFLLSTRA 1656 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ S + Q + RAHR+G T+ + V L +GTI+E++++L Sbjct: 1657 GGLGINLTAADTVIFYDHDWNPSNDSQAMDRAHRLGQTKQVTVYRLITKGTIDERIVRLA 1716 Query: 286 QDTSACRNMVNKGASGTENEGGARPHRSLHDFAESSYLAK 167 ++ +++V G G A+P + + LA+ Sbjct: 1717 RNKKEVQDIV-VGTKAYSETGMAKPQEIVSLLLDDDELAE 1755
>INO80_CANGA (Q6FV37) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1484 Score = 62.8 bits (151), Expect = 1e-09 Identities = 35/139 (25%), Positives = 71/139 (51%), Gaps = 1/139 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+I+ Q + + ++E+ LT + + L +R + ++ +P L+ A Sbjct: 1313 RVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFIFLLSTRA 1372 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +++ Q + RAHR+G T+ + V L +RGTIEE+M Sbjct: 1373 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLLVRGTIEERMRDRA 1432 Query: 286 QDTSACRNMVNKGASGTEN 230 + + +V +G + N Sbjct: 1433 KQKEQVQQVVMEGKTKDTN 1451
>ERCC6_HUMAN (Q03468) DNA excision repair protein ERCC-6 (EC 3.6.1.-)| (ATP-dependent helicase ERCC6) (Cockayne syndrome protein CSB) Length = 1493 Score = 62.8 bits (151), Expect = 1e-09 Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMA-LLMDGT 467 +V++FSQ + + ++E L TY M + +++ +T+Y ED + LL Sbjct: 857 RVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRV 916 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM 299 LG++L+ N V + +P W+ S + Q RA R+G + + V L GTIEE++ Sbjct: 917 GGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 972
>RDH54_YEAST (P38086) DNA repair and recombination protein RDH54 (RAD homolog 54)| (Recombination factor TID1) (Two-hybrid interaction with DMC1 protein 1) [Includes: DNA topoisomerase (EC 5.99.1.-); Putative helicase (EC 3.6.1.-)] Length = 924 Score = 62.8 bits (151), Expect = 1e-09 Identities = 31/119 (26%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG- 470 +KV++ S + + + +IE + +AG+++ + +P + S +T + +P L+ Sbjct: 648 EKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLLSAK 707 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 + +GL+L + + L + W+ S++ Q +SR HR G +P + L G I+E++LQ Sbjct: 708 SGGVGLNLVGRSRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQ 766
>RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)| Length = 861 Score = 62.4 bits (150), Expect = 1e-09 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 1/119 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 K I+FSQF + +I +L AG + M + + + + D L+ A Sbjct: 710 KSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFLVSLKA 769 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 + L+L+ + VF+M+P W+ +++ Q + R HR+G RPI V TL + +IE ++++L Sbjct: 770 GGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIEL 828
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 62.0 bits (149), Expect = 2e-09 Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 4/141 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE----DPTCMALLM 476 K ++ SQF + +IE L +G + + M + ++ +++ PT M L + Sbjct: 847 KSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSL 906 Query: 475 DGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 +GL+L + VFLM+P W+ + E+Q R HR+G + + + ++ ++EE ML Sbjct: 907 KA-GGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENML 965 Query: 295 QLLQDTSACRNMVNKGASGTE 233 + +Q+T + + GA GT+ Sbjct: 966 K-IQNT---KRDLAAGAFGTK 982
>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1085 Score = 62.0 bits (149), Expect = 2e-09 Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 7/126 (5%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGIT-YAGMYS---PMPLGTKRSALTKYKEDPTC---M 488 ++V++FSQF ++ ++E +L + + +Y + L + + L K+ E + Sbjct: 929 EQVVVFSQFSSYLDILENELRQSFASDICEIYKFDGRLDLKERSNVLAKFTEKSLVKMKV 988 Query: 487 ALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIE 308 LL +GL+L+ +H F+M+P W ME+Q + R HR+G + + + + +IE Sbjct: 989 LLLSLKAGGVGLNLTCASHAFIMDPWWSPGMEDQAMDRIHRIGQSNTVKIYRFIVENSIE 1048 Query: 307 EQMLQL 290 E+ML++ Sbjct: 1049 EKMLRI 1054
>HRP1_SCHPO (Q9US25) Chromodomain helicase hrp1 (EC 3.6.1.-) (ATP-dependent| helicase hrp1) Length = 1373 Score = 62.0 bits (149), Expect = 2e-09 Identities = 29/119 (24%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYK--EDPTCMALLMDG 470 +V+IFSQ + ++++ + +++ G Y + +P +R ++ + + P + LL Sbjct: 722 RVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTR 781 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V + + W+ + Q ++RAHR+G +NV + T+EE +L+ Sbjct: 782 AGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILE 840
>RAD5_NEUCR (Q7S1P9) DNA repair protein rad-5 (EC 3.6.1.-)| Length = 1222 Score = 61.6 bits (148), Expect = 2e-09 Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 1/119 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE-DPTCMALLMDGT 467 K ++ SQF + +I LT I++ + M + + LT+++ + C+ LL Sbjct: 1070 KSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKARAAVLTEFQSTNKFCVLLLSLKA 1129 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 +GL+L+ V++M+P W ++E Q I R HRMG + V ++ ++E +ML++ Sbjct: 1130 GGVGLNLTSAKRVYMMDPWWSFAVEAQAIDRVHRMGQEDEVRVYRFIVKQSVEMRMLRV 1188
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 61.2 bits (147), Expect = 3e-09 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Frame = -1 Query: 658 QTLPDKVIIFSQFLEHIHVIEQQLTIAG-----ITYAGMYSPMPLGTKRSALTKYKEDPT 494 Q+ KVI+FSQF ++ +I+ +L +A + G + + + ED Sbjct: 924 QSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMNDRTKLLESFNQPLEDGK 983 Query: 493 CMALLMDGTAA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRG 317 LL+ A +GL+L+ + ++M+P W S+E+Q I R HR+G + V M Sbjct: 984 VAILLLSLKAGGVGLNLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQNETVKVVRFIMEN 1043 Query: 316 TIEEQMLQL 290 +IE +ML++ Sbjct: 1044 SIETKMLKI 1052
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 60.5 bits (145), Expect = 5e-09 Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 4/122 (3%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE----DPTCMALLM 476 K ++ SQF + +IE L +G + + M + ++ ++ PT M L + Sbjct: 853 KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912 Query: 475 DGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 +GL+LS + VFLM+P W+ + E+Q R HR+G + + + ++ ++EE ML Sbjct: 913 KA-GGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENML 971 Query: 295 QL 290 ++ Sbjct: 972 KI 973
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 60.5 bits (145), Expect = 5e-09 Identities = 36/134 (26%), Positives = 73/134 (54%), Gaps = 3/134 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKY-KEDPTCMALLMDGT 467 K ++FSQF + + ++E L AG T + M + + + ++ + T +L+ Sbjct: 727 KSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASL 786 Query: 466 AA--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 A G++L+ + V+L +P W+ ++EEQ + R HR+G + + + + R +IEE++L+ Sbjct: 787 KASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLE 846 Query: 292 LLQDTSACRNMVNK 251 L Q +N+ N+ Sbjct: 847 LQQKK---KNLANE 857
>MOT1_YEAST (P32333) TATA-binding protein-associated factor MOT1 (EC 3.6.1.-)| (TBP-associated factor MOT1) (Modifier of transcription 1) Length = 1867 Score = 60.1 bits (144), Expect = 6e-09 Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 6/157 (3%) Frame = -1 Query: 691 QDDNNP-QTRLPQTLPDKVIIFSQFLEHIHVIEQQLT---IAGITYAGMYSPMPLGTKRS 524 QD N P Q + Q + +IF Q + + ++E L + +TY + + ++ Sbjct: 1634 QDQNFPIQNVISQ---HRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQK 1690 Query: 523 ALTKYKEDPTCMALLMDG-TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRP 347 + K+ EDP+ LL+ LGL+L+ + V +E W+ + Q + RAHR+G + Sbjct: 1691 VVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKV 1750 Query: 346 INVETLAMRGTIEEQMLQLLQ-DTSACRNMVNKGASG 239 +NV + +GT+EE+++ L + + +VN+ SG Sbjct: 1751 VNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSG 1787
>RAD5_USTMA (Q4PGG5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1387 Score = 60.1 bits (144), Expect = 6e-09 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 5/153 (3%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE-DPT---CMALLM 476 K +IFSQF + +IE LT + + P + + +++ PT + L+ Sbjct: 1229 KGVIFSQFTSFLDLIEPVLTRYRFHFLRLDGSTPQKVRDKLVLEFQSPSPTNHVVLFLIS 1288 Query: 475 DGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 +GL+L+ N ++L++ W+ S+E Q I R HR G T P++V ++ +IE+++L Sbjct: 1289 LKAGGVGLNLTAANKIWLLDFWWNSSIENQAIDRIHRFGQTSPVSVFRYIIKDSIEDRIL 1348 Query: 295 QLLQDTSACRNMVNKGASGTENE-GGARPHRSL 200 L+Q ++M+ K A T+N G +P+ + Sbjct: 1349 -LIQKR---KDMLIKHALNTDNHPHGTKPNSEM 1377
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 60.1 bits (144), Expect = 6e-09 Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 4/154 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE----DPTCMALLM 476 K ++ SQF + +IE L +G + + M + ++ ++ PT M L + Sbjct: 850 KSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 909 Query: 475 DGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 +GL+L + VFLM+P W+ + E+Q R HR+G + + + ++ ++EE ML Sbjct: 910 KA-GGVGLNLCAASRVFLMDPAWNPAAEDQRFDRCHRLGQKQEVIITKFIVKDSVEENML 968 Query: 295 QLLQDTSACRNMVNKGASGTENEGGARPHRSLHD 194 + +Q+T + + GA GT+ +++ Sbjct: 969 K-IQNT---KRELAAGAFGTKKNANEMKQAKINE 998
>TTF2_HUMAN (Q9UNY4) Transcription termination factor 2 (EC 3.6.1.-) (RNA| polymerase II termination factor) (Transcription release factor 2) (Factor 2) (F2) (HuF2) (Lodestar homolog) Length = 1162 Score = 59.7 bits (143), Expect = 8e-09 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 3/136 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYA---GMYSPMPLGTKRSALTKYKEDPTCMALLMD 473 K +I SQ+ + V+ L G+TYA G +P A + + L+ Sbjct: 1011 KSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLA 1070 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 G +GL+L+ NH+FL++ W+ S+E+Q R +R+G + + + GT+EE++LQ Sbjct: 1071 G--GVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQ 1128 Query: 292 LLQDTSACRNMVNKGA 245 L + V G+ Sbjct: 1129 LQEKKKDLAKQVLSGS 1144
>CHD2_HUMAN (O14647) Chromodomain-helicase-DNA-binding protein 2 (EC 3.6.1.-)| (ATP-dependent helicase CHD2) (CHD-2) Length = 1739 Score = 59.7 bits (143), Expect = 8e-09 Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 8/150 (5%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT---CMALLM 476 ++V+IFSQ + + ++ + LTI + + + ++ AL + D + C LL Sbjct: 808 NRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCF-LLS 866 Query: 475 DGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 LG++L+ + V + + W+ + Q +RAHR+G + +N+ L +GT+EE+++ Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926 Query: 295 Q-----LLQDTSACRNMVNKGASGTENEGG 221 + ++ D + M G + EN G Sbjct: 927 ERAKKKMVLDHLVIQRMDTTGRTILENNSG 956
>YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicase in ATS1-TPD3| intergenic region (EC 3.6.1.-) Length = 1131 Score = 59.3 bits (142), Expect = 1e-08 Identities = 32/133 (24%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 +KV+IFS F + + ++E L+ + + + ++ + K+ ED ++ Sbjct: 967 EKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTK 1026 Query: 466 AA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A G++L N+V + + ++ + Q RAHR+G T+ +N+ TL + +IEE++ QL Sbjct: 1027 AGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQL 1086 Query: 289 LQDTSACRNMVNK 251 ++ A + +++ Sbjct: 1087 AKNKLALDSYISE 1099
>INO80_CANAL (Q59KI4) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1387 Score = 58.9 bits (141), Expect = 1e-08 Identities = 29/130 (22%), Positives = 66/130 (50%), Gaps = 1/130 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +++I+ Q + + E+ L Y + + ++R + ++ +P ++ A Sbjct: 1254 RILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREMVQAWQTNPEIFIFMLSTRA 1313 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LGL+L+ + V + W+ +++ Q + RAHR+G T+ + V L R TIE+++L+ Sbjct: 1314 GGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQVKVFRLVTRNTIEQKILERA 1373 Query: 286 QDTSACRNMV 257 ++ + +V Sbjct: 1374 KEKEEIQKLV 1383
>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)| Length = 1772 Score = 58.9 bits (141), Expect = 1e-08 Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 1/130 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTC-MALLMDGT 467 + +IF+Q + + V+EQ L I G+ Y + + ++ ++ DP + +L + Sbjct: 1487 RALIFTQMTKVLDVLEQFLNIHGLRYMRLDGATKIEQRQLLTERFNTDPKIPVFILSTRS 1546 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ SM++Q R HR+G TR +++ TIE +L+ Sbjct: 1547 GGLGINLTGADTVIFYDSDWNPSMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKA 1606 Query: 286 QDTSACRNMV 257 N+V Sbjct: 1607 NQKQILDNVV 1616
>TTF2_MOUSE (Q5NC05) Transcription termination factor 2 (EC 3.6.1.-) (RNA| polymerase II termination factor) (Transcription release factor 2) Length = 1184 Score = 58.9 bits (141), Expect = 1e-08 Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 1/136 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 K +I SQ+ + V+ L +TYA + + + + + +L+ A Sbjct: 1033 KSVIVSQWTSMLQVVALHLKKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLA 1092 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 +GL+L+ NH+FL++ W+ S+E+Q R +R+G + + + GT+EE++LQL Sbjct: 1093 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQLQ 1152 Query: 286 QDTSACRNMVNKGASG 239 + V G+ G Sbjct: 1153 EKKKDLAKQVLSGSEG 1168
>SWR1_USTMA (Q4P328) Helicase SWR1 (EC 3.6.1.-)| Length = 1830 Score = 58.5 bits (140), Expect = 2e-08 Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 2/139 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG-T 467 +++IF+Q + ++E L G Y + + ++++ ++ D A ++ + Sbjct: 1551 RILIFTQMTRVLDILESFLNYHGYRYLRLDGATKVESRQALTEQFNRDARISAFILSTRS 1610 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ ++E Q + RAHR+G TR +++ TIEE ML+ Sbjct: 1611 GGLGINLTGADTVLFYDLDWNAAIEAQCMDRAHRIGQTRDVHIYRFVTEHTIEENMLRKA 1670 Query: 286 QDTSACRNMV-NKGASGTE 233 N+V +G TE Sbjct: 1671 NQKRLLDNVVIQQGEFNTE 1689
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 58.2 bits (139), Expect = 2e-08 Identities = 35/134 (26%), Positives = 72/134 (53%), Gaps = 8/134 (5%) Frame = -1 Query: 667 RLPQTLP-DKVIIFSQFLEHIHVIEQQLTIA----GITYAGMYSPMPLGTKRSALTKYKE 503 ++ +T P +++I+FSQF + ++E +L + + + + L ++ + Sbjct: 950 QIQETSPGEQIIVFSQFSSFLDILEIELRSHLPRDQVIIYKFDGRLDMKERTRILEQFHD 1009 Query: 502 -DPTCMALLMDG--TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVET 332 D +C+ LL+ T +GL+L+ + F+M+P W ME+Q I R HR+G + + V Sbjct: 1010 KDLSCIKLLLLSLKTGGVGLNLTCASRAFMMDPWWSPGMEDQAIDRIHRIGQQQTVKVVR 1069 Query: 331 LAMRGTIEEQMLQL 290 + ++EE+ML++ Sbjct: 1070 FIIDNSVEEKMLRI 1083
>INO80_ASHGO (Q74Z27) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1414 Score = 58.2 bits (139), Expect = 2e-08 Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 1/139 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+I+ Q + +IE+ LT + + L +R + ++ L+ A Sbjct: 1258 RVLIYFQMTRMMDLIEEYLTYRQYKHIRLDGSSKLEDRRDLVHDWQTKSDIFIFLLSTRA 1317 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +++ Q + RAHR+G T+ + V L ++GTIEE+M Sbjct: 1318 GGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLLIKGTIEERMRDRA 1377 Query: 286 QDTSACRNMVNKGASGTEN 230 + + +V +G + N Sbjct: 1378 KQKEHVQQVVMEGKTKENN 1396
>RAD16_YEAST (P31244) DNA repair protein RAD16 (EC 3.6.1.-) (ATP-dependent| helicase RAD16) Length = 790 Score = 57.4 bits (137), Expect = 4e-08 Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 1/119 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 K I+FSQF + ++E +L AG + M + + + + C L+ A Sbjct: 639 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKA 698 Query: 463 A-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 + L+L + VF+++P W+ S+E Q R HR+G RP+ + + +IE ++++L Sbjct: 699 GGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIEL 757
>HRP3_SCHPO (O14139) Chromodomain helicase hrp3 (EC 3.6.1.-) (ATP-dependent| helicase hrp3) Length = 1388 Score = 57.4 bits (137), Expect = 4e-08 Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 2/119 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYK--EDPTCMALLMDG 470 +V+IFSQ + + ++ L++ G + + +P +R+++ + P + LL Sbjct: 708 RVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTR 767 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L + V + + W+ + Q ++RAHR+G + V L + TIEE +L+ Sbjct: 768 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLE 826
>SWR1_CRYNE (Q5K8T2) Helicase SWR1 (EC 3.6.1.-)| Length = 1246 Score = 57.0 bits (136), Expect = 5e-08 Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 1/130 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG-T 467 +V+IF+Q + ++E L+ G Y + + ++ ++ D + + Sbjct: 956 RVLIFTQMTRVLDILEMFLSHNGHRYLRLDGSTKIEDRQVLTERFNSDSRIFVFIASSRS 1015 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 +G++L+ + VF + W+ SM+ Q + RAHR+G TR +++ T+EE ML+ Sbjct: 1016 GGVGINLTGADTVFFYDSDWNPSMDRQCMDRAHRIGQTREVHIYRFVSSHTVEENMLRKA 1075 Query: 286 QDTSACRNMV 257 + MV Sbjct: 1076 EQKRLLDKMV 1085
>SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)| Length = 1845 Score = 56.6 bits (135), Expect = 7e-08 Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 1/118 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG-T 467 + +IF+Q + + ++EQ L I G Y + + ++ ++ DP + ++ + Sbjct: 1524 RALIFTQMTKVLDILEQFLNIHGHKYLRLDGATKVEQRQILTDRFNHDPRILCFILSTRS 1583 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V + W+ +M++Q R HR+G TR +++ L TIE +L+ Sbjct: 1584 GGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILR 1641
>SWR1_GIBZE (Q4IAK7) Helicase SWR1 (EC 3.6.1.-)| Length = 1691 Score = 56.6 bits (135), Expect = 7e-08 Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 1/118 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG-T 467 + +IF+Q + + ++EQ L I G Y + + ++ ++ DP + ++ + Sbjct: 1389 RALIFTQMTKVLDILEQFLNIHGHKYLRLDGATKVEQRQILTDRFNNDPRILCFILSTRS 1448 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V + W+ +M++Q R HR+G TR +++ L TIE +L+ Sbjct: 1449 GGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILR 1506
>SWR1_ASHGO (Q759G7) Helicase SWR1 (EC 3.6.1.-)| Length = 1486 Score = 56.6 bits (135), Expect = 7e-08 Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 2/139 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG-T 467 + +IF+Q + + ++EQ L G Y + + ++ ++ DP ++ + Sbjct: 1235 RALIFTQMTKVLDILEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDPRITVFILSSRS 1294 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +M++Q R HR+G TR +++ A TIE +L+ Sbjct: 1295 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFASEHTIESNILKKA 1354 Query: 286 QDTSACRNMV-NKGASGTE 233 N+V KG T+ Sbjct: 1355 NQKRQLDNIVIQKGEFTTD 1373
>CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-dependent helicase| CHD1) Length = 1468 Score = 56.6 bits (135), Expect = 7e-08 Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT--CMALLMDG 470 +V+IFSQ + + ++ L+I GI + + +P +R ++ + + + LL Sbjct: 713 RVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTR 772 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L + V + + W+ + Q ++RAHR+G + V L + T+EE++L+ Sbjct: 773 AGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLE 831
>ISWI_DROME (Q24368) Chromatin remodelling complex ATPase chain Iswi (EC| 3.6.1.-) (Protein imitation swi) (Nucleosome remodeling factor 140 kDa subunit) (NURF-140) (CHRAC 140 kDa subunit) Length = 1027 Score = 55.5 bits (132), Expect = 2e-07 Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 2/140 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQ + ++E Y + P + + ++ D + L M T Sbjct: 449 RVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTR 508 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ + V + + W+ M+ Q + RAHR+G + + V L T+EE++++ Sbjct: 509 AGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVER 568 Query: 289 LQDTSACRNMVNKGASGTEN 230 + MV +G +N Sbjct: 569 AEVKLRLDKMVIQGGRLVDN 588
>SWR1_KLULA (Q6CJ38) Helicase SWR1 (EC 3.6.1.-)| Length = 1572 Score = 55.1 bits (131), Expect = 2e-07 Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 4/141 (2%) Frame = -1 Query: 667 RLPQTLPD---KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDP 497 +L Q L D + +IF+Q + + ++EQ L G Y + + ++ ++ DP Sbjct: 1317 QLLQNLKDNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDP 1376 Query: 496 TCMALLMDG-TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMR 320 ++ + LG++L+ + V + W+ +M++Q R HR+G TR +++ Sbjct: 1377 RITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSD 1436 Query: 319 GTIEEQMLQLLQDTSACRNMV 257 TIE +L+ N+V Sbjct: 1437 HTIESNILKKANQKRHLDNVV 1457
>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)| (Protein GYMNOS) Length = 1384 Score = 55.1 bits (131), Expect = 2e-07 Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKY--KEDPTCMALLMDG 470 +V+I++QF + ++E T Y + + ++ + ++ K LL Sbjct: 613 RVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTR 672 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 LG++L+ + V + + W+ + Q ++RAHR+G T + + L RGTIEE+M+QL Sbjct: 673 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQL 732 Query: 289 LQDTSACRNMV 257 + ++V Sbjct: 733 TKKKMVLEHLV 743
>SWR1_CANAL (Q59U81) Helicase SWR1 (EC 3.6.1.-)| Length = 1641 Score = 54.7 bits (130), Expect = 3e-07 Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 1/160 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTC-MALLMDGT 467 + +IF+Q + + ++EQ L I G Y + + ++ K+ DP + +L + Sbjct: 1384 RALIFTQMTKVLDILEQFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRS 1443 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +M++Q R HR+G R +++ TIE +++ Sbjct: 1444 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKA 1503 Query: 286 QDTSACRNMVNKGASGTENEGGARPHRSLHDFAESSYLAK 167 N+V + T + G S+ D S + K Sbjct: 1504 NQKRQLDNVVIQEGEFTTDYFG---KFSVRDLVSDSNIGK 1540
>SWR1_CANGA (Q6FK48) Helicase SWR1 (EC 3.6.1.-)| Length = 1450 Score = 54.3 bits (129), Expect = 3e-07 Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG-T 467 + +IF+Q + + ++EQ L G Y + + ++ ++ DP ++ + Sbjct: 1196 RALIFTQMTKVLDILEQFLNYHGYLYMRLDGATKIEDRQILTERFNSDPKITVFILSSRS 1255 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V + W+ +M++Q R HR+G TR +++ TIE +L+ Sbjct: 1256 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILK 1313
>SWR1_SCHPO (O13682) Helicase swr1 (EC 3.6.1.-)| Length = 1288 Score = 54.3 bits (129), Expect = 3e-07 Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 1/137 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTC-MALLMDGT 467 +V+IF+Q + + ++EQ L I G Y + + ++ ++ D + +L + Sbjct: 1009 RVLIFTQMTKVLDILEQFLNIHGHRYLRLDGATKIEQRQILTERFNNDDKIPVFILSTRS 1068 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ ++ Q R+HR+G TR +++ L T+E ML+ Sbjct: 1069 GGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLRRA 1128 Query: 286 QDTSACRNMVNKGASGT 236 +V +G T Sbjct: 1129 NQKRMLDKIVIQGGEFT 1145
>SMCA5_MOUSE (Q91ZW3) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 5 (EC 3.6.1.-) (Sucrose nonfermenting protein 2 homolog) (mSnf2h) Length = 1051 Score = 53.9 bits (128), Expect = 5e-07 Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQ + ++E Y + P ++ ++ Y E + + M T Sbjct: 500 RVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTR 559 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 A LG++L+ + V L + W+ ++ Q + RAHR+G T+ + V T+EE++++ Sbjct: 560 AGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVE 618
>SWR1_EMENI (Q5ARK3) Helicase swr1 (EC 3.6.1.-)| Length = 1656 Score = 53.9 bits (128), Expect = 5e-07 Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 1/118 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG-T 467 + +IF+Q + + V+EQ L I G Y + + ++ ++ D +A ++ + Sbjct: 1349 RALIFTQMTKMLDVLEQFLNIHGHRYLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRS 1408 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V + W+ +M++Q R HR+G TR +++ TIE +L+ Sbjct: 1409 GGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILR 1466
>SMCA5_HUMAN (O60264) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 5 (EC 3.6.1.-) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2 Length = 1052 Score = 53.9 bits (128), Expect = 5e-07 Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQ + ++E Y + P ++ ++ Y E + + M T Sbjct: 501 RVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTR 560 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 A LG++L+ + V L + W+ ++ Q + RAHR+G T+ + V T+EE++++ Sbjct: 561 AGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVE 619
>CHD3_DROME (O16102) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)| (ATP-dependent helicase Chd3) Length = 892 Score = 53.1 bits (126), Expect = 8e-07 Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTC---MALLMD 473 +V++FSQ + ++V+E L G Y + + ++ A+ ++ DP + LL Sbjct: 604 RVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFN-DPVSEHFVFLLST 662 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V + + W+ + Q SRAHRMG + + + ++EE+++Q Sbjct: 663 RAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQ 722 Query: 292 LLQDTSACRNMVNKGASG 239 + + ++V + G Sbjct: 723 VAKHKMMLTHLVVRPGMG 740
>CHD5_HUMAN (Q8TDI0) Chromodomain helicase-DNA-binding protein 5 (EC 3.6.1.-)| (ATP-dependent helicase CHD5) (CHD-5) Length = 1954 Score = 53.1 bits (126), Expect = 8e-07 Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 2/152 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQ + + ++E L G Y + + G ++ A+ ++ + T Sbjct: 1042 RVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTR 1101 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ + V + + W+ + Q SRAHR+G + + + R ++EE++ Q+ Sbjct: 1102 AGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQV 1161 Query: 289 LQDTSACRNMVNKGASGTENEGGARPHRSLHD 194 + ++V + G+++ G+ + L D Sbjct: 1162 AKRKMMLTHLVVRPGLGSKS--GSMTKQELDD 1191
>Y018_MYCGE (P47264) Hypothetical ATP-dependent helicase MG018 (EC 3.6.1.-)| Length = 1031 Score = 53.1 bits (126), Expect = 8e-07 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE-DPTCMALLMDGT 467 KVI+F+QFL+ I +Q L I + + + + + K+ C+ L Sbjct: 881 KVILFTQFLDVIDCFKQTLKNQKIDHLVFDGRKTVKNRNTIIQKFNSAKEPCVMLASLKA 940 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 +G++L+ V + W+ ++E Q RAHR+G ++ + V + + TIEE++ Q+ Sbjct: 941 GGVGINLTAAEVVIHFDVWWNSAVENQATDRAHRIGQSKTVQVYRIIAKNTIEERVCQV 999
>SWR1_ASPFU (Q4WAS9) Helicase swr1 (EC 3.6.1.-)| Length = 1695 Score = 52.8 bits (125), Expect = 1e-06 Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 1/118 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG-T 467 + +IF+Q + + ++EQ L I G Y + + ++ ++ D + ++ + Sbjct: 1396 RALIFTQMTKMLDILEQFLNIHGHRYLRLDGTTKVEQRQILTDRFNNDDRILVFILSSRS 1455 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V + W+ +M++Q R HR+G TR +++ TIE +L+ Sbjct: 1456 GGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILR 1513
>SWR1_DEBHA (Q6BKC2) Helicase SWR1 (EC 3.6.1.-)| Length = 1616 Score = 52.8 bits (125), Expect = 1e-06 Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 1/154 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTC-MALLMDGT 467 + +IF+Q + + ++EQ L I G Y + + ++ K+ D + +L + Sbjct: 1350 RALIFTQMTKVLDILEQFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDSKIPVFILSTRS 1409 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +M++Q R HR+G +R +++ TIE +L+ Sbjct: 1410 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQSRDVHIYRFVSEYTIESNILRKA 1469 Query: 286 QDTSACRNMVNKGASGTENEGGARPHRSLHDFAE 185 N+V + T + G + L + AE Sbjct: 1470 NQKRQLDNVVIQEGEFTTDYFGKFSVKDLVNDAE 1503
>RAD5_DEBHA (Q6BIP2) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1153 Score = 52.8 bits (125), Expect = 1e-06 Identities = 32/126 (25%), Positives = 65/126 (51%), Gaps = 7/126 (5%) Frame = -1 Query: 658 QTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYS---PMPLGTKRSALTKYK----ED 500 Q+ ++V++FSQF ++ +IE +L I + +Y + + ++ L + E+ Sbjct: 1028 QSPNEQVVVFSQFSSYLDIIENELKIQILNDFVVYKFDGRLNMNERQKILENFSSQKHEN 1087 Query: 499 PTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMR 320 + LL +GL+L+ + F+M+ W S+E+Q I R +R+G + V+ M Sbjct: 1088 KVMILLLSLKAGGVGLNLTTASRAFMMDKWWSPSVEDQEIDRLNRIGKNMNVKVKRFIMD 1147 Query: 319 GTIEEQ 302 +IE++ Sbjct: 1148 DSIEKR 1153
>YQHH_BACSU (P54509) Hypothetical ATP-dependent helicase yqhH (EC 3.6.1.-)| Length = 557 Score = 52.4 bits (124), Expect = 1e-06 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 5/133 (3%) Frame = -1 Query: 664 LPQTLPDKVIIFSQFLE---HIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE--D 500 L + + DKVIIF+++ ++ QQ I+ + + G G KR K+ Sbjct: 367 LIKKIDDKVIIFTEYRATQIYLQWFLQQNGISSVPFRG-------GFKRGKKDWMKDLFR 419 Query: 499 PTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMR 320 L+ G++L F NH+ + W+ EQ I R HR+G R +++ +A + Sbjct: 420 GKIQVLIATEAGGEGINLQFCNHMINYDLPWNPMRLEQRIGRIHRLGQERDVHIYNMATK 479 Query: 319 GTIEEQMLQLLQD 281 T+EE +L+LL + Sbjct: 480 HTVEEHILKLLYE 492
>RAD26_YEAST (P40352) DNA repair and recombination protein RAD26 (EC 3.6.1.-)| (ATP-dependent helicase RAD26) Length = 1085 Score = 52.0 bits (123), Expect = 2e-06 Identities = 27/120 (22%), Positives = 64/120 (53%), Gaps = 5/120 (4%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLT-----IAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALL 479 K ++F+Q + + ++E+ ++ ++ + Y M + ++S + ++ + + LL Sbjct: 669 KALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLL 728 Query: 478 MDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM 299 LG++L+ N + + +P W+ S + Q RA R+G R +++ L + G+IEE++ Sbjct: 729 TTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKI 788
>SWR1_YEAST (Q05471) Helicase SWR1 (EC 3.6.1.-) (Swi2/Snf2-related 1)| Length = 1514 Score = 52.0 bits (123), Expect = 2e-06 Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 1/130 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDG-T 467 + +IF+Q + + V+EQ L G Y + + ++ ++ D ++ + Sbjct: 1264 RALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRS 1323 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 LG++L+ + V + W+ +M++Q R HR+G TR +++ TIE +L+ Sbjct: 1324 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKA 1383 Query: 286 QDTSACRNMV 257 N+V Sbjct: 1384 NQKRQLDNVV 1393
>Y020_MYCPN (P75093) Hypothetical ATP-dependent helicase MPN020 (EC 3.6.1.-)| (D12_orf1030) Length = 1030 Score = 51.6 bits (122), Expect = 2e-06 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYA---GMYSPMPLGTKRSALTKYKEDPT-CMALLM 476 K+I+F+QF++ I + GI Y G SP ++ S + K+ C+ L Sbjct: 880 KIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPK---SRHSIIEKFNNAKNPCVLLAS 936 Query: 475 DGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 +G++L+ V + W+ ++E Q RAHR+G + + V + + TIEE++ Sbjct: 937 LKAGGVGINLTAAEVVIHFDVWWNTAVENQATDRAHRIGQKKTVQVYRIIAKNTIEERVC 996 Query: 295 QL 290 Q+ Sbjct: 997 QV 998
>SMRCD_MOUSE (Q04692) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A containing DEAD/H box 1 (EC 3.6.1.-) (ATP-dependent helicase SMARCAD1) (Enhancer trap locus homolog 1) (Etl-1) Length = 1021 Score = 51.6 bits (122), Expect = 2e-06 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 1/122 (0%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 D+V++FSQF + ++E L Y + + + + ++ D L+ Sbjct: 866 DRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTK 925 Query: 466 AA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ N V L + + ++Q R HR+G T+ + V L +GTIEE ML++ Sbjct: 926 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKI 985 Query: 289 LQ 284 Q Sbjct: 986 NQ 987
>SMRCD_HUMAN (Q9H4L7) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A containing DEAD/H box 1 (EC 3.6.1.-) (ATP-dependent helicase 1) (hHEL1) Length = 1026 Score = 51.6 bits (122), Expect = 2e-06 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 1/122 (0%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 D+V++FSQF + ++E L Y + + + + ++ D L+ Sbjct: 871 DRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTK 930 Query: 466 AA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ N V L + + ++Q R HR+G T+ + V L +GTIEE ML++ Sbjct: 931 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKI 990 Query: 289 LQ 284 Q Sbjct: 991 NQ 992
>CHD3_CAEEL (Q22516) Chromodomain helicase-DNA-binding protein 3 homolog (CHD-3)| Length = 1787 Score = 50.8 bits (120), Expect = 4e-06 Identities = 29/140 (20%), Positives = 66/140 (47%), Gaps = 2/140 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQ + ++E + G Y + + ++ A+ +Y + + T Sbjct: 958 RVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTR 1017 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ + V + + W+ + Q SRAHR+G + + +G++EE++ + Sbjct: 1018 AGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSV 1077 Query: 289 LQDTSACRNMVNKGASGTEN 230 + ++V + G ++ Sbjct: 1078 AKKKMLLTHLVVRAGLGAKD 1097
>CHD1_HUMAN (O14646) Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-)| (ATP-dependent helicase CHD1) (CHD-1) Length = 1709 Score = 50.4 bits (119), Expect = 5e-06 Identities = 28/121 (23%), Positives = 62/121 (51%), Gaps = 3/121 (2%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT---CMALLM 476 ++V+IFSQ + + ++ + L + + + ++ AL + + + C LL Sbjct: 805 NRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCF-LLS 863 Query: 475 DGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 LG++L+ + V + + W+ + Q +RAHR+G + +N+ L +G++EE +L Sbjct: 864 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDIL 923 Query: 295 Q 293 + Sbjct: 924 E 924
>CHD1_MOUSE (P40201) Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-)| (ATP-dependent helicase CHD1) (CHD-1) Length = 1711 Score = 50.4 bits (119), Expect = 5e-06 Identities = 28/121 (23%), Positives = 62/121 (51%), Gaps = 3/121 (2%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT---CMALLM 476 ++V+IFSQ + + ++ + L + + + ++ AL + + + C LL Sbjct: 803 NRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCF-LLS 861 Query: 475 DGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 LG++L+ + V + + W+ + Q +RAHR+G + +N+ L +G++EE +L Sbjct: 862 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDIL 921 Query: 295 Q 293 + Sbjct: 922 E 922
>RAD54_MOUSE (P70270) DNA repair and recombination protein RAD54-like (EC| 3.6.1.-) (RAD54 homolog) (mRAD54) (mHR54) Length = 747 Score = 50.1 bits (118), Expect = 7e-06 Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 2/156 (1%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE--DPTCMALLMD 473 DKV++ S + + + + E+ + Y + M + + + ++ P + +L Sbjct: 514 DKVVLVSNYTQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSS 573 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 GL+L N + + +P W+ + +EQ ++R R G + + L GTIEE++ Q Sbjct: 574 KAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQ 633 Query: 292 LLQDTSACRNMVNKGASGTENEGGARPHRSLHDFAE 185 A + V + E H SL + E Sbjct: 634 RQSHKKALSSCV------VDEEQDVERHFSLGELKE 663
>CHD4_MOUSE (Q6PDQ2) Chromodomain helicase-DNA-binding protein 4 (CHD-4)| Length = 1915 Score = 50.1 bits (118), Expect = 7e-06 Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 2/152 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQ + + ++E L G Y + + ++ A+ ++ + T Sbjct: 1061 RVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTR 1120 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ + V + + W+ + Q SRAHR+G + + + R ++EE++ Q+ Sbjct: 1121 AGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQV 1180 Query: 289 LQDTSACRNMVNKGASGTENEGGARPHRSLHD 194 + ++V + G++ G+ + L D Sbjct: 1181 AKKKMMLTHLVVRPGLGSKT--GSMSKQELDD 1210
>RAD54_CHICK (O12944) DNA repair and recombination protein RAD54-like (EC 3.6.1.-)| (RAD54 homolog) (Putative recombination factor GdRad54) (Fragment) Length = 733 Score = 50.1 bits (118), Expect = 7e-06 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 2/191 (1%) Frame = -1 Query: 655 TLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE--DPTCMAL 482 T DKV++ S + + + + E+ Y + M + + + ++ P + + Sbjct: 500 TSNDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKVVERFNSPSSPEFIFM 559 Query: 481 LMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQ 302 L GL+L N + + +P W+ + +EQ ++R R G + + L GTIEE+ Sbjct: 560 LSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEK 619 Query: 301 MLQLLQDTSACRNMVNKGASGTENEGGARPHRSLHDFAESSYLAKLTFVKGSNTTTCMDA 122 + Q A + V + E H SL + E L N TT D Sbjct: 620 IFQRQTHKKALSSCV------VDEEQDVERHFSLGELKELFSL---------NETTISDT 664 Query: 121 C*C*YKLKCRQ 89 K+KCR+ Sbjct: 665 H---DKIKCRR 672
>CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4 (EC 3.6.1.-)| (ATP-dependent helicase CHD4) (CHD-4) (Mi-2 autoantigen 218 kDa protein) (Mi2-beta) Length = 1912 Score = 50.1 bits (118), Expect = 7e-06 Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 2/152 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQ + + ++E L G Y + + ++ A+ ++ + T Sbjct: 1068 RVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTR 1127 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ + V + + W+ + Q SRAHR+G + + + R ++EE++ Q+ Sbjct: 1128 AGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQV 1187 Query: 289 LQDTSACRNMVNKGASGTENEGGARPHRSLHD 194 + ++V + G++ G+ + L D Sbjct: 1188 AKKKMMLTHLVVRPGLGSKT--GSMSKQELDD 1217
>RDH54_SCHPO (Q09772) Meiotic recombination protein rdh54 (EC 3.6.1.-)| (ATP-dependent helicase rdh54) (RAD54 protein homolog 2) Length = 811 Score = 50.1 bits (118), Expect = 7e-06 Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 3/118 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT---CMALLMD 473 K +I SQ+ E + +IE L+I + + + P + + + + LL Sbjct: 550 KAVIVSQYKETLELIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSS 609 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM 299 GL+L+ + + EP W+ + + Q +SR +R G RP+ + T G ++E++ Sbjct: 610 KAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDERI 667
>CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)| (ATP-dependent helicase CHD3) (CHD-3) (Mi-2 autoantigen 240 kDa protein) (Mi2-alpha) (Zinc-finger helicase) (hZFH) Length = 2000 Score = 50.1 bits (118), Expect = 7e-06 Identities = 33/152 (21%), Positives = 71/152 (46%), Gaps = 2/152 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQ + + ++E L G Y + + ++ A+ ++ + T Sbjct: 1078 RVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTR 1137 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ + V + + W+ + Q SRAHR+G + + R ++EE++ Q+ Sbjct: 1138 AGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQV 1197 Query: 289 LQDTSACRNMVNKGASGTENEGGARPHRSLHD 194 + ++V + G ++ G+ + L D Sbjct: 1198 AKRKMMLTHLVVR--PGLGSKAGSMSKQELDD 1227
>YFK8_YEAST (P43610) Hypothetical ATP-dependent helicase YFR038W (EC 3.6.1.-)| Length = 853 Score = 50.1 bits (118), Expect = 7e-06 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYK--EDPTCMALLMDG 470 KV+I+SQF+ + +IE + + + T++ L K+ +D + LL Sbjct: 621 KVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTR 680 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 A LG++L + V L + W+ ++ Q + R HR+G P+ V L TIE +L Sbjct: 681 AAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVIL 738
>RAD54_HUMAN (Q92698) DNA repair and recombination protein RAD54-like (EC| 3.6.1.-) (RAD54 homolog) (hRAD54) (hHR54) Length = 747 Score = 49.3 bits (116), Expect = 1e-05 Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 2/156 (1%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE--DPTCMALLMD 473 DKV++ S + + + + E+ Y + M + + + ++ P + +L Sbjct: 514 DKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSS 573 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 GL+L N + + +P W+ + +EQ ++R R G + + L GTIEE++ Q Sbjct: 574 KAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQ 633 Query: 292 LLQDTSACRNMVNKGASGTENEGGARPHRSLHDFAE 185 A + V + E H SL + E Sbjct: 634 RQSHKKALSSCV------VDEEQDVERHFSLGELKE 663
>SMCA1_HUMAN (P28370) Probable global transcription activator SNF2L1 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA1) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1) Length = 976 Score = 48.9 bits (115), Expect = 1e-05 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 15/132 (11%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMP-------------LGTKRSALTKYKE 503 +V+IFSQ + ++E G Y + P LG +R A+ + Sbjct: 426 RVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLG-QREAIEAFNA 484 Query: 502 DPTCMALLMDGTAA--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETL 329 + + M T A LG++L+ + V L + W+ ++ Q + RAHR+G +P+ V L Sbjct: 485 PNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRL 544 Query: 328 AMRGTIEEQMLQ 293 T+EE++++ Sbjct: 545 ITDNTVEERIVE 556
>RAD54_YEAST (P32863) DNA repair and recombination protein RAD54 (EC 3.6.1.-)| Length = 898 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 2/120 (1%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYK--EDPTCMALLMD 473 DK+++ S + + + +IE+ + + M + ++ + ++ E + LL Sbjct: 673 DKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSS 732 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 G++L N + LM+P W+ + ++Q ++R R G + + GTIEE++ Q Sbjct: 733 KAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQ 792
>ISW1_CAEEL (P41877) Chromatin remodelling complex ATPase chain isw-1 (EC| 3.6.1.-) Length = 1009 Score = 48.5 bits (114), Expect = 2e-05 Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 2/131 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQF + ++E Y + P + +A+ Y + + M T Sbjct: 453 RVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTR 512 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ + V + + W+ + Q + RAHR+G + + V L T++E++++ Sbjct: 513 AGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEK 572 Query: 289 LQDTSACRNMV 257 + N+V Sbjct: 573 AEAKLRLDNIV 583
>ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked nuclear protein) (Heterochromatin protein 2) (HP1 alpha-interacting protein) (HP1-BP38 protein) Length = 2476 Score = 48.5 bits (114), Expect = 2e-05 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 25/148 (16%) Frame = -1 Query: 667 RLPQTLPDKVIIFSQFLEHIHVIEQQLTIAG----------ITYAGM--------YSPMP 542 R+ + + DKV++FSQ L + +IE L +A + Y G Y + Sbjct: 2011 RMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKEKPLIYKGEGKWIRNIDYYRLD 2070 Query: 541 LGTKRSALTKYKE---DPTCMA----LLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQV 383 T + K+ E D T + ++ +LG++L N V + + W+ S + Q Sbjct: 2071 GSTNAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS 2130 Query: 382 ISRAHRMGATRPINVETLAMRGTIEEQM 299 I R +R G T+P+ V +GT+E+++ Sbjct: 2131 IFRVYRFGQTKPVYVYRFLAQGTMEDKI 2158
>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 48.1 bits (113), Expect = 3e-05 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 25/148 (16%) Frame = -1 Query: 667 RLPQTLPDKVIIFSQFLEHIHVIEQQLTIAG----------ITYAGM--------YSPMP 542 R+ + + DKV++FSQ L + +IE L +A + Y G Y + Sbjct: 2028 RMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLD 2087 Query: 541 LGTKRSALTKYKE---DPT----CMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQV 383 T + K+ E D T + ++ +LG++L N V + + W+ S + Q Sbjct: 2088 GSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS 2147 Query: 382 ISRAHRMGATRPINVETLAMRGTIEEQM 299 I R +R G T+P+ V +GT+E+++ Sbjct: 2148 IFRVYRFGQTKPVYVYRFLAQGTMEDKI 2175
>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 48.1 bits (113), Expect = 3e-05 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 25/148 (16%) Frame = -1 Query: 667 RLPQTLPDKVIIFSQFLEHIHVIEQQLTIAG----------ITYAGM--------YSPMP 542 R+ + + DKV++FSQ L + +IE L +A + Y G Y + Sbjct: 2028 RMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLD 2087 Query: 541 LGTKRSALTKYKE---DPT----CMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQV 383 T + K+ E D T + ++ +LG++L N V + + W+ S + Q Sbjct: 2088 GSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS 2147 Query: 382 ISRAHRMGATRPINVETLAMRGTIEEQM 299 I R +R G T+P+ V +GT+E+++ Sbjct: 2148 IFRVYRFGQTKPVYVYRFLAQGTMEDKI 2175
>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX) Length = 2492 Score = 48.1 bits (113), Expect = 3e-05 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 25/148 (16%) Frame = -1 Query: 667 RLPQTLPDKVIIFSQFLEHIHVIEQQLTIAG----------ITYAGM--------YSPMP 542 R+ + + DKV++FSQ L + +IE L +A + Y G Y + Sbjct: 2028 RMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLD 2087 Query: 541 LGTKRSALTKYKE---DPT----CMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQV 383 T + K+ E D T + ++ +LG++L N V + + W+ S + Q Sbjct: 2088 GSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS 2147 Query: 382 ISRAHRMGATRPINVETLAMRGTIEEQM 299 I R +R G T+P+ V +GT+E+++ Sbjct: 2148 IFRVYRFGQTKPVYVYRFLAQGTMEDKI 2175
>GTA_NPVOP (O10302) Probable global transactivator (EC 3.6.1.-) (ATP-dependent| helicase GTA) Length = 498 Score = 48.1 bits (113), Expect = 3e-05 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Frame = -1 Query: 667 RLPQTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKY---KEDP 497 R+ T DKV++ SQ++E + ++ L G+ +Y+ +R+A+ + P Sbjct: 341 RVLDTPDDKVVLVSQWVEFLQLVAGLLRRRGVPIL-LYTGQLRVEERTAVENQFNAADSP 399 Query: 496 TCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMG 359 + L+ +GL+L+ NH+ ++EP W+ +E Q R HRMG Sbjct: 400 YRVLLMSIKCGGVGLNLTGGNHIIMLEPHWNPQIELQAQDRIHRMG 445
>TTF2_DROME (P34739) Transcription termination factor 2 (EC 3.6.1.-) (RNA| polymerase II termination factor) (Transcription release factor 2) (Protein lodestar) Length = 1061 Score = 48.1 bits (113), Expect = 3e-05 Identities = 31/133 (23%), Positives = 68/133 (51%), Gaps = 2/133 (1%) Frame = -1 Query: 673 QTRLPQTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE-DP 497 +T + ++ DK I+ SQ+ + ++ L+ G+ + +P+ ++ + ++ + + Sbjct: 900 KTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNN 959 Query: 496 TCMALLMDGTAA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMR 320 LL+ TA +GL+L NH+ L++ W+ +E Q R +R+G + + + Sbjct: 960 QKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCV 1019 Query: 319 GTIEEQMLQLLQD 281 T+ EQ ++ LQD Sbjct: 1020 DTV-EQRIKGLQD 1031
>RAD54_SCHPO (P41410) DNA repair protein rhp54 (EC 3.6.1.-) (RAD54 homolog 1)| Length = 852 Score = 48.1 bits (113), Expect = 3e-05 Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 3/182 (1%) Frame = -1 Query: 667 RLPQTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCM 488 ++ Q DK+++ S + + + EQ G + M + KR L DP Sbjct: 621 QIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVN-KRQRLVDTFNDPEKD 679 Query: 487 A---LLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRG 317 A LL G++L N + L +P W+ + ++Q ++R R G + V G Sbjct: 680 AFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATG 739 Query: 316 TIEEQMLQLLQDTSACRNMVNKGASGTENEGGARPHRSLHDFAESSYLAKLTFVKGSNTT 137 TIEE++ Q + + V A E H SL + + L T + T Sbjct: 740 TIEEKIFQRQSHKQSLSSCVVDEAQDVER------HFSLDNLRQLFQLNDHTVCETHETY 793 Query: 136 TC 131 C Sbjct: 794 KC 795
>CHDM_DROME (O97159) Chromodomain helicase-DNA-binding protein Mi-2 homolog (EC| 3.6.1.-) (ATP-dependent helicase Mi-2) (dMi-2) Length = 1982 Score = 47.4 bits (111), Expect = 4e-05 Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 8/147 (5%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V+IFSQ + + ++E L Y + + ++ A+ ++ + + T Sbjct: 1070 RVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTR 1129 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LG++L+ + V + + W+ + Q SRAHR+G + + R ++EE++ Q+ Sbjct: 1130 AGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQV 1189 Query: 289 LQDTSACRNMV------NKGASGTENE 227 + ++V KGA+ T+ E Sbjct: 1190 AKRKMMLTHLVVRPGMGGKGANFTKQE 1216
>GTA_NPVAC (P41447) Probable global transactivator (EC 3.6.1.-) (ATP-dependent| helicase GTA) Length = 506 Score = 47.4 bits (111), Expect = 4e-05 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 3/105 (2%) Frame = -1 Query: 655 TLPDKVIIFSQFLEHIHVIE---QQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMA 485 T DK+I+ SQ++E++ + E +Q IA + Y G + + Sbjct: 352 TSNDKIILVSQWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAETTFNDAANTQHRIL 411 Query: 484 LLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATR 350 LL +GL+L NH+ ++EP W+ +E Q R RMG T+ Sbjct: 412 LLSIKCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTK 456
>CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 (EC 3.6.1.-)| (ATP-dependent helicase CHD6) (CHD-6) (Radiation-induced gene B protein) Length = 2715 Score = 47.4 bits (111), Expect = 4e-05 Identities = 32/141 (22%), Positives = 68/141 (48%), Gaps = 7/141 (4%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKY--KEDPTCMALLMDG 470 KV+IFSQ + + ++E L TY + + +++A+ ++ + + LL Sbjct: 801 KVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTR 860 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM--- 299 LG++L+ + + + W+ + Q +R HR+G ++ + V L R + E +M Sbjct: 861 AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDK 920 Query: 298 --LQLLQDTSACRNMVNKGAS 242 L+L D + +++ KG + Sbjct: 921 ASLKLGLDKAVLQDINRKGGT 941
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase xnp-1) (X-linked nuclear protein 1) Length = 1359 Score = 46.6 bits (109), Expect = 7e-05 Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 31/162 (19%) Frame = -1 Query: 658 QTLPDKVIIFSQFLEHIHVIEQQLT--------------------------IAGITYAGM 557 + + DK+++FSQ LE + +I++ L + G Y + Sbjct: 960 EEIGDKLLVFSQSLESLTLIKRMLEYMAGTGQWFADGHEALNAEGEETWSWLEGEDYMTI 1019 Query: 556 YSPMPLGTKRSALTKYKEDPTCMALLM---DGTAALGLDLSFVNHVFLMEPIWDRSMEEQ 386 + G + + T + + A LM +LG ++ N V + + W+ S + Q Sbjct: 1020 DGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVAANRVIIFDACWNPSHDTQ 1079 Query: 385 VISRAHRMGATRPINVETLAMRGTIEEQML--QLLQDTSACR 266 + R +R G T+P+ + +GT+EE++ Q+ +++++ R Sbjct: 1080 SLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMR 1121
>YFC1_SCHPO (O42861) Probable ATP-dependent helicase C25A8.01c in chromosome I| (EC 3.6.1.-) Length = 922 Score = 46.6 bits (109), Expect = 7e-05 Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 1/141 (0%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 D+V++FSQF + + +++ + + + + ++ + ++ D + L+ Sbjct: 778 DRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTK 837 Query: 466 AA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A G++L+ N V L + ++ + Q RAHR+G + + V ++ TIEE + +L Sbjct: 838 AGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRL 897 Query: 289 LQDTSACRNMVNKGASGTENE 227 A ++ A E E Sbjct: 898 ANAKIALDATLSGNAETVEAE 918
>SNF22_SCHPO (O94421) SNF2-family ATP dependent chromatin remodeling factor snf22| (EC 3.6.1.-) (ATP-dependent helicase snf22) Length = 1680 Score = 45.8 bits (107), Expect = 1e-04 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 2/122 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 K ++F Q + + ++E L Y + + S L ++ + + + + M T Sbjct: 1205 KTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTR 1264 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A LGL+L + V + + W+ + Q RAHR+G T+ + + L +IEE +L Sbjct: 1265 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSR 1324 Query: 289 LQ 284 Q Sbjct: 1325 AQ 1326
>ISW2_ARATH (Q8RWY3) Putative chromatin remodelling complex ATPase chain (EC| 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) Length = 1057 Score = 45.8 bits (107), Expect = 1e-04 Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 2/119 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT--CMALLMDG 470 +V+IFSQ + ++E L G Y + + +++ Y + + + LL Sbjct: 508 RVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTR 567 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V L + W+ ++ Q RAHR+G + + V IEE++++ Sbjct: 568 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIE 626
>CHD9_HUMAN (Q3L8U1) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)| (ATP-dependent helicase CHD9) (CHD-9) (Chromatin-related mesenchymal modulator) (CReMM) (Chromatin remodeling factor CHROM1) (Peroxisomal proliferator-activated receptor A-inter Length = 2897 Score = 45.8 bits (107), Expect = 1e-04 Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 2/143 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT--CMALLMDG 470 KV+IFSQ + + ++E L Y + + +++A+ ++ + + + LL Sbjct: 1200 KVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR 1259 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 LG++L+ + + + W+ + Q +R HR+G + + V L R + E +M Sbjct: 1260 AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDR 1319 Query: 289 LQDTSACRNMVNKGASGTENEGG 221 V + SG E+ G Sbjct: 1320 ASLKLGLDKAVLQSMSGRESNVG 1342
>SNF21_SCHPO (Q9UTN6) SNF2-family ATP dependent chromatin remodeling factor snf21| (EC 3.6.1.-) (ATP-dependent helicase snf21) Length = 1199 Score = 45.1 bits (105), Expect = 2e-04 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 3/123 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTC---MALLMD 473 ++++F Q + ++++E L Y + RS L DPT + LL Sbjct: 754 RILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTK-ADDRSKLLGVFNDPTAEVNLFLLST 812 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LGL+L + V + + W+ + Q RAHR+G T+ + + L ++EE +L Sbjct: 813 RAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILA 872 Query: 292 LLQ 284 Q Sbjct: 873 RAQ 875
>CHD7_HUMAN (Q9P2D1) Chromodomain-helicase-DNA-binding protein 7 (EC 3.6.1.-)| (ATP-dependent helicase CHD7) (CHD-7) (Fragment) Length = 2235 Score = 45.1 bits (105), Expect = 2e-04 Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 2/140 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT--CMALLMDG 470 +V+IFSQ + + ++E L Y + + +++A+ ++ + + + LL Sbjct: 546 RVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR 605 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 LG++L+ + + + W+ + Q +R HR+G ++ + + L R + E +M Sbjct: 606 AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDK 665 Query: 289 LQDTSACRNMVNKGASGTEN 230 V + SG EN Sbjct: 666 ASLKLGLDKAVLQSMSGREN 685
>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase XNP) (X-linked nuclear protein) (dXNP) (d-xnp) Length = 1311 Score = 45.1 bits (105), Expect = 2e-04 Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 25/147 (17%) Frame = -1 Query: 658 QTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE----DPTC 491 + + DK+++FSQ L+ + VIE L++ +G + T K+ D +C Sbjct: 911 EAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSC 970 Query: 490 ---------------------MALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISR 374 + L+ LG++L N V + + W+ S + Q I R Sbjct: 971 SVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFR 1030 Query: 373 AHRMGATRPINVETLAMRGTIEEQMLQ 293 +R G +P + L GT+E+++ + Sbjct: 1031 VYRFGQIKPCYIYRLIAMGTMEQKVYE 1057
>ISW1_YEAST (P38144) Chromatin remodelling complex ATPase chain ISW1 (EC| 3.6.1.-) Length = 1129 Score = 44.7 bits (104), Expect = 3e-04 Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 2/119 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYK--EDPTCMALLMDG 470 +V+IFSQ + ++E Y + + A+ Y + + LL Sbjct: 520 RVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTR 579 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V L + W+ + Q + RAHR+G + + V L ++EE++L+ Sbjct: 580 AGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 638
>ISW2_ORYSA (Q7G8Y3) Putative chromatin remodelling complex ATPase chain (EC| 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) Length = 1107 Score = 43.9 bits (102), Expect = 5e-04 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTC---MALLMD 473 +V+IFSQ + ++E L G Y + G R A + P + LL Sbjct: 550 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTG-GEDRDASIEAFNKPGSEKFVFLLST 608 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LG++L+ + V L + W+ + Q RAHR+G + + V TIEE++++ Sbjct: 609 RAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIE 668
>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)| (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal proliferator-activated receptor A-interacting complex 320 kDa protein) (PPAR-alpha-interacting complex protein 320 kDa) Length = 2885 Score = 43.9 bits (102), Expect = 5e-04 Identities = 26/117 (22%), Positives = 56/117 (47%), Gaps = 2/117 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT--CMALLMDG 470 KV+IFSQ + + ++E L Y + + +++A+ ++ + + + LL Sbjct: 1199 KVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR 1258 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM 299 LG++L+ + + + W+ + Q +R HR+G + + V L R + E +M Sbjct: 1259 AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREM 1315
>CHD8_HUMAN (Q9HCK8) Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-)| (ATP-dependent helicase CHD8) (CHD-8) (Helicase with SNF2 domain 1) Length = 2302 Score = 43.9 bits (102), Expect = 5e-04 Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 2/117 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT--CMALLMDG 470 KV+IFSQ + + ++E L Y + + +++A+ ++ + + + LL Sbjct: 872 KVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR 931 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQM 299 LG++L+ + + + W+ + Q +R HR+G ++ + V L R + E +M Sbjct: 932 AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 988
>SMAL1_MOUSE (Q8BJL0) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A-like protein 1 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 1) (HepA-related protein) (mharp) Length = 910 Score = 42.7 bits (99), Expect = 0.001 Identities = 25/123 (20%), Positives = 56/123 (45%), Gaps = 1/123 (0%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 +K ++F+ + + ++L + + + P + + +++ L+ T Sbjct: 684 EKFLVFAHHKVILDAVAKELERKNVQHIRIDGSTPSADREAQCQRFQLSKGHTVALLSIT 743 Query: 466 AA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 AA +GL S + V E W+ + Q R HR+G T +++ L +GT ++ + L Sbjct: 744 AANMGLTFSTADLVVFAELFWNPGVLIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPL 803 Query: 289 LQD 281 +Q+ Sbjct: 804 IQE 806
>SMCA2_HUMAN (P51531) Probable global transcription activator SNF2L2 (EC 3.6.1.-)| (ATP-dependent helicase SMARCA2) (SNF2-alpha) (SWI/SNF-related matrix associated actin dependent regulator of chromatin subfamily A member 2) (hBRM) Length = 1586 Score = 42.4 bits (98), Expect = 0.001 Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 +V++F Q + ++E Y + + + L K+ E + + + T Sbjct: 1064 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1123 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 A LGL+L + V + + W+ + Q RAHR+G + V L ++EE++L Sbjct: 1124 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKIL 1181
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC 3.6.1.-)| (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 42.4 bits (98), Expect = 0.001 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 2/118 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGTA 464 KV++F Q + ++E G Y + + L + E + + + T Sbjct: 1098 KVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTR 1157 Query: 463 A--LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 A LGL+L + V + + W+ + Q RAHR+G + V L ++EE++L Sbjct: 1158 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKIL 1215
>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent helicase| brm) (Protein brahma) Length = 1638 Score = 41.2 bits (95), Expect = 0.003 Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 2/118 (1%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKY--KEDPTCMALLMDG 470 +V++F Q + + +IE L Y + + L K+ K + LL Sbjct: 1116 RVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTR 1175 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQML 296 LGL+L + V + + W+ + Q RAHR+G + V L ++EE++L Sbjct: 1176 AGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERIL 1233
>DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 585 Score = 40.4 bits (93), Expect = 0.005 Identities = 29/102 (28%), Positives = 52/102 (50%) Frame = -1 Query: 658 QTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALL 479 Q DK++IF+ + + IEQ L G +G++ + + ++L ++K T + + Sbjct: 417 QRSKDKILIFALYKKEAQRIEQTLRRGGFKVSGIHGDLGQNERIASLERFKSAETPLLVA 476 Query: 478 MDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT 353 D AA GLD+ V HV + + ++E+ V HR+G T Sbjct: 477 TD-VAARGLDIPNVEHV--VNYTFPLTIEDYV----HRIGRT 511
>STH1_YEAST (P32597) Nuclear protein STH1/NPS1 (EC 3.6.1.-) (ATP-dependent| helicase STH1) (Chromatin structure remodeling complex protein STH1) (SNF2 homolog) Length = 1359 Score = 40.0 bits (92), Expect = 0.007 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 3/120 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYK---EDPTCMALLMD 473 +V++F Q + + ++E L + + Y + + L + D C LL Sbjct: 809 RVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF-LLST 867 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LGL+L + V + + W+ + Q RAHR+G + + L ++EE +L+ Sbjct: 868 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILE 927
>SNF2_YEAST (P22082) Transcription regulatory protein SNF2 (EC 3.6.1.-)| (ATP-dependent helicase SNF2) (SWI/SNF complex component SNF2) (Regulatory protein SWI2) (Regulatory protein GAM1) (Transcription factor TYE3) Length = 1703 Score = 40.0 bits (92), Expect = 0.007 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 3/120 (2%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMAL---LMD 473 +V+IF Q + + ++E L I Y + +RS L + P L L Sbjct: 1105 RVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTK-SDERSELLRLFNAPDSEYLCFILST 1163 Query: 472 GTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 LGL+L + V + + W+ + Q RAHR+G + + L ++EE +L+ Sbjct: 1164 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILE 1223
>SMAL1_HUMAN (Q9NZC9) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A-like protein 1 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 1) (HepA-related protein) (hHARP) Length = 954 Score = 39.3 bits (90), Expect = 0.012 Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 1/123 (0%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYK-EDPTCMALLMDG 470 +K ++F+ + I Q+L + + + + +++ + +A+L Sbjct: 726 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT 785 Query: 469 TAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQL 290 A +GL S + V E W+ + Q R HR+G T + + L +GT ++ + L Sbjct: 786 AANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPL 845 Query: 289 LQD 281 +Q+ Sbjct: 846 IQE 848
>DBP10_USTMA (Q4P3W3) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 1154 Score = 38.1 bits (87), Expect = 0.026 Identities = 25/102 (24%), Positives = 46/102 (45%) Frame = -1 Query: 658 QTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALL 479 + LP + IIF H+ + LT G + +YS + T+ +++++ + ++ Sbjct: 465 ELLPHQTIIFCATKHHVEYLLLLLTTTGYACSHIYSSLDQATRGIQMSRFRRGQNSLLIV 524 Query: 478 MDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT 353 D AA G+DL + HV + Q + HR+G T Sbjct: 525 TD-VAARGIDLPVLEHVVNFD------FPPQPRTFVHRVGRT 559
>SMAL1_BOVIN (Q9TTA5) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A-like protein 1 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 1) (DNA-dependent ATPase A) (HepA-related protein) Length = 941 Score = 37.7 bits (86), Expect = 0.034 Identities = 23/122 (18%), Positives = 52/122 (42%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 +K ++F+ + I ++L + + + + ++ + + +L Sbjct: 723 EKFLVFAHHKVVLDAITKELERKRVQHIRIDGSTSSADRETSASSFSCPRALRGVLSITA 782 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQLL 287 A +GL S + V E W+ + Q R HR+G +++ L RGT ++ + L+ Sbjct: 783 ANMGLTFSSADLVVFGELFWNPGVLMQAEDRVHRIGQLSSVSIHYLVARGTADDYLWPLI 842 Query: 286 QD 281 Q+ Sbjct: 843 QE 844
>DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 535 Score = 37.0 bits (84), Expect = 0.058 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 DKV+IF+ + + +E+ L G A ++ + + AL+++K T LL Sbjct: 372 DKVLIFALYKKEASRVERNLKYNGYNVAAIHGDLSQQQRTQALSEFKAG-TANLLLATDV 430 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQV--ISRAHRMGAT 353 AA GLD+ V V + + ++E+ V I R R GAT Sbjct: 431 AARGLDIPNVKTVINL--TFPLTVEDYVHRIGRTGRAGAT 468
>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 504 Score = 36.2 bits (82), Expect = 0.098 Identities = 29/101 (28%), Positives = 48/101 (47%) Frame = -1 Query: 655 TLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLM 476 T DKV+IF+ + + +E+ L G A ++ + + AL ++K C LL Sbjct: 338 TKNDKVLIFALYKKEASRVERNLKYNGYDVAAIHGDLSQQQRTQALNEFKAG-KCNLLLA 396 Query: 475 DGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT 353 AA GLD+ V V + + ++E+ V HR+G T Sbjct: 397 TDVAARGLDIPNVKTVINL--TFPLTVEDYV----HRIGRT 431
>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 540 Score = 35.0 bits (79), Expect = 0.22 Identities = 27/98 (27%), Positives = 48/98 (48%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 DKV+IF+ + + +E+ L G A ++ + + AL ++K + + L D Sbjct: 377 DKVLIFALYKKEASRVERNLNYNGYKVAAIHGDLSQQQRTQALNEFKSGKSNLLLATD-V 435 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT 353 AA GLD+ V V + + ++E+ V HR+G T Sbjct: 436 AARGLDIPNVKTVINL--TFPLTVEDYV----HRIGRT 467
>NTP1_MYXVL (Q9Q8L4) Nucleoside triphosphatase I (EC 3.6.1.15) (Nucleoside| triphosphate phosphohydrolase I) (NPH I) (M86L protein) Length = 632 Score = 35.0 bits (79), Expect = 0.22 Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 22/147 (14%) Frame = -1 Query: 649 PDKVIIFSQFLEH--IHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDP------- 497 P K ++F F+ I+++ + I+Y +S T+ ++ ++ + Sbjct: 379 PGKCLVFEPFVNQSGINILLLYFSAFNISYIE-FSSRTKNTRVQSVAEFNKRENTDGDLI 437 Query: 496 -TCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGA-------TRPIN 341 TC+ L G G+ +N +F+++ W+ + Q+I RA R+ + R +N Sbjct: 438 KTCVFSLSGGE---GISFFSINDIFILDMTWNEASLRQIIGRAIRLNSHVLTPEHRRYVN 494 Query: 340 VETLAMR-----GTIEEQMLQLLQDTS 275 V + R T++E +L +++ S Sbjct: 495 VHFIVARLSNGDATVDEDLLDIIRTKS 521
>NTP1_MCV1 (Q98267) Nucleoside triphosphatase I (EC 3.6.1.15) (Nucleoside| triphosphate phosphohydrolase I) (NPH I) Length = 634 Score = 35.0 bits (79), Expect = 0.22 Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 22/145 (15%) Frame = -1 Query: 649 PDKVIIFSQF--LEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDP------- 497 P K ++F F L I + + L + GI+Y +S T+ A+ ++ Sbjct: 378 PGKCLVFEPFINLSGIRIFVKYLEVFGISYIE-FSSRTKDTRTRAVAEFNRVENTNGELI 436 Query: 496 -TCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGA-------TRPIN 341 TC+ L G+ +N +F+++ W+ + +Q+I RA R+ + R +N Sbjct: 437 KTCVFSLSGNE---GISFLSINDIFILDMTWNEASLKQIIGRAIRLHSHANNPPERRYVN 493 Query: 340 VE-TLAMRG----TIEEQMLQLLQD 281 V +A G ++++ +L+++Q+ Sbjct: 494 VHFVVAQLGSGAPSVDDDLLEIIQN 518
>SRMB_ECOLI (P21507) ATP-dependent RNA helicase srmB (EC 3.6.1.-)| Length = 444 Score = 34.7 bits (78), Expect = 0.29 Identities = 28/104 (26%), Positives = 45/104 (43%) Frame = -1 Query: 664 LPQTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMA 485 L Q + I+F + E +H + L AGI + M G + A+ + E + Sbjct: 243 LKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVNVL 302 Query: 484 LLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT 353 + D AA G+D+ V+HVF + M + HR+G T Sbjct: 303 VATD-VAARGIDIPDVSHVFNFD------MPRSGDTYLHRIGRT 339
>NTP1_FOWPV (O72907) Nucleoside triphosphatase I (EC 3.6.1.15) (Nucleoside| triphosphate phosphohydrolase I) (NPH I) Length = 637 Score = 34.7 bits (78), Expect = 0.29 Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 18/141 (12%) Frame = -1 Query: 643 KVIIFSQFLEH--IHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT----CMAL 482 K ++F F+ I ++ Q + GITY S +S K D T Sbjct: 383 KCLVFEPFIRSSGIEILLQYFNVFGITYIEFSSRTKDIRSKSVSDFNKVDNTDGEITKVC 442 Query: 481 LMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGA-------TRPINV----- 338 + + G+ +N +F+++ W+ + +Q+I RA R+ + R +NV Sbjct: 443 VFSQSGNEGISFLSINDIFILDMTWNEASLKQIIGRAIRLNSHVNNPPERRYVNVYFVVA 502 Query: 337 ETLAMRGTIEEQMLQLLQDTS 275 + + R ++++ +L ++Q S Sbjct: 503 KLSSGRSSVDDILLDIIQSKS 523
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 34.3 bits (77), Expect = 0.37 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Frame = -1 Query: 691 QDDNNPQTRLPQTL-PDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALT 515 Q+ + TRL P+ I+F + + + + L I G G++ + + L Sbjct: 224 QEKFDTMTRLMDVAQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLR 283 Query: 514 KYKEDPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT 353 +K + + D AA GLD+S V HV+ + + + S HR+G T Sbjct: 284 DFKNGNLDVLVATD-VAARGLDISGVTHVY------NYDIPQDPESYVHRIGRT 330
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 34.3 bits (77), Expect = 0.37 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Frame = -1 Query: 691 QDDNNPQTRLPQTL-PDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALT 515 Q+ + TRL P+ I+F + + + + L I G G++ + + L Sbjct: 224 QEKFDTMTRLMDVAQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLR 283 Query: 514 KYKEDPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT 353 +K + + D AA GLD+S V HV+ + + + S HR+G T Sbjct: 284 DFKNGNLDVLVATD-VAARGLDISGVTHVY------NYDIPQDPESYVHRIGRT 330
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 33.9 bits (76), Expect = 0.49 Identities = 18/73 (24%), Positives = 37/73 (50%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 D+ ++F H + + L G++ A +YS + ++ L K+ + C L++ Sbjct: 338 DQTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHN-KCSTLIVTDL 396 Query: 466 AALGLDLSFVNHV 428 AA GLD+ +++V Sbjct: 397 AARGLDIPLLDNV 409
>SPB4_YARLI (Q6C193) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 626 Score = 33.5 bits (75), Expect = 0.64 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = -1 Query: 562 GMYSPMPLGTKRSALTKYKEDPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQV 383 G++ +P T+ L KY++ L+ AA GLD+ V+ V ++P D + Sbjct: 315 GLHGKLPSSTRIKILNKYQKTGAQAILMTTDIAARGLDIPEVDLVVQLDPPSDADTFQHR 374 Query: 382 ISRAHRMG 359 RA R G Sbjct: 375 CGRAGRAG 382
>Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)| Length = 778 Score = 33.5 bits (75), Expect = 0.64 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 7/127 (5%) Frame = -1 Query: 664 LPQTLPDKVIIFSQFLEHIHVIEQQLT---IAGITYAGMYSPMPLGTKRS----ALTKYK 506 L + +++IIF+Q+ + + I LT I I + G + G + A+ ++K Sbjct: 347 LEKNKDERIIIFAQYRDTVEKIVNLLTQNGIKAIRFIGQANKEGKGMSQKEQIEAIERFK 406 Query: 505 EDPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLA 326 ++ + L+ + G+D+ VN++ EP+ E + I R R V L Sbjct: 407 KEGS--VLVSTSVSEEGIDIPSVNYIIFYEPV---PSEIRFIQRRGRAMRGEGGKVYVLI 461 Query: 325 MRGTIEE 305 +GT +E Sbjct: 462 AKGTADE 468
>SMAL1_CAEEL (Q8MNV7) Putative SMARCAL1-like protein (EC 3.6.1.-)| Length = 690 Score = 33.1 bits (74), Expect = 0.83 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 1/127 (0%) Frame = -1 Query: 661 PQTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMAL 482 P P KV+IF+ + I+ ++ + + P + + ++ D Sbjct: 489 PDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIRVA 548 Query: 481 LMDGTAA-LGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEE 305 ++ TAA +G+ L+ + V E ++ Q RAHR+G + V+ L + T ++ Sbjct: 549 VLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADD 608 Query: 304 QMLQLLQ 284 M ++Q Sbjct: 609 VMWNMVQ 615
>DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 802 Score = 33.1 bits (74), Expect = 0.83 Identities = 20/85 (23%), Positives = 41/85 (48%) Frame = -1 Query: 682 NNPQTRLPQTLPDKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE 503 N P+ P + P + I+F H+ + + L G + +YS + ++ L ++ Sbjct: 295 NQPEPADPSSAP-QAIVFVATKHHVDYVAELLRTTGYRTSLIYSSLDQVARQQQLAGFRS 353 Query: 502 DPTCMALLMDGTAALGLDLSFVNHV 428 + + ++ D AA GLD+ ++HV Sbjct: 354 HQSDVLVVTD-VAARGLDIPIMDHV 377
>ABLM1_MOUSE (Q8K4G5) Actin-binding LIM protein 1 (Actin-binding LIM protein| family member 1) (abLIM-1) Length = 861 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +1 Query: 391 PPYSYPIWVPSEKH--DSQNSNQDPVLRCHPSVKPCMLDPLYTSSMHFS*CLKAWDC 555 P + + PS H D +S++ PV+ CH +PC + L + HF +K + C Sbjct: 71 PELRFSSYDPSVAHPQDPHHSSEKPVIHCHKCGEPCKGEVLRVQTKHFH--IKCFTC 125
>PANB_STRCO (Q9RKS2) 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC| 2.1.2.11) (Ketopantoate hydroxymethyltransferase) Length = 291 Score = 32.3 bits (72), Expect = 1.4 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 2/142 (1%) Frame = -1 Query: 601 IEQQLTIAGITYAGMYSPM-PLGTKRSALTKYKEDPTCMALLMDGTAALGLDLSFVNHVF 425 I +++T+ IT A P+ T A+T D + + +++ G +A L + V Sbjct: 26 INRRITVRDITAAKERGEKWPMLTAYDAMTASVFDESGIPVMLVGDSAGNCHLGYETTV- 84 Query: 424 LMEPIWDRSMEEQ-VISRAHRMGATRPINVETLAMRGTIEEQMLQLLQDTSACRNMVNKG 248 P+ +++E ++S A G +R + V L G+ +E +Q L+ SA R + G Sbjct: 85 ---PV---TLDEMTMLSAAVVRGTSRALIVGDLPF-GSYQEGPVQALR--SATRLVKEAG 135 Query: 247 ASGTENEGGARPHRSLHDFAES 182 + EGG R HR + ES Sbjct: 136 VGAVKLEGGERSHRQIELLVES 157
>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (mDomino) Length = 3072 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 1/118 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCM-ALLMDGT 467 +V+I SQ + + ++E L +TY + ++ + + D ALL + Sbjct: 1832 RVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHS 1891 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 A G++L + V + + M+ + R+G + I++ L +IEE++L+ Sbjct: 1892 RATGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 1949
>MA2B2_PIG (Q28949) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) (AMAN) Length = 995 Score = 32.0 bits (71), Expect = 1.9 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 14/133 (10%) Frame = +2 Query: 62 KTKETNKQLLAT--LQFILA------LACIHACRRVRSLHKGEFRQIATFSEIV*ATVRP 217 K K+ +QLLA L+F+L A H ++ L +G TF +RP Sbjct: 91 KRKQQVRQLLAEQRLEFVLGGQVMHDEAVTHFDDQILQLTEGHGFLYETFG------IRP 144 Query: 218 SPSFIL---GAACTFVNHISASA---SVLQKLEHLLLDGAAHGQGLNIYWTGCTHSMRAT 379 S+ + GA+ T ++ + ++ ++++ L D H QGL W G + S+ A Sbjct: 145 QFSWQVDPFGASATTPTLLALAGFNGHIISRIDYDLKDTMQHTQGLQFVWRG-SRSLEAR 203 Query: 380 NNLFLHTPIPYGF 418 +F H Y + Sbjct: 204 QEIFTHVLDQYSY 216
>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) (ATP-dependent RNA helicase DP97) Length = 881 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/73 (24%), Positives = 36/73 (49%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 D+ ++F H + + LT ++ A +YS + ++ L K+ C L++ Sbjct: 339 DQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLG-KCSTLIVTDL 397 Query: 466 AALGLDLSFVNHV 428 AA GLD+ +++V Sbjct: 398 AARGLDIPLLDNV 410
>NTP1_AMEPV (P29814) Nucleoside triphosphatase I (EC 3.6.1.15) (Nucleoside| triphosphate phosphohydrolase I) (NPH I) Length = 648 Score = 32.0 bits (71), Expect = 1.9 Identities = 30/147 (20%), Positives = 64/147 (43%), Gaps = 18/147 (12%) Frame = -1 Query: 643 KVIIFSQFL--EHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKE-----DPTCMA 485 KV+IF + E I ++ I+Y YS L T+ + L +Y Sbjct: 391 KVLIFEPLVNFEGISSLKCYFNCFNISYIE-YSSKTLKTRDNELNEYNNYENNNGKKVKV 449 Query: 484 LLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGA-------TRPINVETLA 326 + + G+ +N + +++ W+ S +Q+I R+ R+ + R +NV L Sbjct: 450 CIFSYAGSEGISFKCINDIIILDMPWNESELKQIIGRSIRLNSHKDLPQEYRYVNVHFLI 509 Query: 325 M----RGTIEEQMLQLLQDTSACRNMV 257 R ++++++L +++D N++ Sbjct: 510 SYTNNRKSVDKEILDIIKDKQGKINVI 536
>NTP1_SFVKA (Q9Q8Z2) Nucleoside triphosphatase I (EC 3.6.1.15) (Nucleoside| triphosphate phosphohydrolase I) (NPH I) Length = 632 Score = 31.6 bits (70), Expect = 2.4 Identities = 29/147 (19%), Positives = 65/147 (44%), Gaps = 22/147 (14%) Frame = -1 Query: 649 PDKVIIFSQFLEH--IHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDP------- 497 P K ++F F+ I+++ + I+Y +S T+ ++ ++ + Sbjct: 379 PGKCLVFEPFVNQSGINILLLYFSAFNISYIE-FSSRTKNTRVQSVAEFNKRENTNGDLI 437 Query: 496 -TCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGA-------TRPIN 341 TC+ L G G+ +N +F+++ W+ + Q+I RA R+ + R + Sbjct: 438 KTCVFSLSGGE---GISFFSINDIFILDMTWNEASLRQIIGRAIRLNSHVLTPEHRRYVY 494 Query: 340 VETLAMR-----GTIEEQMLQLLQDTS 275 V + R T++E +L ++++ S Sbjct: 495 VHFIIARLSNGDPTVDEDLLDIIRNKS 521
>DBP3_DEBHA (Q6BZ77) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 527 Score = 31.6 bits (70), Expect = 2.4 Identities = 28/98 (28%), Positives = 46/98 (46%) Frame = -1 Query: 646 DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCMALLMDGT 467 DKV+IF+ + + IE L + ++ + + SAL +K T + L D Sbjct: 364 DKVLIFALYKKEATRIENLLVRNSFKVSAVHGDLSQQQRTSALGAFKAGKTTLLLATD-V 422 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT 353 AA GLD+ V V + + ++E+ V HR+G T Sbjct: 423 AARGLDIPNVKVVINL--TFPLTVEDYV----HRIGRT 454
>RAPA_VIBVY (Q7MHE6) RNA polymerase-associated protein rapA (EC 3.6.1.-)| (ATP-dependent helicase hepA) Length = 969 Score = 31.2 bits (69), Expect = 3.2 Identities = 16/68 (23%), Positives = 33/68 (48%) Frame = -1 Query: 508 KEDPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETL 329 +E+ L+ + G + F N + + + ++ + EQ I R R+G R I++ Sbjct: 554 QEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDIDIHVP 613 Query: 328 AMRGTIEE 305 ++GT +E Sbjct: 614 YLQGTAQE 621
>RAPA_VIBVU (Q8DCG1) RNA polymerase-associated protein rapA (EC 3.6.1.-)| (ATP-dependent helicase hepA) Length = 969 Score = 31.2 bits (69), Expect = 3.2 Identities = 16/68 (23%), Positives = 33/68 (48%) Frame = -1 Query: 508 KEDPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETL 329 +E+ L+ + G + F N + + + ++ + EQ I R R+G R I++ Sbjct: 554 QEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDIDIHVP 613 Query: 328 AMRGTIEE 305 ++GT +E Sbjct: 614 YLQGTAQE 621
>M4K3_RAT (Q924I2) Mitogen-activated protein kinase kinase kinase kinase 3| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3) (Germinal center kinase-related protein kinase) (GLK) (Fragment) Length = 862 Score = 31.2 bits (69), Expect = 3.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 388 VPPYSYPIWVPSEKHDSQNSNQDPVLRCHPSVKP 489 +PP I +P + H S++SNQ + RC S P Sbjct: 403 LPPKPKSISIPQDTHSSEDSNQGTIKRCPSSGSP 436
>M4K3_HUMAN (Q8IVH8) Mitogen-activated protein kinase kinase kinase kinase 3| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3) (Germinal center kinase-related protein kinase) (GLK) Length = 894 Score = 30.8 bits (68), Expect = 4.1 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 388 VPPYSYPIWVPSEKHDSQNSNQDPVLRCHPSVKP 489 +PP I++P E H +++ NQ + RC S P Sbjct: 435 LPPKPKSIFIPQEMHSTEDENQGTIKRCPMSGSP 468
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 30.8 bits (68), Expect = 4.1 Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 13/148 (8%) Frame = -1 Query: 670 TRLPQTLP-DKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPT 494 TR+ + P + +I+F + + I ++L G + A + +P + +T ++ Sbjct: 242 TRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDI 301 Query: 493 CMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT-------RPINVE 335 + + D AA GLD+ ++HV + D I R R G + P + Sbjct: 302 DILVATD-VAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELH 360 Query: 334 TL-----AMRGTIEEQMLQLLQDTSACR 266 L A R T+ E L ++D + R Sbjct: 361 LLKAIEKATRQTLTEAQLPTVEDVNTQR 388
>PANB_STRAW (Q82AW2) 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC| 2.1.2.11) (Ketopantoate hydroxymethyltransferase) Length = 287 Score = 30.8 bits (68), Expect = 4.1 Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 2/140 (1%) Frame = -1 Query: 595 QQLTIAGITYAGMYSPM-PLGTKRSALTKYKEDPTCMALLMDGTAALGLDLSFVNHVFLM 419 +++TI IT A P+ T A+T D + +++ G +A L + V Sbjct: 24 RRITIRDITTAKERGEKWPMLTAYDAMTASVFDEAGIPVMLVGDSAGNCHLGYETTV--- 80 Query: 418 EPIWDRSMEEQ-VISRAHRMGATRPINVETLAMRGTIEEQMLQLLQDTSACRNMVNKGAS 242 P+ +++E ++S A G +R + V L G+ +E +Q L+ SA R + G Sbjct: 81 -PV---TLDEMTMLSAAVVRGTSRALIVGDLPF-GSYQEGPVQALR--SATRLVKEAGVG 133 Query: 241 GTENEGGARPHRSLHDFAES 182 + EGG R HR + ES Sbjct: 134 AVKLEGGERSHRQIELLVES 153
>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) Length = 3160 Score = 30.8 bits (68), Expect = 4.1 Identities = 23/118 (19%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Frame = -1 Query: 643 KVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLGTKRSALTKYKEDPTCM-ALLMDGT 467 +V+I SQ + + ++E L +TY + ++ + + D A+L + Sbjct: 1916 RVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHS 1975 Query: 466 AALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLQ 293 G++L + V + + M+ + R+G + I++ L +IEE++L+ Sbjct: 1976 RTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 2033
>HISX_CORDI (P60858) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 449 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 8/51 (15%) Frame = -1 Query: 664 LPQTLPDKVIIFSQFL-EHI-------HVIEQQLTIAGITYAGMYSPMPLG 536 L LP VI+ + EH+ H + +Q+ AG + G YSP+PLG Sbjct: 326 LVDDLPTAVIVADAYAAEHLEIHTAESHKVAEQIRNAGAIFVGGYSPVPLG 376
>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)| Length = 515 Score = 30.4 bits (67), Expect = 5.4 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 Query: 424 EKHDSQNSNQDPVLRCHPSVKPCMLDPLYTSSMH 525 ++ DS NS+Q P HPS +P ML P +S H Sbjct: 88 QQEDSGNSSQSPTSP-HPSNQPAMLSPSTAASQH 120
>ANT_BPP1 (P19655) Antirepressor protein 1 (ant1) (Repressor bypass protein| B) (rebB) [Contains: Antirepressor protein 2 (ant2) (Repressor bypass protein A) (rebA)] Length = 322 Score = 30.4 bits (67), Expect = 5.4 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -1 Query: 691 QDDNNPQTRLPQTLPDKVIIFSQFLEHIHVIEQQLTIA 578 Q N+P +PQTLP+ + + ++ E +EQQL A Sbjct: 203 QQANSPAPSIPQTLPEALRLAAELAEQKMQLEQQLVAA 240
>SCG3_HUMAN (Q8WXD2) Secretogranin-3 precursor (Secretogranin III) (SgIII)| Length = 468 Score = 29.6 bits (65), Expect = 9.2 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 5/128 (3%) Frame = -1 Query: 535 TKRSALTKYKEDPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGA 356 TK K+++DP + L DGT D+ + E DR++ ++++S+ +G Sbjct: 123 TKSGLDHKFQDDPDGLHQL-DGTPLTAEDIVHKIAARIYEEN-DRAVFDKIVSKLLNLGL 180 Query: 355 TRPINVETLAMRGTIEEQMLQLLQ-----DTSACRNMVNKGASGTENEGGARPHRSLHDF 191 T + T+E+++ ++LQ + + NK S TEN+ G P + Sbjct: 181 I------TESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMA 234 Query: 190 AESSYLAK 167 A LAK Sbjct: 235 AIQDGLAK 242
>NU5M_PODAN (P20679) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 652 Score = 29.6 bits (65), Expect = 9.2 Identities = 13/30 (43%), Positives = 23/30 (76%) Frame = +3 Query: 333 VSTFIGRVAPIRCARLITCSSILLSHMGSI 422 VS F+GR ++ A+LITCS+++++ + SI Sbjct: 15 VSGFLGRKVGVKGAQLITCSNVVITTILSI 44
>RAPA_VIBPA (Q87LD0) RNA polymerase-associated protein rapA (EC 3.6.1.-)| (ATP-dependent helicase hepA) Length = 969 Score = 29.6 bits (65), Expect = 9.2 Identities = 15/65 (23%), Positives = 31/65 (47%) Frame = -1 Query: 508 KEDPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETL 329 +E+ L+ + G + F N + + + ++ + EQ I R R+G R I++ Sbjct: 554 QEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQNRDIDIHVP 613 Query: 328 AMRGT 314 ++GT Sbjct: 614 YLKGT 618
>HISX_CORJK (Q4JW59) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 450 Score = 29.6 bits (65), Expect = 9.2 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -1 Query: 616 EHIHVIEQQLTIAGITYAGMYSPMPLG 536 E H + Q+T AG + G +SP+PLG Sbjct: 346 EDAHGVAAQITNAGAIFIGRFSPVPLG 372
>GAT6A_XENLA (Q91678) GATA-binding factor 6-A (Transcription factor xGATA-6A)| Length = 391 Score = 29.6 bits (65), Expect = 9.2 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = +2 Query: 215 PSPSFILGAACTFVNHISAS--ASVLQKLEHLLLDGAAHG-QGLNIYWTGCTHSMRATNN 385 PSP + +A + ++ S S+L + +L GA+ G +N +W+ T + NN Sbjct: 18 PSPGTFMHSAASSPVYVPTSRVGSMLTSISYLQGTGASQGAHSVNSHWSQATSESSSFNN 77 Query: 386 LFLHTPIPYGFHQKNMIH 439 HT Y + +H Sbjct: 78 SSPHTSSRYHYPPSPPMH 95 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,460,818 Number of Sequences: 219361 Number of extensions: 2150937 Number of successful extensions: 5244 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 5043 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5207 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
