>DOCK8_HUMAN (Q8NF50) Dedicator of cytokinesis protein 8|
          Length = 2031

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 21/86 (24%), Positives = 39/86 (45%)
 Frame = +1

Query: 343  VPTSVAALATLPNALVTHDALVKTYLFFMMADPALLTVCSAAASADLVLSETWNFWSISL 522
            +PT ++        L +H+  +   LFFM AD A  + C + +S +     ++    I+ 
Sbjct: 1018 LPTLISMRLEFLRILCSHEHYLNLNLFFMNADTAPTSPCPSISSQNSSSCSSFQDQKIAS 1077

Query: 523  TFSLTTVVPKVNFSLSPIFLSMEATL 600
             F LT+   + +F    +F  + A L
Sbjct: 1078 MFDLTSEYRQQHFLTGLLFTELAAAL 1103

>MMPL7_MYCTU (P65370) Putative membrane protein mmpL7|
          Length = 920

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
 Frame = -3

Query: 623 GFTSTATAKVASIDKKIGLSEKFTLGTTVVNEKVKEMDQKFQVSDKTKSALAAAEQTVSN 444
           GFT+     + +  +K+   E + +  T +NE     D+   +S +T SAL++A + V+ 
Sbjct: 574 GFTNCPDDVLCTAMRKV--IEPYDIVVTGMNELSTGADRISAISTQTMSALSSAPRMVAQ 631

Query: 443 AGSAIMKNR-YVFTSASWVTSAFGKVAKAATDVGTMTKEKMSAEEQQKGSGG 291
             SA+ + R +V    + +  A  ++A+A+  +     + +SA+    G GG
Sbjct: 632 MRSALAQVRSFVPKLETTIQDAMPQIAQASAML-----KNLSADFADTGEGG 678

>MMPL7_MYCBO (P65371) Putative membrane protein mmpL7|
          Length = 920

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
 Frame = -3

Query: 623 GFTSTATAKVASIDKKIGLSEKFTLGTTVVNEKVKEMDQKFQVSDKTKSALAAAEQTVSN 444
           GFT+     + +  +K+   E + +  T +NE     D+   +S +T SAL++A + V+ 
Sbjct: 574 GFTNCPDDVLCTAMRKV--IEPYDIVVTGMNELSTGADRISAISTQTMSALSSAPRMVAQ 631

Query: 443 AGSAIMKNR-YVFTSASWVTSAFGKVAKAATDVGTMTKEKMSAEEQQKGSGG 291
             SA+ + R +V    + +  A  ++A+A+  +     + +SA+    G GG
Sbjct: 632 MRSALAQVRSFVPKLETTIQDAMPQIAQASAML-----KNLSADFADTGEGG 678

>RL7_XANAC (Q8PNT1) 50S ribosomal protein L7/L12|
          Length = 121

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
 Frame = -3

Query: 536 VNEKVKEMDQKFQVSDKTKSALAAA-------EQT-----VSNAGSAIMKNRYVFTSASW 393
           V E VK +++KF VS     A AAA       EQT     ++N G+       V  +   
Sbjct: 20  VMELVKAIEEKFGVSAAAPVAAAAAGPAAVVEEQTEFNVVLTNCGT---NKVGVIKAVRA 76

Query: 392 VTSAFGKVAKAATDVGTMTKEKMSAEEQQK 303
           VT    K AK  T+ G M KE  S +E +K
Sbjct: 77  VTGLGLKEAKDLTEAGGMLKEGASKDEAEK 106

>JTB_HUMAN (O76095) Protein JTB precursor (Jumping translocation breakpoint|
           protein) (Prostate androgen-regulated protein) (PAR
           protein)
          Length = 146

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
 Frame = +1

Query: 106 IPCSSTKRNKILGCRS-------LSHMEGVI*CVLYI*SCFLI 213
           I CSS+KRN+   CRS           EG + CV  I +C +I
Sbjct: 83  ITCSSSKRNEFKSCRSALMEQRLFWKFEGAVVCVALIFACLVI 125

>PRDM8_HUMAN (Q9NQV8) PR domain zinc finger protein 8 (PR domain-containing|
           protein 8)
          Length = 689

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = -3

Query: 386 SAFGKVAKAAT-----DVGTMTKEKMSAEEQQKGSGGSSYTPIR*SP 261
           SAF +V KAA      + GT     +++E+Q  G GG S TP   SP
Sbjct: 384 SAFVEVKKAARAASLQEEGTADGAGVASEDQDAGGGGGSSTPAAASP 430


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,972,937
Number of Sequences: 219361
Number of extensions: 1775918
Number of successful extensions: 5633
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5632
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)